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PDB: 111 results

7LAW
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BU of 7law by Molmil
crystal structure of GITR complex with GITR-L
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Tumor necrosis factor ligand superfamily member 18, Tumor necrosis factor receptor superfamily member 18
Authors:Longenecker, K.L, Rogers, B, Bigelow, L, Judge, R.A, Alvarez, H.
Deposit date:2021-01-07
Release date:2022-03-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.752 Å)
Cite:An anti-PD-1-GITR-L bispecific agonist induces GITR clustering-mediated T cell activation for cancer immunotherapy.
Nat Cancer, 3, 2022
6E6J
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BU of 6e6j by Molmil
BRD2_Bromodomain2 complex with inhibitor 744
Descriptor: Bromodomain-containing protein 2, N-ethyl-4-[2-(4-fluoro-2,6-dimethylphenoxy)-5-(2-hydroxypropan-2-yl)phenyl]-6-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridine-2-carboxamide
Authors:Longenecker, K.L, Park, C.H, Bigelow, L.
Deposit date:2018-07-25
Release date:2019-07-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Selective inhibition of the BD2 bromodomain of BET proteins in prostate cancer.
Nature, 578, 2020
2A5Z
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BU of 2a5z by Molmil
Crystal Structure of Protein of Unknown Function SO2946 from Shewanella oneidensis MR-1
Descriptor: MAGNESIUM ION, hypothetical protein SO2946
Authors:Nocek, B, Bigelow, L, Abdullah, J, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-07-01
Release date:2005-08-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.015 Å)
Cite:Structure of SO2946 orphan from Shewanella oneidensis shows "jelly-roll" fold with carbohydrate-binding module.
J.STRUCT.FUNCT.GENOM., 9, 2008
3BS3
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BU of 3bs3 by Molmil
Crystal structure of a putative DNA-binding protein from Bacteroides fragilis
Descriptor: 1,2-ETHANEDIOL, Putative DNA-binding protein, SULFATE ION
Authors:Cuff, M.E, Bigelow, L, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-12-21
Release date:2008-01-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The structure of a putative DNA-binding protein from Bacteroides fragilis.
TO BE PUBLISHED
6NTR
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BU of 6ntr by Molmil
Crystal Structure of Beta-barrel-like Protein of Domain of Unknown Function DUF1849 from Brucella abortus
Descriptor: 1,2-ETHANEDIOL, ATP/GTP-binding site-containing protein A, GLYCEROL
Authors:Kim, Y, Bigelow, L, Endres, M, Babnigg, G, Crosson, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2019-01-30
Release date:2019-02-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:BrucellaPeriplasmic Protein EipB Is a Molecular Determinant of Cell Envelope Integrity and Virulence.
J.Bacteriol., 201, 2019
6AZY
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BU of 6azy by Molmil
Crystal structure of Hsp104 R328M/R757M mutant from Calcarisporiella thermophila
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Heat shock protein Hsp104
Authors:Michalska, K, Bigelow, L, Hatzos-Skintges, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2017-09-13
Release date:2018-10-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of Calcarisporiella thermophila Hsp104 Disaggregase that Antagonizes Diverse Proteotoxic Misfolding Events.
Structure, 27, 2019
5I2H
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BU of 5i2h by Molmil
Crystal structure of O-methyltransferase family 2 protein Plim_1147 from Planctomyces limnophilus DSM 3776 complex with Apigenin
Descriptor: 1,2-ETHANEDIOL, 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one, FORMIC ACID, ...
Authors:Chang, C, Duke, N, Bigelow, L, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2016-02-08
Release date:2016-03-02
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Crystal structure of O-methyltransferase family 2 protein Plim_1147 from Planctomyces limnophilus DSM 3776 complex with Apigenin.
To Be Published
6ONY
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BU of 6ony by Molmil
BRD2_Bromodomain1 complex with inhibitor 744
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, N-ethyl-4-[2-(4-fluoro-2,6-dimethylphenoxy)-5-(2-hydroxypropan-2-yl)phenyl]-6-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridine-2-carboxamide
Authors:Longenecker, K.L, Bigelow, L.
Deposit date:2019-04-22
Release date:2020-01-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Selective inhibition of the BD2 bromodomain of BET proteins in prostate cancer.
Nature, 578, 2020
6QKY
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BU of 6qky by Molmil
Tryptophan synthase subunit alpha from Streptococcus pneumoniae with 3D domain swap in the core of TIM barrel
Descriptor: ACETIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Michalska, K, Kowiel, M, Bigelow, L, Endres, M, Gilski, M, Jaskolski, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-01-30
Release date:2019-03-27
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:3D domain swapping in the TIM barrel of the alpha subunit of Streptococcus pneumoniae tryptophan synthase.
Acta Crystallogr D Struct Biol, 76, 2020
5CQF
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BU of 5cqf by Molmil
Crystal structure of L-lysine 6-monooxygenase from Pseudomonas syringae
Descriptor: IODIDE ION, L-lysine 6-monooxygenase
Authors:Michalska, K, Bigelow, L, Jedrzejczak, R, Weerth, R.S, Cao, H, Yennamalli, R, Phillips Jr, G.N, Thomas, M.G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-07-21
Release date:2015-09-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of L-lysine 6-monooxygenase from Pseudomonas syringae
To Be Published
5K0M
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BU of 5k0m by Molmil
Targeting the PRC2 complex through a novel protein-protein interaction inhibitor of EED
Descriptor: (3R,4S)-1-[(1S)-7-fluoro-2,3-dihydro-1H-inden-1-yl]-N,N-dimethyl-4-{4-[4-(methylsulfonyl)piperazin-1-yl]phenyl}pyrrolidin-3-amine, Polycomb protein EED
Authors:Jakob, C.G, Bigelow, L.J, Zhu, H, Sun, C.
Deposit date:2016-05-17
Release date:2017-01-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:The EED protein-protein interaction inhibitor A-395 inactivates the PRC2 complex.
Nat. Chem. Biol., 13, 2017
2BBE
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BU of 2bbe by Molmil
Crystal structure of protein SO0527 from Shewanella oneidensis
Descriptor: SULFATE ION, hypothetical protein SO0527
Authors:Chang, C, Bigelow, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-10-17
Release date:2005-11-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of protein SO0527 from Shewanella oneidensis
To be Published
2FG1
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BU of 2fg1 by Molmil
Structure of a Protein of Unknown Function from Bacteroides thetaiotaomicron.
Descriptor: conserved hypothetical protein BT1257
Authors:Cuff, M.E, Bigelow, L, Abdullah, J, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-12-20
Release date:2006-03-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure of a hypothetical protein from Bacteroides thetaiotaomicron.
To be Published
5KIN
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BU of 5kin by Molmil
Crystal structure of tryptophan synthase alpha beta complex from Streptococcus pneumoniae
Descriptor: GLYCEROL, Tryptophan synthase alpha chain, Tryptophan synthase beta chain
Authors:Chang, C, Michalska, K, Bigelow, L, Jedrzejczak, R, ANDERSON, W.F, JOACHIMIAK, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-06-16
Release date:2016-07-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Conservation of the structure and function of bacterial tryptophan synthases.
Iucrj, 6, 2019
2R5R
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BU of 2r5r by Molmil
The crystal structure of DUF198 from Nitrosomonas europaea ATCC 19718
Descriptor: IMIDAZOLE, PHOSPHATE ION, UPF0343 protein NE1163
Authors:Tan, K, Wu, R, Nocek, B, Bigelow, L, Patterson, S, Freeman, L, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-09-04
Release date:2007-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:The crystal structure of DUF198 from Nitrosomonas europaea ATCC 19718.
To be Published
4XR9
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BU of 4xr9 by Molmil
Crystal structure of CalS8 from Micromonospora echinospora cocrystallized with NAD and TDP-glucose
Descriptor: CalS8, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Michalska, K, Bigelow, L, Endres, M, Babnigg, G, Bingman, C.A, Yennamalli, R.M, Singh, S, Kharel, M.K, Thorson, J.S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-01-20
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of CalS8 from Micromonospora echinospora
To Be Published
4XRR
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BU of 4xrr by Molmil
Crystal structure of cals8 from micromonospora echinospora (P294S mutant)
Descriptor: CalS8, GLYCEROL
Authors:Michalska, K, Bigelow, L, Endres, M, Babnigg, G, Bingman, C.A, Yennamalli, R.M, Singh, S, Kharel, M.K, Thorson, J.S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-01-21
Release date:2015-02-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural Characterization of CalS8, a TDP-alpha-D-Glucose Dehydrogenase Involved in Calicheamicin Aminodideoxypentose Biosynthesis.
J. Biol. Chem., 290, 2015
4LPQ
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BU of 4lpq by Molmil
Crystal structure of the L,D-transpeptidase (residues 123-326) from Xylanimonas cellulosilytica DSM 15894
Descriptor: CHLORIDE ION, ErfK/YbiS/YcfS/YnhG family protein
Authors:Nocek, B, Bigelow, L, Endres, M, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-07-16
Release date:2013-11-13
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of the L,D-transpeptidase (residues 123-326) from Xylanimonas cellulosilytica DSM 15894
To be Published
5KCK
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BU of 5kck by Molmil
Crystal structure of anthranilate synthase component I from Streptococcus pneumoniae TIGR4
Descriptor: Anthranilate synthase component I, GLYCEROL
Authors:Chang, C, Michalska, K, Bigelow, L, Jedrzejczak, R, ANDERSON, W.F, JOACHIMIAK, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-06-06
Release date:2016-06-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of anthranilate synthase component I from Streptococcus pneumoniae TIGR4
To Be Published
5UC0
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BU of 5uc0 by Molmil
Crystal Structure of Beta-barrel-like, Uncharacterized Protein of COG5400 from Brucella abortus
Descriptor: CHLORIDE ION, PENTAETHYLENE GLYCOL, SULFATE ION, ...
Authors:Kim, Y, Bigelow, L, Endres, M, Babnigg, G, Crosson, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2016-12-21
Release date:2017-02-08
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Periplasmic protein EipA determines envelope stress resistance and virulence in Brucella abortus.
Mol. Microbiol., 2018
2R39
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BU of 2r39 by Molmil
Crystal structure of FixG-related protein from Vibrio parahaemolyticus
Descriptor: FixG-related protein
Authors:Chang, C, Bigelow, L, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-08-29
Release date:2007-09-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of FixG-related protein from Vibrio parahaemolyticus.
To be Published
2QSW
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BU of 2qsw by Molmil
Crystal structure of C-terminal domain of ABC transporter / ATP-binding protein from Enterococcus faecalis
Descriptor: GLYCEROL, Methionine import ATP-binding protein metN 2, ZINC ION
Authors:Osipiuk, J, Bigelow, L, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-07-31
Release date:2007-08-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray structure of C-terminal domain of ABC transporter / ATP-binding protein from Enterococcus faecalis.
To be Published
4RGU
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BU of 4rgu by Molmil
Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with ferulic acid
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, CHLORIDE ION, GLYCEROL, ...
Authors:Kim, Y, Joachimiak, G, Bigelow, L, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-30
Release date:2015-03-04
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.891 Å)
Cite:Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with ferulic acid
To be Published, 2014
5CJ3
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BU of 5cj3 by Molmil
Crystal structure of the zorbamycin binding protein (ZbmA) from Streptomyces flavoviridis with zorbamycin
Descriptor: CHLORIDE ION, COPPER (II) ION, Zbm binding protein, ...
Authors:Chang, C, Bigelow, L, Clancy, S, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Rudolf, J.D, Ma, M, Chang, C.-Y, Lohman, J.R, Yang, D, Shen, B, Enzyme Discovery for Natural Product Biosynthesis, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-07-13
Release date:2015-07-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6499 Å)
Cite:Crystal Structure of the Zorbamycin-Binding Protein ZbmA, the Primary Self-Resistance Element in Streptomyces flavoviridis ATCC21892.
Biochemistry, 54, 2015
5DU2
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BU of 5du2 by Molmil
Structural analysis of EspG2 glycosyltransferase
Descriptor: EspG2 glycosyltransferase
Authors:Michalska, K, Elshahawi, S.I, Bigelow, L, Babnigg, G, Thorson, J.S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-09-18
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural analysis of EspG2 glycosyltransferase
To Be Published

226707

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