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PDB: 76 results

4LGY
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BU of 4lgy by Molmil
Importance of Hydrophobic Cavities in Allosteric Regulation of Formylglycinamide Synthetase: Insight from Xenon Trapping and Statistical Coupling Analysis
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Tanwar, A.S, Goyal, V.D, Choudhary, D, Panjikar, S, Anand, R.
Deposit date:2013-06-30
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Importance of hydrophobic cavities in allosteric regulation of formylglycinamide synthetase: insight from xenon trapping and statistical coupling analysis
Plos One, 8, 2013
7V2Q
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BU of 7v2q by Molmil
T.thermophilus 30S ribosome with KsgA, class K6
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
4L78
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BU of 4l78 by Molmil
Xenon Trapping and Statistical Coupling Analysis Uncover Regions Important for Structure and Function of Multidomain Protein StPurL
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Tanwar, A.S, Goyal, V.D, Choudhary, D, Panjikar, S, Anand, R.
Deposit date:2013-06-13
Release date:2013-12-11
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Importance of hydrophobic cavities in allosteric regulation of formylglycinamide synthetase: insight from xenon trapping and statistical coupling analysis
Plos One, 8, 2013
7V2N
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BU of 7v2n by Molmil
T.thermophilus 30S ribosome with KsgA, class K2
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2O
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BU of 7v2o by Molmil
T.thermophilus 30S ribosome with KsgA, class K4
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2M
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BU of 7v2m by Molmil
T.thermophilus 30S ribosome with KsgA, class K1k4
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2L
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BU of 7v2l by Molmil
T.thermophilus 30S ribosome with KsgA, class K1k2
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2P
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BU of 7v2p by Molmil
T.thermophilus 30S ribosome with KsgA, class K5
Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
Deposit date:2021-08-09
Release date:2022-04-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
4MGH
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BU of 4mgh by Molmil
Importance of Hydrophobic Cavities in Allosteric Regulation of Formylglycinamide Synthetase: Insight from Xenon Trapping and Statistical Coupling Analysis
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Tanwar, A.S, Goyal, V.D, Choudhary, D, Panjikar, S, Anand, R.
Deposit date:2013-08-28
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Importance of hydrophobic cavities in allosteric regulation of formylglycinamide synthetase: insight from xenon trapping and statistical coupling analysis
Plos One, 8, 2013
1OTY
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BU of 1oty by Molmil
Native PNP +ALLO
Descriptor: 6-METHYLPURINE, PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Ealick, S.E, Bennett, E.M, Anand, R, Secrist, J.A, Parker, W.B, Hassan, A.E, Allan, P.W, McPherson, D.T, Sorscher, E.J.
Deposit date:2003-03-23
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Designer gene therapy using an Escherichia coli purine nucleoside phosphorylase/prodrug system.
Chem.Biol., 10, 2003
1OTX
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BU of 1otx by Molmil
Purine Nucleoside Phosphorylase M64V mutant
Descriptor: PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Ealick, S.E, Bennett, E.M, Anand, R, Secrist, J.A, Parker, W.B, Hassan, A.E, Allan, P.W, McPherson, D.T, Sorscher, E.J.
Deposit date:2003-03-23
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Designer gene therapy using an Escherichia coli purine nucleoside phosphorylase/prodrug system.
Chem.Biol., 10, 2003
7VQF
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BU of 7vqf by Molmil
Phenol binding protein, MopR
Descriptor: ACETATE ION, PHENOL, Phenol sensing regulator, ...
Authors:Singh, J, Ray, S, Anand, R.
Deposit date:2021-10-19
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Phenol sensing in nature is modulated via a conformational switch governed by dynamic allostery.
J.Biol.Chem., 298, 2022
1OVG
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BU of 1ovg by Molmil
M64V PNP +MePdr
Descriptor: 9-(2-DEOXY-BETA-D-RIBOFURANOSYL)-6-METHYLPURINE, PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Ealick, S.E, Bennett, E.M, Anand, R, Secrist, J.A, Parker, P.W, Hassan, A.E, Allan, P.W, McPherson, D.T, Sorscher, E.J.
Deposit date:2003-03-26
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Designer gene therapy using an Escherichia coli purine nucleoside phosphorylase/prodrug system.
Chem.Biol., 10, 2003
1OUM
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BU of 1oum by Molmil
M64V PNP +Talo
Descriptor: 9-(6-DEOXY-ALPHA-L-TALOFURANOSYL)-6-METHYLPURINE, PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Ealick, S.E, Bennett, E.M, Anand, R, Secrist, J.A, Parker, W.B, Hassan, A.E, Allan, P.W, McPherson, D.T, Sorscher, E.J.
Deposit date:2003-03-24
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Designer gene therapy using an Escherichia coli purine nucleoside phosphorylase/prodrug system.
Chem.Biol., 10, 2003
1OU4
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BU of 1ou4 by Molmil
Native PNP +Talo
Descriptor: 6-METHYLPURINE, PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Ealick, S.E, Bennett, E.M, Anand, R, Secrist, J.A, Parker, W.B, Hassan, A.E, Allan, P.W, McPherson, D.T, Sorscher, E.J.
Deposit date:2003-03-24
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Designer gene therapy using an Escherichia coli purine nucleoside phosphorylase/prodrug system.
Chem.Biol., 10, 2003
1OV6
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BU of 1ov6 by Molmil
M64V PNP + ALLO
Descriptor: 9-(6-DEOXY-BETA-D-ALLOFURANOSYL)-6-METHYLPURINE, PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Ealick, S.E, Bennett, E.M, Anand, R, Secrist, J.A, Parker, P.W, Hassan, A.E, Allan, P.W, McPherson, D.T, Sorscher, E.J.
Deposit date:2003-03-25
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Designer gene therapy using an Escherichia coli purine nucleoside phosphorylase/prodrug system.
Chem.Biol., 10, 2003
4LCO
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BU of 4lco by Molmil
Crystal structure of NE0047 with complex with substrate ammeline
Descriptor: 4,6-diamino-1,3,5-triazin-2-ol, Cytidine and deoxycytidylate deaminase zinc-binding region, ZINC ION
Authors:Bitra, A, Biswas, A, Anand, R.
Deposit date:2013-06-22
Release date:2014-01-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of the substrate specificity of cytidine deaminase superfamily Guanine deaminase
Biochemistry, 52, 2013
4LCP
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BU of 4lcp by Molmil
Crytsal structure of NE0047 in complex with 2,6-diaminopurine
Descriptor: 9H-PURINE-2,6-DIAMINE, Cytidine and deoxycytidylate deaminase zinc-binding region, ZINC ION
Authors:Bitra, A, Biswas, A, Anand, R.
Deposit date:2013-06-22
Release date:2014-01-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of the substrate specificity of cytidine deaminase superfamily Guanine deaminase
Biochemistry, 52, 2013
4LC5
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BU of 4lc5 by Molmil
Structural basis of substrate specificity of CDA superfamily guanine deaminase
Descriptor: 1,2-ETHANEDIOL, 9-METHYLGUANINE, Cytidine and deoxycytidylate deaminase zinc-binding region, ...
Authors:Bitra, A, Biswas, A, Anand, R.
Deposit date:2013-06-21
Release date:2014-01-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural basis of the substrate specificity of cytidine deaminase superfamily Guanine deaminase
Biochemistry, 52, 2013
3UGJ
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BU of 3ugj by Molmil
Formyl Glycinamide ribonucletide amidotransferase from Salmonella Typhimurum: Role of the ATP complexation and glutaminase domain in catalytic coupling
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoribosylformylglycinamidine synthase, ...
Authors:Morar, M, Tanwar, A.S, Panjikar, S, Anand, R.
Deposit date:2011-11-02
Release date:2012-06-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Formylglycinamide ribonucleotide amidotransferase from Salmonella typhimurium: role of ATP complexation and the glutaminase domain in catalytic coupling
Acta Crystallogr.,Sect.D, 68, 2012
7CPH
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BU of 7cph by Molmil
Crystal structure of tRNA adenosine deaminase from Bacillus subtilis
Descriptor: GLYCEROL, ZINC ION, tRNA-specific adenosine deaminase
Authors:Gaded, V, Mariam, J, Anand, R.
Deposit date:2020-08-07
Release date:2021-06-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Deciphering protein microenvironment by using a cysteine specific switch-ON fluorescent probe.
Org.Biomol.Chem., 19, 2021
4LD2
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BU of 4ld2 by Molmil
Crystal structure of NE0047 in complex with cytidine
Descriptor: 1,2-ETHANEDIOL, 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, Cytidine and deoxycytidylate deaminase zinc-binding region, ...
Authors:Bitra, A, Biswas, A, Anand, R.
Deposit date:2013-06-24
Release date:2014-01-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis of the substrate specificity of cytidine deaminase superfamily Guanine deaminase
Biochemistry, 52, 2013
4LD4
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BU of 4ld4 by Molmil
Crystal structure of NE0047 in complex with cytosine
Descriptor: 6-AMINOPYRIMIDIN-2(1H)-ONE, Cytidine and deoxycytidylate deaminase zinc-binding region, ZINC ION
Authors:Bitra, A, Biswas, A, Anand, R.
Deposit date:2013-06-24
Release date:2014-01-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of the substrate specificity of cytidine deaminase superfamily Guanine deaminase
Biochemistry, 52, 2013
1T3T
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BU of 1t3t by Molmil
Structure of Formylglycinamide synthetase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoribosylformylglycinamidine synthase, ...
Authors:Ealick, S.E, Anand, R, Hoskin, A.A, Stubbe, J.
Deposit date:2004-04-27
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Domain Organization of Salmonella typhimurium Formylglycinamide Ribonucleotide Amidotransferase Revealed by X-ray crystallography
Biochemistry, 43, 2004
5FIQ
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BU of 5fiq by Molmil
Exonuclease domain-containing 1 (Exd1) in the native conformation
Descriptor: EXD1
Authors:Yang, Z, Chen, K.M, Pandey, R.R, Homolka, D, Reuter, M, Rodino Janeiro, B.K, Sachidanandam, R, Fauvarque, M.O, McCarthy, A.A, Pillai, R.S.
Deposit date:2015-10-01
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Piwi Slicing and Exd1 Drive Biogenesis of Nuclear Pirnas from Cytosolic Targets of the Mouse Pirna Pathway
Mol.Cell, 61, 2016

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