5HDY

The third PDZ domain from the synaptic protein PSD-95

Summary for 5HDY

Related1BFE 5HEB 5HED 5HET 5HEY 5HF1 5HF4 5HFB 5HFC 5HFD 5HFE 5HFF
DescriptorDisks large homolog 4, GLYCEROL (3 entities in total)
Functional Keywordspdz, glgf, dhr, adhesion, synapse, synaptic density, peptide-binding domain, peptide binding protein
Biological sourceRattus norvegicus (Rat)
Cellular locationCell membrane; Peripheral membrane protein P31016
Total number of polymer chains1
Total molecular weight12830.16
Authors
White, K.I.,Raman, A.S.,Ranganathan, R. (deposition date: 2016-01-05, release date: 2017-01-11)
Primary citation
White, K.I.,Raman, A.S.,Ranganathan, R.
The third PDZ domain from the synaptic protein PSD-95
To Be Published,
Experimental method
X-RAY DIFFRACTION (1.801 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.22461.7%03.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 5hdy
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Molmil generated image of 5hdy
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Molmil generated image of 5hdy
rotated about y axis by 90°