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PDB: 43 results

6CYA
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BU of 6cya by Molmil
Rotavirus SA11 NSP2 S313A mutant
Descriptor: CHLORIDE ION, GLYCEROL, Non-structural protein 2
Authors:Anish, R, Hu, L, Prasad, B.V.V.
Deposit date:2018-04-05
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CY9
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SA11 Rotavirus NSP2 with disulfide bridge
Descriptor: MAGNESIUM ION, Non-structural protein 2
Authors:Anish, R, Hu, L, Sankaran, B, Prasad, B.V.V.
Deposit date:2018-04-05
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.615 Å)
Cite:Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1NI9
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2.0 A structure of glycerol metabolism protein from E. coli
Descriptor: Protein glpX, SULFATE ION
Authors:Sanishvili, R, Brunzelle, J, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-12-23
Release date:2003-07-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Biochemical Characterization of the Type II Fructose-1,6-bisphosphatase GlpX from Escherichia coli.
J.Biol.Chem., 284, 2009
1NIG
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2.0 A Structure of Protein of Unknown Function from Thermoplasma acidophilum
Descriptor: hypothetical protein TA1238
Authors:Sanishvili, R, Edwards, A, Christendat, D, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-12-23
Release date:2003-07-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the hypothetical protein TA1238 from Thermoplasma acidophilum: a new type of helical super-bundle.
J.STRUCT.FUNCT.GENOM., 5, 2004
1MKZ
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Crystal structure of MoaB protein at 1.6 A resolution.
Descriptor: ACETIC ACID, Molybdenum cofactor biosynthesis protein B, SULFATE ION
Authors:Sanishvili, R, Skarina, T, Joachimiak, A, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-08-29
Release date:2003-04-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of Escherichia coli MoaB suggests a probable role in molybdenum cofactor synthesis.
J.Biol.Chem., 279, 2004
1M3S
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BU of 1m3s by Molmil
Crystal structure of YckF from Bacillus subtilis
Descriptor: Hypothetical protein yckf
Authors:Sanishvili, R, Wu, R, Kim, D.E, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-06-28
Release date:2003-01-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Bacillus subtilis YckF: structural and functional evolution.
J.Struct.Biol., 148, 2004
1M33
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Crystal Structure of BioH at 1.7 A
Descriptor: 1,2-ETHANEDIOL, 3-HYDROXY-PROPANOIC ACID, BioH protein
Authors:Sanishvili, R, Savchenko, A, Skarina, T, Edwards, A, Joachimiak, A, Yakunin, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-06-26
Release date:2003-01-21
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Integrating structure, bioinformatics, and enzymology to discover function: BioH, a new carboxylesterase from Escherichia coli.
J.Biol.Chem., 278, 2003
1CRC
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BU of 1crc by Molmil
CYTOCHROME C AT LOW IONIC STRENGTH
Descriptor: CYTOCHROME C, HEME C
Authors:Sanishvili, R, Volz, K.W, Westbrook, E.M, Margoliash, E.
Deposit date:1995-03-22
Release date:1996-03-08
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The low ionic strength crystal structure of horse cytochrome c at 2.1 A resolution and comparison with its high ionic strength counterpart.
Structure, 3, 1995
1K7K
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crystal structure of RdgB- inosine triphosphate pyrophosphatase from E. coli
Descriptor: Hypothetical protein yggV
Authors:Sanishvili, R, Joachimiak, A, Edwards, A, Savchenko, A, Skarina, T, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-10-19
Release date:2002-08-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular basis of the antimutagenic activity of the house-cleaning inosine triphosphate pyrophosphatase RdgB from Escherichia coli.
J.Mol.Biol., 374, 2007
5EDV
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BU of 5edv by Molmil
Structure of the HOIP-RBR/UbcH5B~ubiquitin transfer complex
Descriptor: E3 ubiquitin-protein ligase RNF31, Polyubiquitin-B, Ubiquitin-conjugating enzyme E2 D2, ...
Authors:Lechtenberg, B.C, Mace, P.D, Sanishvili, R, Riedl, S.J.
Deposit date:2015-10-22
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Structure of a HOIP/E2~ubiquitin complex reveals RBR E3 ligase mechanism and regulation.
Nature, 529, 2016
4Y0I
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BU of 4y0i by Molmil
GABA-aminotransferase inactivated by conformationally-restricted inactivator
Descriptor: 4-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]THIOPHENE-2-CARBOXYLIC ACID, 4-aminobutyrate aminotransferase, mitochondrial, ...
Authors:Wu, R, Sanishvili, R, Lee, H.V, Dustin, D.H, Emma, D, Neil, K, Silverman, R.B, Liu, D.
Deposit date:2015-02-06
Release date:2016-02-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.662 Å)
Cite:GABA-aminotransferase inactivated by conformationally-restricted inactivator
To Be Published
1PUY
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BU of 1puy by Molmil
1.5 A resolution structure of a synthetic DNA hairpin with a stilbenediether linker
Descriptor: 5'-D(*GP*TP*TP*TP*TP*GP*(S02)P*CP*AP*AP*AP*AP*C)-3', MAGNESIUM ION
Authors:Egli, M, Tereshko, V, Murshudov, G, Sanishvili, R, Liu, X, Lewis, F.D.
Deposit date:2003-06-25
Release date:2003-10-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Face-to-face and edge-to-face pi-pi interactions in a synthetic DNA hairpin with a stilbenediether linker
J.Am.Chem.Soc., 125, 2003
2OBZ
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BU of 2obz by Molmil
Crystal structure of the The brominated Z-DNA duplex d(CGCG[BrU]G)
Descriptor: 5'-D(*CP*GP*CP*GP*(BRU)P*G)-3'
Authors:Schiltz, M, Sanishvili, R.
Deposit date:2006-12-20
Release date:2007-12-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Polarisation-dependence of anomalous scattering in brominated DNA and RNA molecules, and importance of crystal orientation in SAD and MAD phasing
To be Published
1CS7
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BU of 1cs7 by Molmil
SYNTHETIC DNA HAIRPIN WITH STILBENEDIETHER LINKER
Descriptor: 5'-D(GP*(BRU)P*TP*TP*TP*GP*(S02)*CP*AP*AP*AP*AP*C)-3', STRONTIUM ION
Authors:Lewis, F.D, Liu, X, Wu, Y, Miller, S.E, Wasielewski, M.R, Letsinger, R.L, Sanishvili, R, Joachimiak, A, Tereshko, V, Egli, M.
Deposit date:1999-08-17
Release date:2001-10-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and Photoinduced Electron Transfer in Exceptionally Stable Synthetic DNA Hairpins with Stilbenediether Linkers
J.Am.Chem.Soc., 121, 1999
2O53
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BU of 2o53 by Molmil
Crystal structure of apo-Aspartoacylase from human brain
Descriptor: Aspartoacylase, PHOSPHATE ION, ZINC ION
Authors:Le Coq, J, Pavlovsky, A, Sanishvili, R, Viola, R.E.
Deposit date:2006-12-05
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Examination of the Mechanism of Human Brain Aspartoacylase through the Binding of an Intermediate Analogue.
Biochemistry, 47, 2008
6AUN
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BU of 6aun by Molmil
calcium-independent phospholipase A2 beta
Descriptor: PLA2G6, iPLA2beta
Authors:Malley, K, Koroleva, O, Miller, I, Sanishvili, R, Jenkins, C.M, Gross, R.W, Korolev, S.
Deposit date:2017-09-01
Release date:2018-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.951 Å)
Cite:The structure of iPLA2beta reveals dimeric active sites and suggests mechanisms of regulation and localization.
Nat Commun, 9, 2018
2O4H
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BU of 2o4h by Molmil
Human brain aspartoacylase complex with intermediate analog (N-phosphonomethyl-L-aspartate)
Descriptor: Aspartoacylase, N-[HYDROXY(METHYL)PHOSPHORYL]-L-ASPARTIC ACID, ZINC ION
Authors:Le Coq, J, Pavlovsky, A, Sanishvili, R, Viola, R.E.
Deposit date:2006-12-04
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Examination of the Mechanism of Human Brain Aspartoacylase through the Binding of an Intermediate Analogue.
Biochemistry, 47, 2008
2R4R
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BU of 2r4r by Molmil
Crystal structure of the human beta2 adrenoceptor
Descriptor: Beta-2 adrenergic receptor, antibody for beta2 adrenoceptor, heavy chain, ...
Authors:Rasmussen, S.G.F, Choi, H.J, Rosenbaum, D.M, Kobilka, T.S, Thian, F.S, Edwards, P.C, Burghammer, M, Ratnala, V.R, Sanishvili, R, Fischetti, R.F, Schertler, G.F, Weis, W.I, Kobilka, B.K.
Deposit date:2007-08-31
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of the human beta2 adrenergic G-protein-coupled receptor.
Nature, 450, 2007
4LMG
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BU of 4lmg by Molmil
Crystal structure of AFT2 in complex with DNA
Descriptor: 5'-D(*AP*AP*GP*TP*GP*CP*AP*CP*CP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*TP*GP*GP*GP*TP*GP*CP*AP*CP*T)-3', Iron-regulated transcriptional activator AFT2, ...
Authors:Poor, C.B, Sanishvili, R, Schuermann, J.P, He, C.
Deposit date:2013-07-10
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular mechanism and structure of the Saccharomyces cerevisiae iron regulator Aft2.
Proc.Natl.Acad.Sci.USA, 111, 2014
1GOY
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BU of 1goy by Molmil
HYDROLASE(ENDORIBONUCLEASE)RIBONUCLEASE BI(G SPECIFIC ENDONUCLEASE) (E.C.3.1.27.-) COMPLEXED WITH GUANOSINE-3'-PHOSPHATE (3'-GMP)
Descriptor: GUANOSINE-3'-MONOPHOSPHATE, RIBONUCLEASE, SULFATE ION
Authors:Polyakov, K.M, Lebedev, A.A, Pavlovsky, A.G, Sanishvili, R.G, Dodson, G.G.
Deposit date:2001-10-26
Release date:2001-11-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structure of Substrate-Free Microbial Ribonuclease Binase and of its Complexes with 3'Gmp and Sulfate Ions
Acta Crystallogr.,Sect.D, 58, 2002
1YB2
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BU of 1yb2 by Molmil
Structure of a putative methyltransferase from Thermoplasma acidophilum.
Descriptor: hypothetical protein Ta0852
Authors:Cuff, M.E, Xu, X, Edwards, A, Savchenko, A, Sanishvili, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-12-18
Release date:2005-02-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure of a putative methyltransferase from Thermoplasma acidophilum.
To be Published
1GOV
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BU of 1gov by Molmil
RIBONUCLEASE BI(G SPECIFIC ENDONUCLEASE) COMPLEXED WITH SULFATE IONS
Descriptor: RIBONUCLEASE, SULFATE ION
Authors:Polyakov, K.M, Lebedev, A.A, Pavlovsky, A.G, Sanishvili, R.G, Dodson, G.G.
Deposit date:2001-10-26
Release date:2001-11-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structure of Substrate-Free Microbial Ribonuclease Binase and of its Complexes with 3'Gmp and Sulfate Ions
Acta Crystallogr.,Sect.D, 58, 2002
2R4S
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BU of 2r4s by Molmil
Crystal structure of the human beta2 adrenoceptor
Descriptor: Beta-2 adrenergic receptor, antibody for beta2 adrenoceptor, heavy chain, ...
Authors:Rasmussen, S.G.F, Choi, H.J, Rosenbaum, D.M, Kobilka, T.S, Thian, F.S, Edwards, P.C, Burghammer, M, Ratnala, V.R, Sanishvili, R, Fischetti, R.F, Schertler, G.F, Weis, W.I, Kobilka, B.K.
Deposit date:2007-08-31
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of the human beta2 adrenergic G-protein-coupled receptor.
Nature, 450, 2007
2FPO
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BU of 2fpo by Molmil
Putative methyltransferase yhhF from Escherichia coli.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, methylase yhhF
Authors:Osipiuk, J, Kim, Y, Sanishvili, R, Skarina, T, Evdokimova, E, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-01-16
Release date:2006-02-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Methyltransferase that modifies guanine 966 of the 16 S rRNA: functional identification and tertiary structure.
J.Biol.Chem., 282, 2007
5T4L
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PLP and GABA Trigger GabR-Mediated Transcription Regulation in Bacillus subsidies via External Aldimine Formation
Descriptor: (4R)-4-amino-6-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}hexanoic acid, Aspartate aminotransferase
Authors:Wu, R, Sanishvili, R, Belitsky, B.R, Juncosa, J.I, Le, H.V, Lehrer, H.J.S, Farley, M, Silverman, R.B, Petsko, G.A, Ringe, D, Liu, D.
Deposit date:2016-08-29
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

 

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