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PDB: 135 results

1G8Z
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BU of 1g8z by Molmil
HIS57ALA MUTANT OF CHOLERA TOXIN B-PENATMER
Descriptor: CHOLERA TOXIN B PROTEIN, beta-D-galactopyranose
Authors:Aman, A.T, Fraser, S, Merritt, E.A, Rodigherio, C, Kenny, M.
Deposit date:2000-11-21
Release date:2001-07-25
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:A mutant cholera toxin B subunit that binds GM1- ganglioside but lacks immunomodulatory or toxic activity.
Proc.Natl.Acad.Sci.USA, 98, 2001
1W3V
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BU of 1w3v by Molmil
Isopenicillin N synthase d-(L-a-aminoadipoyl)-(3R)-methyl-L-cysteine D-a-hydroxyisovaleryl ester complex (anaerobic)
Descriptor: FE (II) ION, ISOPENICILLIN N SYNTHETASE, N~6~-METHYL-6-OXO-L-LYSINE - 2-[(3-MERCAPTOBUTANOYL)OXY]-3-METHYLBUTANOIC ACID
Authors:Daruzzaman, A, Clifton, I.J, Rutledge, P.J.
Deposit date:2004-07-20
Release date:2005-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Unexpected Oxidation of a Depsipeptide Substrate Analogue in Crystalline Isopenicillin N Synthase.
Chembiochem, 7, 2006
2LAS
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BU of 2las by Molmil
Molecular Determinants of Paralogue-Specific SUMO-SIM Recognition
Descriptor: M-IR2_peptide, Small ubiquitin-related modifier 1
Authors:Namanja, A, Li, Y, Su, Y, Wong, S, Lu, J, Colson, L, Wu, C, Li, S, Chen, Y.
Deposit date:2011-03-20
Release date:2011-12-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Insights into High Affinity Small Ubiquitin-like Modifier (SUMO) Recognition by SUMO-interacting Motifs (SIMs) Revealed by a Combination of NMR and Peptide Array Analysis.
J.Biol.Chem., 287, 2012
8HUC
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BU of 8huc by Molmil
Crystal structure of PaIch (Pec1)
Descriptor: GLYCEROL, MaoC_dehydrat_N domain-containing protein, NITRATE ION
Authors:Pramanik, A, Datta, S.
Deposit date:2022-12-23
Release date:2023-12-27
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.984 Å)
Cite:Structural and functional insights of itaconyl-CoA hydratase from Pseudomonas aeruginosa highlight a novel N-terminal hotdog fold.
Febs Lett., 598, 2024
8GOG
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BU of 8gog by Molmil
Structure of streptavidin mutant (S112Y-K121E) complexed with biotin-cyclopentadienyl-rhodium (III)(Cp*-Rh(III))
Descriptor: CHLORIDE ION, GLYCEROL, RHODIUM(III) ION, ...
Authors:Sairaman, A, Mukherjee, P, Maiti, D, Bhaumik, P.
Deposit date:2022-08-24
Release date:2024-02-28
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Enantiodivergent synthesis of isoindolones catalysed by a Rh(III)-based artificial metalloenzyme
Nat Synth, 3, 2024
8JI1
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BU of 8ji1 by Molmil
Crystal structure of Ham1 from Plasmodium falciparum
Descriptor: Inosine triphosphate pyrophosphatase
Authors:Pramanik, A, Datta, S.
Deposit date:2023-05-25
Release date:2024-05-29
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-function analysis of nucleotide housekeeping protein HAM1 from human malaria parasite Plasmodium falciparum.
Febs J., 2024
8I2K
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BU of 8i2k by Molmil
Crystal structure of transcriptional regulator pvrA from Pseudomonas aeruginosa.
Descriptor: Putative transcriptional regulator, TetR family
Authors:Pramanik, A, Datta, S.
Deposit date:2023-01-14
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Crystal structure of transcriptional regulator pvrA from Pseudomonas aeruginosa.
To Be Published
4BB3
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BU of 4bb3 by Molmil
Isopenicillin N synthase with the dipeptide substrate analogue AhC
Descriptor: (2S)-2-azanyl-6-oxidanylidene-6-[[(2S)-1-oxidanyl-1-oxidanylidene-4-sulfanyl-butan-2-yl]amino]hexanoic acid, FE (III) ION, ISOPENICILLIN N SYNTHASE, ...
Authors:Daruzzaman, A, Clifton, I.J, Rutledge, P.J.
Deposit date:2012-09-19
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Crystal Structure of Isopenicillin N Synthase with a Dipeptide Substrate Analogue.
Arch.Biochem.Biophys., 530, 2013
1W3X
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BU of 1w3x by Molmil
Isopenicillin N synthase d-(L-a-aminoadipoyl)-(3R)-methyl-L-cysteine D-a-hydroxyisovaleryl ester complex (Oxygen exposed 5 minutes 20 bar)
Descriptor: FE (II) ION, ISOPENICILLIN N SYNTHETASE, N~6~-[(1R)-1-({[(1R,2R)-1-CARBOXY-3-HYDROXY-2-METHYLPROPYL]OXY}CARBONYL)-2-MERCAPTOPROP-2-EN-1-YL]-6-OXO-L-LYSINE
Authors:Daruzzaman, A, Clifton, I.J, Rutledge, P.J.
Deposit date:2004-07-20
Release date:2005-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Unexpected Oxidation of a Depsipeptide Substrate Analogue in Crystalline Isopenicillin N Synthase.
Chembiochem, 7, 2006
4G7E
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BU of 4g7e by Molmil
Crystal structure of pigeon pea urease
Descriptor: MAGNESIUM ION, NICKEL (II) ION, urease
Authors:Balasubramanian, A, Ponnuraj, K.
Deposit date:2012-07-20
Release date:2013-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional studies on urease from pigeon pea (Cajanus cajan)
Int.J.Biol.Macromol., 58C, 2013
4GOA
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BU of 4goa by Molmil
Crystal structure of jack bean urease inhibited with fluoride
Descriptor: FLUORIDE ION, NICKEL (II) ION, Urease
Authors:Balasubramania, A, Ponnuraj, K.
Deposit date:2012-08-19
Release date:2013-08-21
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of jack bean urease inhibited with fluoride
To be Published
1CNR
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BU of 1cnr by Molmil
CORRELATED DISORDER OF THE PURE PRO22(SLASH)LEU25 FORM OF CRAMBIN AT 150K REFINED TO 1.05 ANGSTROMS RESOLUTION
Descriptor: CRAMBIN, ETHANOL
Authors:Yamano, A, Teeter, M.M.
Deposit date:1993-07-15
Release date:1994-08-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Correlated disorder of the pure Pro22/Leu25 form of crambin at 150 K refined to 1.05-A resolution.
J.Biol.Chem., 269, 1994
3ZKY
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BU of 3zky by Molmil
Isopenicillin N synthase with substrate analogue AhCmC
Descriptor: FE (III) ION, GLYCEROL, ISOPENICILLIN N SYNTHASE, ...
Authors:Daruzzaman, A, Clifton, I.J, Rutledge, P.J.
Deposit date:2013-01-25
Release date:2013-03-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Interaction of Isopenicillin N Synthase with Homologated Substrate Analogues Delta-(L-Alpha-Aminoadipoyl)-L-Homocysteinyl-D-Xaa Characterised by Protein Crystallography.
Chembiochem, 14, 2013
3ZKU
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BU of 3zku by Molmil
Isopenicillin N synthase with substrate analogue AhCV
Descriptor: FE (III) ION, ISOPENICILLIN N SYNTHASE, N-[(5S)-5-amino-5-carboxypentanoyl]-L-homocysteyl-D-valine
Authors:Daruzzaman, A, Clifton, I.J, Rutledge, P.J.
Deposit date:2013-01-24
Release date:2013-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Interaction of Isopenicillin N Synthase with Homologated Substrate Analogues Delta-(L-Alpha-Aminoadipoyl)-L-Homocysteinyl-D-Xaa Characterised by Protein Crystallography.
Chembiochem, 14, 2013
3V1W
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BU of 3v1w by Molmil
Molecular Basis for Multiple Ligand Binding of Calsequestrin and Potential Inhibition by Caffeine and Gallocatecin
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Subramanian, A.K, Nissen, M.N, Lewis, K.M, Sanchez, E.J, Muralidharan, A.K, Kang, C.
Deposit date:2011-12-10
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.908 Å)
Cite:Molecular Basis for Multiple Ligand Binding of Calsequestrin and Potential Inhibition by Caffeine and Gallocatecin
To be Published
7MS7
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BU of 7ms7 by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with (5-((4-(4-chlorophenyl)piperidin-1-yl)sulfonyl)picolinoyl)glycine
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, N-{5-[4-(4-chlorophenyl)piperidine-1-sulfonyl]pyridine-2-carbonyl}glycine, ...
Authors:Mann, M.K, Zepeda-Velazquez, C.A, Alvarez, H.G, Dong, A, Kiyota, T, Aman, A, Arrowsmith, C.H, Al-Awar, R, Harding, R.J, Schapira, M.
Deposit date:2021-05-10
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure-Activity Relationship of USP5 Inhibitors.
J.Med.Chem., 64, 2021
7MS5
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BU of 7ms5 by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with 4-(4-(4-(3,4-difluoro-phenyl)-piperidin-1-ylsulfonyl)-phenyl)-4-oxo-butanoic acid
Descriptor: 1,2-ETHANEDIOL, 4-{4-[4-(3,4-difluorophenyl)piperidine-1-sulfonyl]phenyl}-4-oxobutanoic acid, CALCIUM ION, ...
Authors:Mann, M.K, Zepeda-Velazquez, C.A, Alvarez, H.G, Dong, A, Kiyota, T, Aman, A, Arrowsmith, C.H, Al-Awar, R, Harding, R.J, Schapira, M, Structural Genomics Consortium (SGC)
Deposit date:2021-05-10
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure-Activity Relationship of USP5 Inhibitors.
J.Med.Chem., 64, 2021
7MS6
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BU of 7ms6 by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with (2-fluoro-4-((4-phenylpiperidin-1-yl)sulfonyl)benzoyl)glycine
Descriptor: 1,2-ETHANEDIOL, N-[2-fluoro-4-(4-phenylpiperidine-1-sulfonyl)benzoyl]glycine, SULFATE ION, ...
Authors:Mann, M.K, Zepeda-Velazquez, C.A, Alvarez, H.G, Dong, A, Kiyota, T, Aman, A, Arrowsmith, C.H, Al-Awar, R, Harding, R.J, Schapira, M.
Deposit date:2021-05-10
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-Activity Relationship of USP5 Inhibitors.
J.Med.Chem., 64, 2021
3UK6
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BU of 3uk6 by Molmil
Crystal Structure of the Tip48 (Tip49b) hexamer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, RuvB-like 2
Authors:Petukhov, M, Dagkessamanskaja, A, Bommer, M, Barrett, T, Tsaneva, I, Yakimov, A, Queval, R, Shvetsov, A, Khodorkovskiy, M, Kas, E, Grigoriev, M.
Deposit date:2011-11-09
Release date:2012-07-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Large-Scale Conformational Flexibility Determines the Properties of AAA+ TIP49 ATPases.
Structure, 20, 2012
5HEY
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BU of 5hey by Molmil
The third PDZ domain from the synaptic protein PSD-95 (G330T mutant) in complex with a C-terminal peptide derived from CRIPT
Descriptor: Cysteine-rich PDZ-binding protein, Disks large homolog 4
Authors:White, K.I, Raman, A.S, Ranganathan, R.
Deposit date:2016-01-06
Release date:2016-11-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
5HFC
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BU of 5hfc by Molmil
The third PDZ domain from the synaptic protein PSD-95 (H372A mutant) in complex with a mutant C-terminal peptide derived from CRIPT (T-2F)
Descriptor: Cysteine-rich PDZ-binding protein, Disks large homolog 4
Authors:White, K.I, Raman, A.S, Ranganathan, R.
Deposit date:2016-01-06
Release date:2016-11-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
5HEB
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BU of 5heb by Molmil
The third PDZ domain from the synaptic protein PSD-95 in complex with a C-terminal peptide derived from CRIPT
Descriptor: Cysteine-rich PDZ-binding protein, Disks large homolog 4, GLYCEROL
Authors:White, K.I, Raman, A.S, Ranganathan, R.
Deposit date:2016-01-05
Release date:2016-11-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
5HDY
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BU of 5hdy by Molmil
The third PDZ domain from the synaptic protein PSD-95
Descriptor: Disks large homolog 4, GLYCEROL
Authors:White, K.I, Raman, A.S, Ranganathan, R.
Deposit date:2016-01-05
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:The third PDZ domain from the synaptic protein PSD-95
To Be Published
6KO7
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BU of 6ko7 by Molmil
Crystal structure of the Ethidium bound RamR determined with XtaLAB Synergy
Descriptor: ETHIDIUM, Putative regulatory protein, SULFATE ION
Authors:Matsumoto, T, Nakashima, R, Yamano, A, Nishino, K.
Deposit date:2019-08-08
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Development of a structure determination method using a multidrug-resistance regulator protein as a framework.
Biochem.Biophys.Res.Commun., 518, 2019
5HF4
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BU of 5hf4 by Molmil
The third PDZ domain from the synaptic protein PSD-95 (H372A mutant)
Descriptor: Disks large homolog 4, GLYCEROL
Authors:White, K.I, Raman, A.S, Ranganathan, R.
Deposit date:2016-01-06
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The third PDZ domain from the synaptic protein PSD-95 (H372A mutant)
To Be Published

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