Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 14971 件

5J8O
DownloadVisualize
BU of 5j8o by Molmil
Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor
分子名称: (2R)-1-({3-bromo-4-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]phenyl}methyl)piperidine-2-carboxylic acid, Programmed cell death 1 ligand 1
著者Zak, K.M, Grudnik, P, Guzik, K, Zieba, B.J, Musielak, B, Doemling, P, Dubin, G, Holak, T.A.
登録日2016-04-08
公開日2016-04-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for small molecule targeting of the programmed death ligand 1 (PD-L1).
Oncotarget, 7, 2016
5JAV
DownloadVisualize
BU of 5jav by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS Y91D at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Skerritt, L.A, Robinson, A.C, Schlessman, J.L, Garcia-Moreno E, B.
登録日2016-04-12
公開日2016-04-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Crystal structure of Staphylococcal nuclease variant Delta+PHS Y91D at cryogenic temperature
To be Published
1MI0
DownloadVisualize
BU of 1mi0 by Molmil
Crystal Structure of the redesigned protein G variant NuG2
分子名称: immunoglobulin-binding protein G
著者Nauli, S, Kuhlman, B, Le Trong, I, Stenkamp, R.E, Teller, D.C, Baker, D.
登録日2002-08-21
公開日2002-09-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structures and increased stabilization of the protein G variants with switched folding pathways NuG1 and NuG2
Biochemistry, 11, 2002
1MO9
DownloadVisualize
BU of 1mo9 by Molmil
NADPH DEPENDENT 2-KETOPROPYL COENZYME M OXIDOREDUCTASE/CARBOXYLASE COMPLEXED WITH 2-KETOPROPYL COENZYME M
分子名称: (2-[2-KETOPROPYLTHIO]ETHANESULFONATE, FLAVIN-ADENINE DINUCLEOTIDE, orf3
著者Nocek, B, Jang, S.B, Jeong, M.S, Clark, D.D, Ensign, S.A, Peters, J.W.
登録日2002-09-08
公開日2002-11-27
最終更新日2012-05-09
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural Basis for CO2 Fixation by a Novel Member of the Disulfide Oxidoreductase Family of Enzymes, 2-Ketopropyl Coenzyme M Oxidoreductase/Carboxylase
Biochemistry, 41, 2002
5JG3
DownloadVisualize
BU of 5jg3 by Molmil
Human carbonic anhydrase II (121T/N67Q) complexed with benzo[d]thiazole-2-sulfonamide
分子名称: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
著者Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
登録日2016-04-19
公開日2017-01-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
1MOG
DownloadVisualize
BU of 1mog by Molmil
Crystal structure of H. salinarum dodecin
分子名称: CHLORIDE ION, Dodecin, MAGNESIUM ION, ...
著者Bieger, B, Essen, L.-O, Oesterhelt, D.
登録日2002-09-09
公開日2003-04-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of Halophilic Dodecin: A Novel, Dodecameric Flavin Binding Protein from Halobacterium salinarum
Structure, 11, 2003
5JGS
DownloadVisualize
BU of 5jgs by Molmil
Human carbonic anhydrase II (F131Y/L198A) complexed with benzo[d]thiazole-2-sulfonamide
分子名称: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
著者Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
登録日2016-04-20
公開日2017-01-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.11 Å)
主引用文献Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
1MPZ
DownloadVisualize
BU of 1mpz by Molmil
NMR solution structure of native Viperidae lebetina obtusa protein
分子名称: Obtustatin
著者Moreno-Murciano, M.P, Monleon, D, Marcinkiewicz, C, Calvete, J.J, Celda, B.
登録日2002-09-13
公開日2003-02-11
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献NMR Solution Structure of the Non-RGD Disintegrin Obtustatin
J.Mol.Biol., 329, 2003
5JIP
DownloadVisualize
BU of 5jip by Molmil
Crystal structure of the Clostridium perfringens spore cortex lytic enzyme SleM
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cortical-lytic enzyme, MAGNESIUM ION
著者Chirgadze, D.Y, Christie, G, Ustok, F.I, Al-Riyami, B, Stott, K.
登録日2016-04-22
公開日2016-08-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The crystal structure of Clostridium perfringens SleM, a muramidase involved in cortical hydrolysis during spore germination.
Proteins, 84, 2016
5JA7
DownloadVisualize
BU of 5ja7 by Molmil
Human cathepsin K mutant C25S in complex with the allosteric effector NSC94914
分子名称: ACETATE ION, Cathepsin K, GLYCEROL, ...
著者Novinec, M, Korenc, M, Lenarcic, B.
登録日2016-04-12
公開日2016-11-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献An allosteric site enables fine-tuning of cathepsin K by diverse effectors.
FEBS Lett., 590, 2016
5JAX
DownloadVisualize
BU of 5jax by Molmil
PKG I's Carboyl Terminal Cyclic Nucleotide Binding Domain (CNB-B) in a complex with 8-Br-cGMP
分子名称: 2-amino-8-bromo-9-[(2R,4aR,6R,7R,7aS)-2,7-dihydroxy-2-oxotetrahydro-2H,4H-2lambda~5~-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]-1,9-dihydro-6H-purin-6-one, CALCIUM ION, SODIUM ION, ...
著者Campbell, J.C, Sankaran, B, Kim, C.W.
登録日2016-04-12
公開日2017-04-19
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.486 Å)
主引用文献Structural Basis of Analog Specificity in PKG I and II.
ACS Chem. Biol., 12, 2017
5J5D
DownloadVisualize
BU of 5j5d by Molmil
Crystal structure of Dihydrodipicolinate Synthase from Mycobacterium tuberculosis in complex with alpha-ketopimelic acid
分子名称: 2-oxoheptanedioic acid, 4-hydroxy-tetrahydrodipicolinate synthase, SODIUM ION
著者Navratna, V, Gopal, B.
登録日2016-04-02
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Inhibition of Mycobacterium tuberculosis dihydrodipicolinate synthase by alpha-ketopimelic acid and its other structural analogues
Sci Rep, 6, 2016
5J62
DownloadVisualize
BU of 5j62 by Molmil
FMN-dependent Nitroreductase (CDR20291_0684) from Clostridium difficile R20291
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, PHOSPHATE ION, ...
著者Wang, B, Powell, S.M, Hessami, N, Najar, F.Z, Thomas, L.M, West, A.H, Karr, E.A, Richter-Addo, G.B.
登録日2016-04-04
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures of two nitroreductases from hypervirulent Clostridium difficile and functionally related interactions with the antibiotic metronidazole.
Nitric Oxide, 60, 2016
1MQX
DownloadVisualize
BU of 1mqx by Molmil
NMR Solution Structure of Type-B Lantibiotics Mersacidin in MeOH/H2O Mixture
分子名称: LANTIBIOTIC MERSACIDIN
著者Hsu, S.-T, Breukink, E, Bierbaum, G, Sahl, H.-G, de Kruijff, B, Kaptein, R, van Nuland, N.A, Bonvin, A.M.
登録日2002-09-17
公開日2003-03-11
最終更新日2018-08-08
実験手法SOLUTION NMR
主引用文献NMR Study of Mersacidin and Lipid II Interaction in Dodecylphosphocholine Micelles. Conformational Changes are a Key to Antimicrobial Activity
J.Biol.Chem., 278, 2003
1MR0
DownloadVisualize
BU of 1mr0 by Molmil
SOLUTION NMR STRUCTURE OF AGRP(87-120; C105A)
分子名称: AGOUTI RELATED PROTEIN
著者Jackson, P.J, Mcnulty, J.C, Yang, Y.K, Thompson, D.A, Chai, B, Gantz, I, Barsh, G.S, Millhauser, G.M.
登録日2002-09-17
公開日2002-10-02
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Design, pharmacology, and NMR structure of a minimized cystine knot with agouti-related protein activity.
Biochemistry, 41, 2002
1MZH
DownloadVisualize
BU of 1mzh by Molmil
QR15, an Aldolase
分子名称: Deoxyribose-phosphate aldolase, PHOSPHATE ION
著者Tan, A.Y, Smith, P.C, Shen, J, Xiao, R, Acton, T, Rost, B, Montelione, G, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2002-10-07
公開日2003-02-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Aquifex Aeolicus Aldolase, Northeast Structural Genomics Consortium Target QR15
To be Published
5J6C
DownloadVisualize
BU of 5j6c by Molmil
FMN-dependent Nitroreductase (CDR20291_0767) from Clostridium difficile R20291
分子名称: FLAVIN MONONUCLEOTIDE, IMIDAZOLE, Putative reductase
著者Powell, S.M, Wang, B, Hessami, N, Najar, F.Z, Thomas, L.M, West, A.H, Karr, E.A, Richter-Addo, G.B.
登録日2016-04-04
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.096 Å)
主引用文献Crystal structures of two nitroreductases from hypervirulent Clostridium difficile and functionally related interactions with the antibiotic metronidazole.
Nitric Oxide, 60, 2016
5J89
DownloadVisualize
BU of 5j89 by Molmil
Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor
分子名称: 1,2-ETHANEDIOL, N-{2-[({2-methoxy-6-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]pyridin-3-yl}methyl)amino]ethyl}acetamide, Programmed cell death 1 ligand 1
著者Zak, K.M, Grudnik, P, Guzik, K, Zieba, B.J, Musielak, B, Doemling, P, Dubin, G, Holak, T.A.
登録日2016-04-07
公開日2016-04-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for small molecule targeting of the programmed death ligand 1 (PD-L1).
Oncotarget, 7, 2016
5JCR
DownloadVisualize
BU of 5jcr by Molmil
Crystal structure of the FimH lectin domain from E.coli K12 in complex with methyl alpha-D-mannopyrannoside in spacegroup P212121
分子名称: Protein FimH, methyl alpha-D-mannopyranoside
著者Jakob, R.P, Rabbani, S, Ernst, B, Maier, T.
登録日2016-04-15
公開日2017-05-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Crystal structure of the FimH lectin domain from E.coli K12 in complex with methyl alpha-D-mannopyrannoside in spacegroup P212121
To Be Published
1MU8
DownloadVisualize
BU of 1mu8 by Molmil
thrombin-hirugen_l-378,650
分子名称: 2-(6-CHLORO-3-{[2,2-DIFLUORO-2-(2-PYRIDINYL)ETHYL]AMINO}-2-OXO-1(2H)-PYRAZINYL)-N-[(2-FLUORO-3-METHYL-6-PYRIDINYL)METHYL]ACETAMIDE, HIRUDIN IIB, THROMBIN
著者Burgey, C.S, Robinson, K.A, Lyle, T.A, Sanderson, P.E, Lewis, S.D, Lucas, B.J, Krueger, J.A, Singh, R, Miller-Stein, C, White, R.B, Wong, B, Lyle, E.A, Williams, P.D, Coburn, C.A, Dorsey, B.D, Barrow, J.C, Stranieri, M.T, Holahan, M.A, Sitko, G.R, Cook, J.J, McMasters, D.R, McDonough, C.M, Sanders, W.M, Wallace, A.A, Clayton, F.C, Bohn, D, Leonard, Y.M, Detwiler Jr, T.J, Lynch Jr, J.J, Yan, Y, Chen, Z, Kuo, L, Gardell, S.J, Shafer, J.A, Vacca, J.P.J.
登録日2002-09-23
公開日2004-04-06
最終更新日2021-07-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Metabolism-directed optimization of 3-aminopyrazinone acetamide thrombin inhibitors. Development of an orally bioavailable series containing P1 and P3 pyridines.
J.Med.Chem., 46, 2003
5JDV
DownloadVisualize
BU of 5jdv by Molmil
Human carbonic anhydrase II (F131W) complexed with benzo[d]thiazole-2-sulfonamide
分子名称: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
著者Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
登録日2016-04-17
公開日2017-01-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
1N10
DownloadVisualize
BU of 1n10 by Molmil
Crystal Structure of Phl p 1, a Major Timothy Grass Pollen Allergen
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pollen allergen Phl p 1
著者Fedorov, A.A, Ball, T, Leistler, B, Valenta, R, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2002-10-16
公開日2003-01-28
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献X-ray Crystal Structure of Phl p 1, a Major Timothy Grass Pollen Allergen
To be Published
1N1Q
DownloadVisualize
BU of 1n1q by Molmil
Crystal structure of a Dps protein from Bacillus brevis
分子名称: DPS Protein, MU-OXO-DIIRON
著者Ren, B, Tibbelin, G, Kajino, T, Asami, O, Ladenstein, R.
登録日2002-10-19
公開日2003-05-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Multi-layered Structure of Dps with a Novel Di-nuclear Ferroxidase Center
J.Mol.Biol., 329, 2003
1MYR
DownloadVisualize
BU of 1myr by Molmil
MYROSINASE FROM SINAPIS ALBA
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Burmeister, W.P, Iori, R, Palmieri, S, Henrissat, B.
登録日1997-03-23
公開日1997-06-16
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献The crystal structures of Sinapis alba myrosinase and a covalent glycosyl-enzyme intermediate provide insights into the substrate recognition and active-site machinery of an S-glycosidase.
Structure, 5, 1997
5JHX
DownloadVisualize
BU of 5jhx by Molmil
Crystal Structure of Fungal MagKatG2 at pH 3.0
分子名称: CITRATE ANION, Catalase-peroxidase 2, PROTOPORPHYRIN IX CONTAINING FE
著者Gasselhuber, B, Obinger, C, Carpena, X.
登録日2016-04-21
公開日2016-06-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Interaction with the Redox Cofactor MYW and Functional Role of a Mobile Arginine in Eukaryotic Catalase-Peroxidase.
Biochemistry, 55, 2016

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon