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PDB: 4123 results

8TS2
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BU of 8ts2 by Molmil
Cryo-EM structure of human MRS2 with EDTA
Descriptor: Magnesium transporter MRS2 homolog, mitochondrial, Soluble cytochrome b562 fusion protein
Authors:He, Z, Mount, J.W, Zhang, J, Yuan, P.
Deposit date:2023-08-10
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Human mitochondrial MRS2 is a Ca2+-regulated nonselective cation channel
To Be Published
5XPA
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BU of 5xpa by Molmil
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 9'U10' on the target strand
Descriptor: DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3'), MAGNESIUM ION, RNA (5'-R(P*AP*UP*AP*CP*AP*AP*CP*CP*GP*UP*UP*CP*UP*AP*CP*UP*CP*CP*G)-3'), ...
Authors:Sheng, G, Gogakos, T, Wang, J, Zhao, H, Serganov, A, Juranek, S, Tuschl, T, Patel, J.D, Wang, Y.
Deposit date:2017-06-01
Release date:2018-04-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes.
Nucleic Acids Res., 45, 2017
3LAF
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BU of 3laf by Molmil
Structure of DCC, a netrin-1 receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Deleted in Colorectal Cancer, SULFATE ION, ...
Authors:Chen, Q, Liu, J.-H, Wang, J.-H.
Deposit date:2010-01-06
Release date:2011-03-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:N-terminal horseshoe conformation of DCC is functionally required for axon guidance and might be shared by other neural receptors.
J.Cell.Sci., 126, 2013
5GP4
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BU of 5gp4 by Molmil
Lactobacillus brevis CGMCC 1306 Glutamate decarboxylase
Descriptor: Glutamate decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Mei, L, Huang, J.
Deposit date:2016-07-31
Release date:2017-08-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Lactobacillus brevis CGMCC 1306 glutamate decarboxylase: Crystal structure and functional analysis.
Biochem. Biophys. Res. Commun., 503, 2018
5JIQ
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BU of 5jiq by Molmil
Crystal Structure of Human Transthyretin in Complex with 2,2',4,4'-tetrahydroxybenzophenone (BP2)
Descriptor: GLYCEROL, SODIUM ION, Transthyretin, ...
Authors:Begum, A, Zhang, J, Olofsson, A, Andersson, P, Sauer-Eriksson, A.E.
Deposit date:2016-04-22
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure-Based Virtual Screening Protocol for in Silico Identification of Potential Thyroid Disrupting Chemicals Targeting Transthyretin.
Environ. Sci. Technol., 50, 2016
3L5H
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BU of 3l5h by Molmil
Crystal structure of the full ectodomain of human gp130: New insights into the molecular assembly of receptor complexes
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-6 receptor subunit beta, SULFATE ION, ...
Authors:Xu, Y, Garrett, T.P.J, Zhang, J.G.
Deposit date:2009-12-21
Release date:2010-05-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal structure of the entire ectodomain of gp130: insights into the molecular assembly of the tall cytokine receptor complexes.
J.Biol.Chem., 285, 2010
5NY8
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BU of 5ny8 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with aminoguanidine
Descriptor: AMINOGUANIDINE, MAGNESIUM ION, RNA (41-MER), ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-11
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NZ6
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BU of 5nz6 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with guanidine in space group P3212.
Descriptor: GUANIDINE, RNA (41-MER)
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-12
Release date:2017-10-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
6IIM
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BU of 6iim by Molmil
USP14 catalytic domain with IU1-206
Descriptor: 1-[1-(4-chlorophenyl)-2,5-dimethyl-1H-pyrrol-3-yl]-2-(4-hydroxypiperidin-1-yl)ethan-1-one, Ubiquitin carboxyl-terminal hydrolase 14
Authors:Mei, Z.Q, Wang, J.W, Wang, F, Wang, Y.W.
Deposit date:2018-10-07
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockade.
Cell Res., 28, 2018
5X6H
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BU of 5x6h by Molmil
Crystal Structure of SMAD5-MH1/GC-BRE DNA complex
Descriptor: DNA (5'-D(P*GP*TP*AP*TP*GP*GP*CP*GP*CP*CP*AP*TP*AP*C)-3'), Mothers against decapentaplegic homolog 5, ZINC ION
Authors:Chai, N, Wang, J, Wang, Z.X, Wu, J.W.
Deposit date:2017-02-22
Release date:2017-03-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for the Smad5 MH1 domain to recognize different DNA sequences.
Nucleic Acids Res., 43, 2015
5X83
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BU of 5x83 by Molmil
Structure of DCC FN456 domains
Descriptor: Netrin receptor DCC
Authors:Finci, F.I, Xiao, J, Wang, J.
Deposit date:2017-02-28
Release date:2017-09-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.997 Å)
Cite:Structure of unliganded membrane-proximal domains FN4-FN5-FN6 of DCC
Protein Cell, 8, 2017
5G0M
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BU of 5g0m by Molmil
beta-glucuronidase with an activity-based probe (N-acyl cyclophellitol aziridine) bound
Descriptor: (1S,2R,3R,4S,6S)-6-[(8-azidooctanoyl)amino]-2,3,4-trihydroxycyclohexane-1-carboxylate, BETA-GLUCURONIDASE, PHOSPHATE ION
Authors:Jin, Y, Wu, L, Jiang, J.B, Overkleeft, H.S, Davies, G.J.
Deposit date:2016-03-21
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Structure of a Bacteria Beta-Glucuronidase in Gh79 Family
To be Published
6IIN
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BU of 6iin by Molmil
USP14 catalytic domain with IU1-248
Descriptor: 4-{3-[(4-hydroxypiperidin-1-yl)acetyl]-2,5-dimethyl-1H-pyrrol-1-yl}benzonitrile, Ubiquitin carboxyl-terminal hydrolase 14
Authors:Mei, Z.Q, Wang, J.W, Wang, F, Wang, Y.W.
Deposit date:2018-10-07
Release date:2018-12-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockade.
Cell Res., 28, 2018
5X6G
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BU of 5x6g by Molmil
Crystal Structure of SMAD5-MH1/palindromic SBE DNA complex
Descriptor: DNA (5'-D(P*AP*TP*CP*AP*GP*TP*CP*TP*AP*GP*AP*CP*AP*TP*A)-3'), DNA (5'-D(P*GP*TP*AP*TP*GP*TP*CP*TP*AP*GP*AP*CP*TP*GP*A)-3'), Mothers against decapentaplegic homolog 5, ...
Authors:Chai, N, Wang, J, Wang, Z.X, Wu, J.W.
Deposit date:2017-02-21
Release date:2017-03-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural basis for the Smad5 MH1 domain to recognize different DNA sequences.
Nucleic Acids Res., 43, 2015
5X6M
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BU of 5x6m by Molmil
Crystal Structure of SMAD5-MH1 in complex with a composite DNA sequence
Descriptor: DNA (5'-D(P*AP*TP*CP*AP*GP*AP*CP*TP*GP*CP*CP*GP*GP*CP*AP*GP*TP*CP*TP*AP*TP*A)-3'), DNA (5'-D(P*TP*TP*AP*TP*AP*GP*AP*CP*TP*GP*CP*CP*GP*GP*CP*AP*GP*TP*CP*TP*GP*A)-3'), Mothers against decapentaplegic homolog 5, ...
Authors:Chai, N, Wang, J, Wang, Z.X, Wu, J.W.
Deposit date:2017-02-22
Release date:2017-03-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for the Smad5 MH1 domain to recognize different DNA sequences.
Nucleic Acids Res., 43, 2015
6LJG
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BU of 6ljg by Molmil
Crassostrea gigas ferritin mutant-D119G
Descriptor: FE (III) ION, Ferritin
Authors:Li, H, Zang, J, Tan, X, Wang, Z, Du, M.
Deposit date:2019-12-15
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Crassostrea gigas ferritin mutant-D119G
To Be Published
3PVB
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BU of 3pvb by Molmil
Crystal structure of (73-244)RIa:C holoenzyme of cAMP-dependent Protein kinase
Descriptor: GLYCEROL, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Boettcher, A.J, Wu, J, Kim, C, Yang, J, Bruystens, J, Cheung, N, Pennypacker, J.K, Blumenthal, D.A, Kornev, A.P, Taylor, S.S.
Deposit date:2010-12-06
Release date:2011-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of (73-244)RIa:C holoenzyme of cAMP-dependent Protein kinase
Structure, 19, 2011
5XOU
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BU of 5xou by Molmil
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 7T8 on the guide strand
Descriptor: DNA (5'-D(*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3'), DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*TP*GP*GP*TP*TP*GP*T)-3'), MAGNESIUM ION, ...
Authors:Sheng, G, Wang, J, Zhao, H, Wang, Y.
Deposit date:2017-05-31
Release date:2017-10-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes
Nucleic Acids Res., 45, 2017
6R06
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BU of 6r06 by Molmil
T. CRUZI FPPS IN COMPLEX WITH (3S,4S)-4-(3,4-dimethylphenoxy)-1-(prop-2-yn-1-yl)piperidin-3-ol
Descriptor: (3~{S},4~{S})-4-(3,4-dimethylphenoxy)-1-prop-2-ynyl-piperidin-3-ol, ACETATE ION, Farnesyl diphosphate synthase, ...
Authors:Petrick, J.K, Muenzker, L, Schleberger, C, Wolfgang, J.
Deposit date:2019-03-12
Release date:2020-04-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.559 Å)
Cite:Targeting farnesyl pyrophosphate synthase of Trypanosoma cruzi by fragment-based lead discovery
Thesis, 2019
4RNG
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BU of 4rng by Molmil
Crystal structure of a bacterial homologue of SWEET transporters
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MtN3/saliva family, SULFATE ION
Authors:Hu, Q, Wang, J, Yan, C, Yan, N.
Deposit date:2014-10-24
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a bacterial homologue of SWEET transporters.
Cell Res., 24, 2014
5XPG
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BU of 5xpg by Molmil
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 6'U7' on the target strand
Descriptor: 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*A P*GP*T)-3', 5'-R(*UP*AP*U*AP*CP*AP*AP*CP*CP*UP*AP*CP*AP*UP*AP*CP*CP*UP*CP* G)-3', MAGNESIUM ION, ...
Authors:Sheng, G, Gogakos, T, Wang, J, Zhao, H, Serganov, A, Juranek, S, Tuschl, T, Patel, J.D, Wang, Y.
Deposit date:2017-06-02
Release date:2018-04-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes.
Nucleic Acids Res., 45, 2017
8H1D
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BU of 8h1d by Molmil
Solid-state NMR Structure of Aquaporin Z in its Native Cellular Membranes
Descriptor: Aquaporin Z
Authors:Xie, H, Zhao, Y, Zhao, W, Chen, Y, Liu, M, Yang, J.
Deposit date:2022-10-02
Release date:2022-11-09
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Solid-state NMR structure determination of a membrane protein in E. coli cellular inner membrane.
Sci Adv, 9, 2023
5HNK
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BU of 5hnk by Molmil
Crystal structure of T5Fen in complex intact substrate and metal ions.
Descriptor: DNA (5'-D(*AP*AP*AP*AP*GP*CP*GP*TP*AP*CP*GP*C)-3'), Exodeoxyribonuclease, GLYCEROL, ...
Authors:Almalki, F.A, Feng, M, Zhang, J, Sedelnikova, S.E, Rafferty, J.B, Sayers, J.R, Artymiuk, P.J.
Deposit date:2016-01-18
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Direct observation of DNA threading in flap endonuclease complexes.
Nat.Struct.Mol.Biol., 23, 2016
2Z3B
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BU of 2z3b by Molmil
Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus
Descriptor: ATP-dependent protease hslV, SODIUM ION
Authors:Rho, S.H, Park, H.H, Kang, G.B, Lim, Y.J, Kang, M.S, Lim, B.K, Seong, I.S, Chung, C.H, Wang, J, Eom, S.H.
Deposit date:2007-06-03
Release date:2008-03-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Bacillus subtilis CodW, a noncanonical HslV-like peptidase with an impaired catalytic apparatus
Proteins, 71, 2007
6LIJ
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BU of 6lij by Molmil
Crassostrea gigas ferritin
Descriptor: Ferritin, MAGNESIUM ION
Authors:Li, H, Zang, J, Tan, X, Wang, Z, Du, M.
Deposit date:2019-12-11
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crassostrea gigas ferritin
To Be Published

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