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PDB: 85 results

5G3J
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BU of 5g3j by Molmil
Discovery of New Selective Glucocorticoid Receptor Agonist Leads
Descriptor: 1,2-ETHANEDIOL, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, 5-[[(1S,2R,4R)-4-ethyl-6,7-bis(fluoranyl)-2,5-bis(oxidanyl)-2-(trifluoromethyl)-3,4-dihydro-1H-naphthalen-1-yl]amino]-1H-quinolin-2-one, ...
Authors:Berger, M, Edman, K, Wissler, L, Neuhaus, R, Rehwinkel, H, Schacke, H, Jaroch, S.
Deposit date:2016-04-27
Release date:2017-02-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of New Selective Glucocorticoid Receptor Agonist Leads.
Bioorg.Med.Chem.Lett., 27, 2017
8ZRA
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BU of 8zra by Molmil
GerQ filaments from Bacillus amyloiquefaciens
Descriptor: Spore coat protein GerQ
Authors:Kreutzberger, M, Egelman, E, Cao, Q.
Deposit date:2024-06-04
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Molecular architecture of the assembly of Bacillus spore coat protein GerQ revealed by cryo-EM.
Nat Commun, 15, 2024
6X80
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BU of 6x80 by Molmil
Structure of the Campylobacter jejuni G508A Flagellar Filament
Descriptor: 5,7-diamino-3,5,7,9-tetradeoxy-L-glycero-alpha-L-manno-non-2-ulopyranosonic acid, Flagellin A
Authors:Kreutzberger, M.A.B, Wang, F, Egelman, E.H.
Deposit date:2020-06-01
Release date:2020-07-08
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Atomic structure of the Campylobacter jejuni flagellar filament reveals how epsilon Proteobacteria escaped Toll-like receptor 5 surveillance.
Proc.Natl.Acad.Sci.USA, 117, 2020
7PV5
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BU of 7pv5 by Molmil
RBD domain of D. melanogaster tRNA (uracil-5-)-methyltransferase homolog A (TRMT2A)
Descriptor: CHLORIDE ION, FI05218p, SODIUM ION, ...
Authors:Witzenberger, M, Janowski, R, Niessing, D.
Deposit date:2021-10-01
Release date:2023-04-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the RNA-recognition motif of Drosophila melanogaster tRNA (uracil-5-)-methyltransferase homolog A
Acta Crystallogr.,Sect.F, 80, 2024
7NTO
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BU of 7nto by Molmil
The structure of RRM domain of human TRMT2A at 1.23 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ...
Authors:Witzenberger, M, Janowski, R, Davydova, E, Niessing, D.
Deposit date:2021-03-10
Release date:2022-01-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Small-molecule modulators of TRMT2A decrease PolyQ aggregation and PolyQ-induced cell death.
Comput Struct Biotechnol J, 20, 2022
8FJS
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BU of 8fjs by Molmil
Structure of the Saccharolobus solfataricus archaeal type IV pilus at 3 Angstrom resolution
Descriptor: Pilin_N domain-containing protein
Authors:Kreutzberger, M.A, Wang, F, Krupovic, M, Egelman, E.H.
Deposit date:2022-12-20
Release date:2023-06-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FK0
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BU of 8fk0 by Molmil
Asymmetric cryo-EM structure of a curved Saccharolobus solfataricus type IV pilus
Descriptor: Pilin_N domain-containing protein
Authors:Kreutzberger, M.A, Wang, F, Krupovic, M, Egelman, E.H.
Deposit date:2022-12-20
Release date:2023-06-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
6C83
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BU of 6c83 by Molmil
Structure of Aurora A (122-403) bound to inhibitory Monobody Mb2 and AMPPCP
Descriptor: Aurora kinase A, Mb2 Monobody, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:Hoemberger, M, Kutter, S, Zorba, A, Nguyen, V, Shohei, A, Shohei, K, Kern, D.
Deposit date:2018-01-24
Release date:2019-02-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Allosteric modulation of a human protein kinase with monobodies.
Proc.Natl.Acad.Sci.USA, 116, 2019
8AGQ
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BU of 8agq by Molmil
Crystal structure of anthocyanin-related GSTF8 from Populus trichocarpa in complex with (-)-catechin and glutathione
Descriptor: (2~{S},3~{R})-2-[3,4-bis(oxidanyl)phenyl]-3,4-dihydro-2~{H}-chromene-3,5,7-triol, GLUTATHIONE, Glutathione transferase, ...
Authors:Eichenberger, M, Hueppi, S, Schwander, T, Mittl, P, Buller, M.R.
Deposit date:2022-07-20
Release date:2023-08-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.093 Å)
Cite:The catalytic role of glutathione transferases in heterologous anthocyanin biosynthesis.
Nat Catal, 6, 2023
7Z4N
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BU of 7z4n by Molmil
Plasmodium falciparum pyruvate kinase complexed with pyruvate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Dillenberger, M, Rahlfs, S, Becker, K, Fritz-Wolf, K.
Deposit date:2022-03-04
Release date:2022-08-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Prominent role of cysteine residues C49 and C343 in regulating Plasmodium falciparum pyruvate kinase activity.
Structure, 30, 2022
7SQJ
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BU of 7sqj by Molmil
Cryo-EM structure of the seam subunits of the enteropathogenic E. coli O127:H6 flagellar filament
Descriptor: Flagellin
Authors:Kreutzberger, M.A.B, Chatterjee, S, Frankel, G, Egelman, E.H.
Deposit date:2021-11-05
Release date:2022-03-16
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Flagellin outer domain dimerization modulates motility in pathogenic and soil bacteria from viscous environments.
Nat Commun, 13, 2022
7SQD
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BU of 7sqd by Molmil
Cryo-EM structure of the Achromobacter flagellar filament
Descriptor: Flagellin
Authors:Kreutzberger, M.A, Wang, F, Egelman, E.H.
Deposit date:2021-11-05
Release date:2022-03-16
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Flagellin outer domain dimerization modulates motility in pathogenic and soil bacteria from viscous environments.
Nat Commun, 13, 2022
7SN4
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BU of 7sn4 by Molmil
Cryo-EM structure of the enterohemorrhagic E. coli O157:H7 flagellar filament
Descriptor: Flagellin
Authors:Kreutzberger, M.A.B, Wang, F, Egelman, E.H.
Deposit date:2021-10-27
Release date:2022-03-16
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Flagellin outer domain dimerization modulates motility in pathogenic and soil bacteria from viscous environments.
Nat Commun, 13, 2022
7SN7
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BU of 7sn7 by Molmil
Cryo-EM structure of the enteropathogenic E. coli O127:H6 flagellar filament
Descriptor: Flagellin
Authors:Kreutzberger, M.A.B, Chatterjee, S, Frankel, G, Egelman, E.H.
Deposit date:2021-10-27
Release date:2022-03-16
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Flagellin outer domain dimerization modulates motility in pathogenic and soil bacteria from viscous environments.
Nat Commun, 13, 2022
7SN9
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BU of 7sn9 by Molmil
Cryo-EM structure of the Sinorhizobium meliloti flagellar filament
Descriptor: Flagellin A
Authors:Kreutzberger, M.A.B, Scharf, B.E, Egelman, E.H.
Deposit date:2021-10-27
Release date:2022-03-16
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Flagellin outer domain dimerization modulates motility in pathogenic and soil bacteria from viscous environments.
Nat Commun, 13, 2022
8CYE
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BU of 8cye by Molmil
Cryo-EM asymmetric reconstruction of the EPEC H6 bacterial flagellar filament Normal Waveform
Descriptor: Flagellin
Authors:Kreutzberger, M.A.B, Chatterjee, S, Frankel, G, Egelman, E.H.
Deposit date:2022-05-23
Release date:2022-09-07
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Convergent evolution in the supercoiling of prokaryotic flagellar filaments.
Cell, 185, 2022
8CWM
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BU of 8cwm by Molmil
Cryo-EM structure of the supercoiled S. islandicus REY15A archaeal flagellar filament
Descriptor: Flagellin
Authors:Kreutzberger, M.A.B, Liu, J, Krupovic, M, Egelman, E.H.
Deposit date:2022-05-19
Release date:2022-09-07
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Convergent evolution in the supercoiling of prokaryotic flagellar filaments.
Cell, 185, 2022
8CVI
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BU of 8cvi by Molmil
Cryo-EM structure of the supercoiled EPEC H6 flagellar filament core Curly I waveform
Descriptor: Flagellin
Authors:Kreutzberger, M.A, Chatterjee, S, Frankel, G, Egelman, E.H.
Deposit date:2022-05-18
Release date:2022-09-07
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Convergent evolution in the supercoiling of prokaryotic flagellar filaments.
Cell, 185, 2022
8SUG
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BU of 8sug by Molmil
Cryo-EM structure of the wild type P. aeruginosa flagellar filament
Descriptor: B-type flagellin
Authors:Kreutzberger, M.A, Nedeljkovic, M, Egelman, E.H, Sundberg, E.J.
Deposit date:2023-05-12
Release date:2023-06-14
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:An unbroken network of interactions connecting flagellin domains is required for motility in viscous environments.
Plos Pathog., 19, 2023
7Z4M
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BU of 7z4m by Molmil
Plasmodium falciparum pyruvate kinase complexed with Mg2+ and K+
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, MAGNESIUM ION, ...
Authors:Dillenberger, M, Rahlfs, S, Becker, K, Fritz-Wolf, K.
Deposit date:2022-03-04
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Prominent role of cysteine residues C49 and C343 in regulating Plasmodium falciparum pyruvate kinase activity.
Structure, 30, 2022
7Z4R
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BU of 7z4r by Molmil
Plasmodium falciparum pyruvate kinase mutant - C343A
Descriptor: MAGNESIUM ION, POTASSIUM ION, Pyruvate kinase
Authors:Dillenberger, M, Rahlfs, S, Becker, K, Fritz-Wolf, K.
Deposit date:2022-03-04
Release date:2022-08-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Prominent role of cysteine residues C49 and C343 in regulating Plasmodium falciparum pyruvate kinase activity.
Structure, 30, 2022
7Z4Q
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BU of 7z4q by Molmil
Plasmodium falciparum pyruvate kinase mutant - C49A
Descriptor: MAGNESIUM ION, Pyruvate kinase
Authors:Dillenberger, M, Rahlfs, S, Becker, K, Fritz-Wolf, K.
Deposit date:2022-03-04
Release date:2022-08-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Prominent role of cysteine residues C49 and C343 in regulating Plasmodium falciparum pyruvate kinase activity.
Structure, 30, 2022
7T0X
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BU of 7t0x by Molmil
Structure of the larger diameter PSMalpha3 nanotube
Descriptor: Phenol-soluble modulin PSM-alpha-3
Authors:Kreutzberger, M.A, Wang, S, Beltran, L.C, Egelman, E.H, Conticello, V.P.
Deposit date:2021-11-30
Release date:2022-05-18
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Phenol-soluble modulins PSM alpha 3 and PSM beta 2 form nanotubes that are cross-alpha amyloids.
Proc.Natl.Acad.Sci.USA, 119, 2022
7T8U
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BU of 7t8u by Molmil
Structure of PSMbeta2 nanotubes
Descriptor: Antibacterial protein
Authors:Kreutzberger, M.A, Wang, S, Egelman, E.H, Conicello, V.P.
Deposit date:2021-12-17
Release date:2022-05-18
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Phenol-soluble modulins PSM alpha 3 and PSM beta 2 form nanotubes that are cross-alpha amyloids.
Proc.Natl.Acad.Sci.USA, 119, 2022
2CH5
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BU of 2ch5 by Molmil
Crystal structure of human N-acetylglucosamine kinase in complex with N-acetylglucosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Weihofen, W.A, Berger, M, Chen, H, Saenger, W, Hinderlich, S.
Deposit date:2006-03-13
Release date:2006-09-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of Human N-Acetylglucosamine Kinase in Two Complexes with N-Acetylglucosamine and with Adp/Glucose: Insights Into Substrate Specificity and Regulation.
J.Mol.Biol., 364, 2006

 

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