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PDB: 4046 件

8P8K
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Acyl-ACP thioesterase from Lemna paucicostata in complex with a thiazolopyridine
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[2,6-bis(fluoranyl)phenyl]-6-chloranyl-[1,3]thiazolo[4,5-b]pyridine, Acyl-ACP thioesterase
著者Freigang, J.
登録日2023-06-01
公開日2023-09-20
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A Study in Scaffold Hopping: Discovery and Optimization of Thiazolopyridines as Potent Herbicides That Inhibit Acyl-ACP Thioesterase.
J.Agric.Food Chem., 71, 2023
7WWF
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Crystal structure of BioH3 from Mycolicibacterium smegmatis
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, Esterase
著者Yang, J, Xu, Y.C, Gan, J.H, Feng, Y.J.
登録日2022-02-12
公開日2022-07-06
最終更新日2023-01-18
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Three enigmatic BioH isoenzymes are programmed in the early stage of mycobacterial biotin synthesis, an attractive anti-TB drug target.
Plos Pathog., 18, 2022
5Z6Y
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Structure of sfYFP48S95C66BPA
分子名称: Green fluorescent protein
著者Wang, J.Y, Wang, J.Y.
登録日2018-01-25
公開日2019-06-12
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献structure of sfYFP48S95C66BPA at 1.95 Angstroms resolution
To Be Published
7X45
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Grass carp interferon gamma related
分子名称: Interferon gamma
著者Wang, J, Zou, J, Zhu, X.
登録日2022-03-02
公開日2022-09-14
最終更新日2023-04-19
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Novel Dimeric Architecture of an IFN-gamma-Related Cytokine Provides Insights into Subfunctionalization of Type II IFNs in Teleost Fish.
J Immunol., 209, 2022
7XPL
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BU of 7xpl by Molmil
Crystal structure of a C/D-free RNA-guided RNA 2'-O-methyltransferase
分子名称: BMG3 RNA strand A, BMG3 RNA strand B, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit, ...
著者Wang, J, Ye, K.
登録日2022-05-04
公開日2022-10-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.213 Å)
主引用文献Methylation guide RNAs without box C/D motifs.
Rna, 28, 2022
8JJB
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Crystal structure of T2R-TTL-Y61 complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Yang, J.
登録日2023-05-30
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structure-based design and synthesis of BML284 derivatives: A novel class of colchicine-site noncovalent tubulin degradation agents.
Eur.J.Med.Chem., 268, 2024
8JJC
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Tubulin-Y62
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(6,7-dimethoxy-3,4-dihydro-1~{H}-isoquinolin-2-yl)-6-(3-methoxyphenyl)pyrimidin-2-amine, CALCIUM ION, ...
著者Yang, J.
登録日2023-05-30
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Structure-based design and synthesis of BML284 derivatives: A novel class of colchicine-site noncovalent tubulin degradation agents.
Eur.J.Med.Chem., 268, 2024
7CPX
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Lovastatin nonaketide synthase
分子名称: Lovastatin nonaketide synthase, polyketide synthase component, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Wang, J, Wang, Z.
登録日2020-08-08
公開日2021-01-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Structural basis for the biosynthesis of lovastatin.
Nat Commun, 12, 2021
8JB4
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lipopolysaccharide-binding domain-LBDB
分子名称: Antilipopolysaccharide factor D
著者Huang, J, Qin, Z.
登録日2023-05-08
公開日2024-03-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Machine learning and genetic algorithm-guided directed evolution for the development of small-molecule antibiotics originating from antimicrobial peptides
To Be Published
4GPS
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BU of 4gps by Molmil
Crystal Structure of K. lactis Dxo1 (YDR370C)
分子名称: CITRIC ACID, KLLA0E02245p
著者Chang, J.H, Chiba, K, Tong, L.
登録日2012-08-21
公開日2012-09-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dxo1 is a new type of eukaryotic enzyme with both decapping and 5'-3' exoribonuclease activity.
Nat.Struct.Mol.Biol., 19, 2012
4GPU
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BU of 4gpu by Molmil
Crystal structure of K. lactis Dxo1 (YDR370C) in complex with manganese
分子名称: KLLA0E02245p, MANGANESE (II) ION
著者Chang, J.H, Chiba, K, Tong, L.
登録日2012-08-21
公開日2012-09-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Dxo1 is a new type of eukaryotic enzyme with both decapping and 5'-3' exoribonuclease activity.
Nat.Struct.Mol.Biol., 19, 2012
3CFR
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BU of 3cfr by Molmil
Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 2
分子名称: CALCIUM ION, CHLORIDE ION, DNA (5'-D(*DGP*DCP*DGP*DGP*DAP*DCP*DTP*DGP*DCP*DTP*DTP*DAP*(DOC))-3'), ...
著者Wang, J, Klimenko, D, Wang, M, Steitz, T.A, Konigsberg, W.H.
登録日2008-03-04
公開日2009-03-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Insights into base selectivity from the structures of an RB69 DNA Polymerase triple mutant
To be Published
2NWM
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BU of 2nwm by Molmil
Solution structure of the first SH3 domain of human Vinexin and its interaction with the peptides from Vinculin
分子名称: Vinexin
著者Zhang, J, Yao, B, Wu, J, Shi, Y.
登録日2006-11-15
公開日2007-04-24
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the first SH3 domain of human vinexin and its interaction with vinculin peptides
Biochem.Biophys.Res.Commun., 357, 2007
3Q53
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Structure of phosphorylated PAK1 kinase domain in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Serine/threonine-protein kinase PAK 1
著者Wang, J, Wu, J.-W, Wang, Z.-X.
登録日2010-12-26
公開日2011-12-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural insights into the autoactivation mechanism of p21-activated protein kinase
Structure, 19, 2011
3NTG
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BU of 3ntg by Molmil
Crystal structure of COX-2 with selective compound 23d-(R)
分子名称: (2R)-6,8-dichloro-7-(2-methylpropoxy)-2-(trifluoromethyl)-2H-chromene-3-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wang, J.L, Limburg, D, Graneto, M.J, Carter, J.C, Talley, J.J, Kiefer, J.R.
登録日2010-07-04
公開日2010-10-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The novel benzopyran class of selective cyclooxygenase-2 inhibitors. Part 2: The second clinical candidate having a shorter and favorable human half-life.
Bioorg.Med.Chem.Lett., 20, 2010
5YYS
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BU of 5yys by Molmil
Cryo-EM structure of L-fucokinase, GDP-fucose pyrophosphorylase (FKP)in Bacteroides fragilis
分子名称: L-fucokinase, L-fucose-1-P guanylyltransferase
著者Wang, J, Hu, H, Liu, Y, Zhou, Q, Wu, P, Yan, N, Wang, H.W, Wu, J.W, Sun, L.
登録日2017-12-11
公開日2018-12-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structure of L-fucokinase/GDP-fucose pyrophosphorylase (FKP) in Bacteroides fragilis.
Protein Cell, 10, 2019
7W1S
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BU of 7w1s by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-007
分子名称: Nanobody Nb-007, Spike protein S1
著者Yang, J, Lin, S, Sun, H.L, Lu, G.W.
登録日2021-11-20
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献A Potent Neutralizing Nanobody Targeting the Spike Receptor-Binding Domain of SARS-CoV-2 and the Structural Basis of Its Intimate Binding.
Front Immunol, 13, 2022
7WSB
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BU of 7wsb by Molmil
The ternary complex structure of FtmOx1 with a-ketoglutarate and 13-oxo-fumitremorgin B
分子名称: 13-Oxofumitremorgin B, 2-OXOGLUTARIC ACID, COBALT (II) ION, ...
著者Wang, J, Wang, X.Y, Wang, Y.Y, Yan, W.P.
登録日2022-01-28
公開日2022-07-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Dissecting the Mechanism of the Nonheme Iron Endoperoxidase FtmOx1 Using Substrate Analogues.
Jacs Au, 2, 2022
7KGJ
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BU of 7kgj by Molmil
Crystal structure of synthetic nanobody (Sb45) complexes with SARS-CoV-2 receptor binding domain
分子名称: Sb45, Sybody-45, Synthetic Nanobody, ...
著者Jiang, J, Ahmad, J, Natarajan, K, Boyd, L.F, Margulies, D.H.
登録日2020-10-16
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of synthetic nanobody-SARS-CoV-2 receptor-binding domain complexes reveal distinct sites of interaction.
J.Biol.Chem., 297, 2021
6CWE
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BU of 6cwe by Molmil
Structure of alpha-GSA[8,6P] bound by CD1d and in complex with the Va14Vb8.2 TCR
分子名称: (5R,6S,7S)-5,6-dihydroxy-7-(octanoylamino)-N-(6-phenylhexyl)-8-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}octanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wang, J, Zajonc, D.
登録日2018-03-30
公開日2019-04-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Glycolipid recognition by iNKT cells
To Be Published
7KLW
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BU of 7klw by Molmil
Crystal structure of synthetic nanobody (Sb45+Sb68) complexes with SARS-CoV-2 receptor binding domain
分子名称: SB45, Synthetic Nanobody, SB68, ...
著者Jiang, J, Ahmad, J, Natarajan, K, Boyd, L.F, Margulies, D.H.
登録日2020-11-01
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of synthetic nanobody-SARS-CoV-2 receptor-binding domain complexes reveal distinct sites of interaction.
J.Biol.Chem., 297, 2021
7DGD
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BU of 7dgd by Molmil
apo state of class C GPCR
分子名称: Metabotropic glutamate receptor 1
著者Zhang, J.Y, Wu, L.J, Luo, F, Hua, T, Liu, Z.J.
登録日2020-11-11
公開日2021-09-22
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Structural insights into the activation initiation of full-length mGlu1.
Protein Cell, 12, 2021
7DGE
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intermediate state of class C GPCR
分子名称: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, Metabotropic glutamate receptor 1, nanobody
著者Zhang, J.Y, Wu, L.J, Luo, F, Hua, T, Liu, Z.J.
登録日2020-11-11
公開日2021-09-22
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Structural insights into the activation initiation of full-length mGlu1.
Protein Cell, 12, 2021
5GTN
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Human PPARgamma ligand binding dmain complexed with R35
分子名称: 2-[4-[5-[(1~{R})-1-[(3,5-dimethoxyphenyl)carbamoyl-(phenylmethyl)carbamoyl]oxypropyl]-1,2-oxazol-3-yl]phenoxy]-2-methyl-propanoic acid, Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
著者Jang, J.Y, Suh, S.W.
登録日2016-08-22
公開日2017-07-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for differential activities of enantiomeric PPAR gamma agonists: Binding of S35 to the alternate site.
Biochim. Biophys. Acta, 1865, 2017
3EY4
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Further studies with the 2-amino-1,3-thiazol-4(5H)-one class of 11-hydroxysteroid dehydrogenase type 1 (11-HSD1) inhibitors: Reducing pregnane X receptor (PXR) activity and exploring activity in a monkey pharmacodynamic model
分子名称: (5S)-2-{[(1S)-1-(4-fluorophenyl)ethyl]amino}-5-(1-hydroxy-1-methylethyl)-5-methyl-1,3-thiazol-4(5H)-one, 11-beta-Hydroxysteroid Dehydrogenase 1, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zhang, J.D, Jordan, S.R, Li, V.
登録日2008-10-17
公開日2008-11-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Further studies with the 2-amino-1,3-thiazol-4(5H)-one class of 11-hydroxysteroid dehydrogenase type 1 (11-HSD1) inhibitors: Reducing pregnane X receptor (PXR) activity and exploring activity in a monkey pharmacodynamic model
To be Published, 2008

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件を2024-07-10に公開中

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