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PDB: 34 results

3U0S
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BU of 3u0s by Molmil
Crystal Structure of an Enzyme Redesigned Through Multiplayer Online Gaming: CE6
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Diisopropyl-fluorophosphatase, GLYCEROL, ...
Authors:Bale, J.B, Shen, B.W, Stoddard, B.L.
Deposit date:2011-09-29
Release date:2012-02-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Increased Diels-Alderase activity through backbone remodeling guided by Foldit players.
Nat.Biotechnol., 30, 2012
1D19
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BU of 1d19 by Molmil
SOLUTION CONFORMATION OF PURINE-PYRIMIDINE DNA OCTAMERS USING NUCLEAR MAGNETIC RESONANCE, RESTRAINED MOLECULAR DYNAMICS AND NOE-BASED REFINEMENT
Descriptor: DNA (5'-D(*GP*TP*AP*CP*GP*TP*AP*C)-3')
Authors:Baleja, J.D, Sykes, B.D.
Deposit date:1990-08-01
Release date:1991-07-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution conformation of purine-pyrimidine DNA octamers using nuclear magnetic resonance, restrained molecular dynamics and NOE-based refinement.
J.Mol.Biol., 215, 1990
1D18
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BU of 1d18 by Molmil
SOLUTION CONFORMATION OF PURINE-PYRIMIDINE DNA OCTAMERS USING NUCLEAR MAGNETIC RESONANCE, RESTRAINED MOLECULAR DYNAMICS AND NOE-BASED REFINEMENT
Descriptor: DNA (5'-D(*CP*AP*TP*GP*CP*AP*TP*G)-3')
Authors:Baleja, J.D, Sykes, B.D.
Deposit date:1990-08-01
Release date:1991-07-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution conformation of purine-pyrimidine DNA octamers using nuclear magnetic resonance, restrained molecular dynamics and NOE-based refinement.
J.Mol.Biol., 215, 1990
1D20
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BU of 1d20 by Molmil
SOLUTION STRUCTURE OF PHAGE LAMBDA HALF-OPERATOR DNA
Descriptor: DNA (5'-D(*CP*GP*GP*TP*GP*AP*TP*AP*GP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*TP*CP*AP*CP*CP*G)-3')
Authors:Baleja, J.D, Sykes, B.D.
Deposit date:1990-08-01
Release date:1991-07-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of phage lambda half-operator DNA by use of NMR, restrained molecular dynamics, and NOE-based refinement.
Biochemistry, 29, 1990
1AW6
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BU of 1aw6 by Molmil
GAL4 (CD), NMR, 24 STRUCTURES
Descriptor: CADMIUM ION, GAL4 (CD)
Authors:Baleja, J.D, Wagner, G.
Deposit date:1997-10-10
Release date:1998-04-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Refined solution structure of the DNA-binding domain of GAL4 and use of 3J(113Cd,1H) in structure determination.
J.Biomol.NMR, 10, 1997
1CFG
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BU of 1cfg by Molmil
MEMBRANE-BINDING PEPTIDE FROM THE C2 DOMAIN OF FACTOR VIII FORMS AN AMPHIPATHIC STRUCTURE AS DETERMINED BY NMR SPECTROSCOPY
Descriptor: COAGULATION FACTOR VIII
Authors:Baleja, J.D, Gilbert, G.E.
Deposit date:1994-11-10
Release date:1995-11-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Membrane-binding peptide from the C2 domain of factor VIII forms an amphipathic structure as determined by NMR spectroscopy.
Biochemistry, 34, 1995
4ZK7
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BU of 4zk7 by Molmil
Crystal structure of rescued two-component self-assembling tetrahedral cage T33-31
Descriptor: Chorismate mutase, Divalent-cation tolerance protein CutA
Authors:Liu, Y, Cascio, D, Sawaya, M.R, Bale, J, Collazo, M.J, Park, R, King, N, Baker, D, Yeates, T.
Deposit date:2015-04-30
Release date:2015-07-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure of a designed tetrahedral protein assembly variant engineered to have improved soluble expression.
Protein Sci., 24, 2015
5IM4
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BU of 5im4 by Molmil
Crystal structure of designed two-component self-assembling icosahedral cage I52-32
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase, Phosphotransferase system, mannose/fructose-specific component IIA
Authors:Liu, Y.A, Cascio, D, Sawaya, M.R, Bale, J.B, Collazo, M.J, Thomas, C, Sheffler, W, King, N.P, Baker, D, Yeates, T.O.
Deposit date:2016-03-05
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Accurate design of megadalton-scale two-component icosahedral protein complexes.
Science, 353, 2016
5IM6
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BU of 5im6 by Molmil
Crystal structure of designed two-component self-assembling icosahedral cage I32-28
Descriptor: Designed self-assembling icosahedral cage I32-28 dimeric subunit, Designed self-assembling icosahedral cage I32-28 trimeric subunit
Authors:Liu, Y.A, Cascio, D, Sawaya, M.R, Bale, J.B, Collazo, M.J, Thomas, C, Sheffler, W, King, N.P, Baker, D, Yeates, T.O.
Deposit date:2016-03-05
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (5.588 Å)
Cite:Accurate design of megadalton-scale two-component icosahedral protein complexes.
Science, 353, 2016
5IM5
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BU of 5im5 by Molmil
Crystal structure of designed two-component self-assembling icosahedral cage I53-40
Descriptor: Designed Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase, Designed Riboflavin synthase
Authors:Liu, Y.A, Cascio, D, Sawaya, M.R, Bale, J.B, Collazo, M.J, Thomas, C, Sheffler, W, King, N.P, Baker, D, Yeates, T.O.
Deposit date:2016-03-05
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.699 Å)
Cite:Accurate design of megadalton-scale two-component icosahedral protein complexes.
Science, 353, 2016
4NWR
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BU of 4nwr by Molmil
Computationally Designed Two-Component Self-Assembling Tetrahedral Cage T33-28
Descriptor: Macrophage migration inhibitory factor-like protein, integron gene cassette protein
Authors:McNamara, D.E, King, N.P, Bale, J.B, Sheffler, W, Baker, D, Yeates, T.O.
Deposit date:2013-12-06
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Accurate design of co-assembling multi-component protein nanomaterials.
Nature, 510, 2014
4NWN
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BU of 4nwn by Molmil
Computationally Designed Two-Component Self-Assembling Tetrahedral Cage T32-28
Descriptor: Propanediol utilization: polyhedral bodies pduT, Uncharacterized protein
Authors:McNamara, D.E, King, N.P, Bale, J.B, Sheffler, W, Baker, D, Yeates, T.O.
Deposit date:2013-12-06
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Accurate design of co-assembling multi-component protein nanomaterials.
Nature, 510, 2014
4NWP
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BU of 4nwp by Molmil
Computationally Designed Two-Component Self-Assembling Tetrahedral Cage, T33-21, Crystallized in Space Group R32
Descriptor: AMMONIUM ION, Putative uncharacterized protein, SULFATE ION, ...
Authors:McNamara, D.E, King, N.P, Bale, J.B, Sheffler, W, Baker, D, Yeates, T.O.
Deposit date:2013-12-06
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Accurate design of co-assembling multi-component protein nanomaterials.
Nature, 510, 2014
4NWQ
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BU of 4nwq by Molmil
Computationally Designed Two-Component Self-Assembling Tetrahedral Cage, T33-21, Crystallized in Space Group F4132
Descriptor: Putative uncharacterized protein PH0671, SULFATE ION, Uncharacterized protein
Authors:McNamara, D.E, King, N.P, Bale, J.B, Sheffler, W, Baker, D, Yeates, T.O.
Deposit date:2013-12-06
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Accurate design of co-assembling multi-component protein nanomaterials.
Nature, 510, 2014
4NWO
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BU of 4nwo by Molmil
Computationally Designed Two-Component Self-Assembling Tetrahedral Cage T33-15
Descriptor: CALCIUM ION, Chorismate mutase AroH, Molybdenum cofactor biosynthesis protein MogA
Authors:McNamara, D.E, King, N.P, Bale, J.B, Sheffler, W, Baker, D, Yeates, T.O.
Deposit date:2013-12-06
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Accurate design of co-assembling multi-component protein nanomaterials.
Nature, 510, 2014
1WCT
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BU of 1wct by Molmil
A NOVEL CONOTOXIN FROM CONUS TEXTILE WITH UNUSUAL POST-TRANSLATIONAL MODIFICATIONS REDUCES PRESYNAPTIC CALCIUM INFLUX, NMR, 1 STRUCTURE, GLYCOSYLATED PROTEIN
Descriptor: OMEGAC-TXIX, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose
Authors:Rigby, A.C, Hambe, B, Czerwiec, E, Baleja, J.D, Furie, B.C, Furie, B, Stenflo, J.
Deposit date:1998-12-18
Release date:1999-06-08
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:A conotoxin from Conus textile with unusual posttranslational modifications reduces presynaptic Ca2+ influx.
Proc.Natl.Acad.Sci.USA, 96, 1999
1MGX
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BU of 1mgx by Molmil
COAGULATION FACTOR, MG(II), NMR, 7 STRUCTURES (BACKBONE ATOMS ONLY)
Descriptor: COAGULATION FACTOR IX
Authors:Freedman, S.J, Furie, B.C, Furie, B, Baleja, J.D.
Deposit date:1995-06-21
Release date:1996-11-08
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Identification of the phospholipid binding site in the vitamin K-dependent blood coagulation protein factor IX.
J.Biol.Chem., 271, 1996
3MI7
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BU of 3mi7 by Molmil
An Enhanced Repressor of Human Papillomavirus E2 Protein
Descriptor: 1,2-ETHANEDIOL, Regulatory protein E2
Authors:Bohm, A, Baleja, J, Bose, K, Meinke, G.
Deposit date:2010-04-09
Release date:2011-04-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Design and characterization of an enhanced repressor of human papillomavirus E2 protein.
Faseb J., 25, 2011
1FAC
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BU of 1fac by Molmil
COAGULATION FACTOR VIII, NMR, 1 STRUCTURE
Descriptor: COAGULATION FACTOR VIII
Authors:Veeraraghavan, S, Baleja, J.D, Gilbert, G.E.
Deposit date:1996-06-30
Release date:1997-01-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and topography of the membrane-binding C2 domain of factor VIII in the presence of dodecylphosphocholine micelles.
Biochem.J., 332, 1998
1FSB
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BU of 1fsb by Molmil
STRUCTURE OF THE EGF DOMAIN OF P-SELECTIN, NMR, 19 STRUCTURES
Descriptor: P-SELECTIN
Authors:Freedman, S.J, Sanford, D.G, Bachovchin, W.W, Furie, B.C, Baleja, J.D, Furie, B.
Deposit date:1996-03-25
Release date:1997-04-01
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure and function of the epidermal growth factor domain of P-selectin.
Biochemistry, 35, 1996
1EQX
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BU of 1eqx by Molmil
SOLUTION STRUCTURE DETERMINATION AND MUTATIONAL ANALYSIS OF THE PAPILLOMAVIRUS E6-INTERACTING PEPTIDE OF E6AP
Descriptor: PAPILLOMAVIRUS E6-ASSOCIATED PROTEIN
Authors:Be, X, Hong, Y, Androphy, E.J, Chen, J.J, Baleja, J.D.
Deposit date:2000-04-06
Release date:2001-02-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure determination and mutational analysis of the papillomavirus E6 interacting peptide of E6AP.
Biochemistry, 40, 2001
1CFH
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BU of 1cfh by Molmil
STRUCTURE OF THE METAL-FREE GAMMA-CARBOXYGLUTAMIC ACID-RICH MEMBRANE BINDING REGION OF FACTOR IX BY TWO-DIMENSIONAL NMR SPECTROSCOPY
Descriptor: COAGULATION FACTOR IX, FORMIC ACID
Authors:Freedman, S.J, Furie, B.C, Furie, B, Baleja, J.D.
Deposit date:1995-02-26
Release date:1995-07-10
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Structure of the metal-free gamma-carboxyglutamic acid-rich membrane binding region of factor IX by two-dimensional NMR spectroscopy.
J.Biol.Chem., 270, 1995
3BJ9
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BU of 3bj9 by Molmil
Crystal structure of the Surrogate Light Chain Variable Domain VpreBJ
Descriptor: 1,2-ETHANEDIOL, Immunoglobulin iota chain, Immunoglobulin lambda-like polypeptide 1
Authors:Morstadt, L.M, Bohm, A.A, Stollar, B.D, Baleja, J.D.
Deposit date:2007-12-03
Release date:2008-03-04
Last modified:2019-09-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Engineering and characterization of a single chain surrogate light chain variable domain.
Protein Sci., 17, 2008
2K6S
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BU of 2k6s by Molmil
Structure of Rab11-FIP2 C-terminal Coiled-coil Domain
Descriptor: Rab11fip2 protein
Authors:Wei, J, Liu, Y, Baleja, J.D.
Deposit date:2008-07-18
Release date:2009-06-16
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Disorder and structure in the Rab11 binding domain of Rab11 family interacting protein 2.
Biochemistry, 48, 2009
2OQS
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BU of 2oqs by Molmil
Structure of the hDLG/SAP97 PDZ2 in complex with HPV-18 papillomavirus E6 peptide
Descriptor: C-terminal HPV-18 E6 peptide, Disks large homolog 1
Authors:Liu, Y, Baleja, J.D, Henry, G.D, Hegde, R.S.
Deposit date:2007-02-01
Release date:2007-09-04
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the hDlg/SAP97 PDZ2 domain and its mechanism of interaction with HPV-18 papillomavirus E6 protein.
Biochemistry, 46, 2007

 

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