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PDB: 227 results

5L95
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BU of 5l95 by Molmil
Crystal structure of human UBA5 in complex with UFM1 and AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Ubiquitin-fold modifier 1, Ubiquitin-like modifier-activating enzyme 5, ...
Authors:Oweis, W, Padala, P, Wiener, R.
Deposit date:2016-06-09
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Trans-Binding Mechanism of Ubiquitin-like Protein Activation Revealed by a UBA5-UFM1 Complex.
Cell Rep, 16, 2016
1COF
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BU of 1cof by Molmil
YEAST COFILIN, ORTHORHOMBIC CRYSTAL FORM
Descriptor: COFILIN
Authors:Fedorov, A.A, Lappalainen, P, Fedorov, E.V, Drubin, D.G, Almo, S.C.
Deposit date:1996-11-26
Release date:1997-04-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure determination of yeast cofilin.
Nat.Struct.Biol., 4, 1997
5IA8
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BU of 5ia8 by Molmil
Structure of a Ubiquitin like protein with an E1 fragment
Descriptor: Ubiquitin-like modifier-activating enzyme 5,Ubiquitin-fold modifier 1
Authors:Oweis, W, Padala, P, Wiener, R.
Deposit date:2016-02-21
Release date:2017-03-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel insights into the interaction of UBA5 with UFM1 via a UFM1-interacting sequence.
Sci Rep, 7, 2017
3DAW
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BU of 3daw by Molmil
Structure of the actin-depolymerizing factor homology domain in complex with actin
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Paavilainen, V.O, Oksanen, E, Goldman, A, Lappalainen, P.
Deposit date:2008-05-30
Release date:2008-07-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure of the actin-depolymerizing factor homology domain in complex with actin
J.Cell Biol., 182, 2008
2QR2
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BU of 2qr2 by Molmil
HUMAN QUINONE REDUCTASE TYPE 2, COMPLEX WITH MENADIONE
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MENADIONE, PROTEIN (QUINONE REDUCTASE TYPE 2), ...
Authors:Foster, C, Bianchet, M.A, Talalay, P, Amzel, L.M.
Deposit date:1999-04-19
Release date:1999-08-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of human quinone reductase type 2, a metalloflavoprotein.
Biochemistry, 38, 1999
5BNK
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BU of 5bnk by Molmil
Crystal structure of T75C mutant of Triosephosphate isomerase from Plasmodium falciparum
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, Triosephosphate isomerase
Authors:Bandyopadhyay, D, Murthy, M.R.N, Balaram, H, Balaram, P.
Deposit date:2015-05-26
Release date:2015-07-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Probing the role of highly conserved residues in triosephosphate isomerase - analysis of site specific mutants at positions 64 and 75 in the Plasmodial enzyme
Febs J., 282, 2015
5BRB
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BU of 5brb by Molmil
Crystal structure of Q64E mutant of Triosephosphate isomerase from Plasmodium falciparum
Descriptor: SODIUM ION, Triosephosphate isomerase
Authors:Bandyopadhyay, D, Murthy, M.R.N, Balaram, H, Balaram, P.
Deposit date:2015-05-30
Release date:2015-07-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Probing the role of highly conserved residues in triosephosphate isomerase - analysis of site specific mutants at positions 64 and 75 in the Plasmodial enzyme
Febs J., 282, 2015
1XD3
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BU of 1xd3 by Molmil
Crystal structure of UCHL3-UbVME complex
Descriptor: MAGNESIUM ION, METHYL 4-AMINOBUTANOATE, UBC protein, ...
Authors:Misaghi, S, Galardy, P.J, Meester, W.J.N, Ovaa, H, Ploegh, H.L, Gaudet, R.
Deposit date:2004-09-03
Release date:2004-11-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of the Ubiquitin Hydrolase UCH-L3 Complexed with a Suicide Substrate
J.Biol.Chem., 280, 2005
7L6W
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BU of 7l6w by Molmil
SFX structure of the MyD88 TIR domain higher-order assembly
Descriptor: Myeloid differentiation primary response protein MyD88
Authors:Clabbers, M.T.B, Holmes, S, Muusse, T.W, Vajjhala, P, Thygesen, S.J, Malde, A.K, Hunter, D.J.B, Croll, T.I, Flueckiger, L, Nanson, J.D, Rahaman, M.H, Aquila, A, Hunter, M.S, Liang, M, Yoon, C.H, Zhao, J, Zatsepin, N.A, Abbey, B, Sierecki, E, Gambin, Y, Stacey, K.J, Darmanin, C, Kobe, B, Xu, H, Ve, T.
Deposit date:2020-12-24
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography.
Nat Commun, 12, 2021
5JYI
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BU of 5jyi by Molmil
Trypsin bound with succinic acid at 1.9A
Descriptor: CALCIUM ION, Cationic trypsin, SODIUM ION, ...
Authors:Manohar, R, Kutumbarao, N.H.V, KarthiK, L, Malathy, P, Velmurugan, D, Gunasekaran, K.
Deposit date:2016-05-14
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.914 Å)
Cite:Trypsin bound with succinic acid at 1.9A
To Be Published
5LVG
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BU of 5lvg by Molmil
Hen Egg White Lysozyme co-crystallized with cis-Ru(DMSO)4Cl2
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
Authors:Kurpiewska, K, Halajko, P, Lewinski, K.
Deposit date:2016-09-14
Release date:2016-09-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand-dependent interaction of anticancer ruthenium complexes with hen egg white lysozyme and human lysozyme
To Be Published
5GV4
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BU of 5gv4 by Molmil
Y74COX MUTANT OF PLASMODIUM FALCIPARUM TRIOSEPHOSPHATE ISOMERASE
Descriptor: 1,2-ETHANEDIOL, 2-PHOSPHOGLYCOLIC ACID, Triosephosphate isomerase
Authors:Pareek, V, Balaram, P, Murthy, M.R.N.
Deposit date:2016-09-01
Release date:2017-09-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Y74COX MUTANT OF PLASMODIUM FALCIPARUM TRIOSEPHOSPHATE ISOMERASE
To Be Published
5LVI
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BU of 5lvi by Molmil
Hen Egg White Lysozyme co-crystallized with [HIsq][trans-RuCl4(DMSO)(Isq)]
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
Authors:Kurpiewska, K, Halajko, P, Lewinski, K.
Deposit date:2016-09-14
Release date:2016-09-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Ligand-dependent interaction of anticancer ruthenium complexes with hen egg white lysozyme and human lysozyme
To Be Published
4ZZ9
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BU of 4zz9 by Molmil
Crystal structure of T75S mutant of Triosephosphate isomerase from Plasmodium falciparum
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, Triosephosphate isomerase
Authors:Bandyopadhyay, D, Murthy, M.R.N, Balaram, H, Balaram, P.
Deposit date:2015-05-22
Release date:2015-07-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Probing the role of highly conserved residues in triosephosphate isomerase - analysis of site specific mutants at positions 64 and 75 in the Plasmodial enzyme
Febs J., 282, 2015
6H77
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BU of 6h77 by Molmil
E1 enzyme for ubiquitin like protein activation in complex with UBL
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Soudah, N, Padala, P, Hassouna, F, Mashahreh, B, Lebedev, A.A, Isupov, M.N, Cohen-Kfir, E, Wiener, R.
Deposit date:2018-07-30
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An N-Terminal Extension to UBA5 Adenylation Domain Boosts UFM1 Activation: Isoform-Specific Differences in Ubiquitin-like Protein Activation.
J.Mol.Biol., 431, 2019
2HD7
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BU of 2hd7 by Molmil
Solution structure of C-teminal domain of twinfilin-1.
Descriptor: Twinfilin-1
Authors:Hellman, M.H, Paavilainen, V.O, Annila, A, Lappalainen, P, Permi, P.I.
Deposit date:2006-06-20
Release date:2007-02-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis and evolutionary origin of actin filament capping by twinfilin
Proc.Natl.Acad.Sci.Usa, 104, 2007
4X22
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BU of 4x22 by Molmil
Crystal structure of Leptospira Interrogans Triosephosphate Isomerase (LiTIM)
Descriptor: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, Triosephosphate isomerase
Authors:Pareek, V, Balaram, P, Murthy, M.R.N.
Deposit date:2014-11-25
Release date:2016-02-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.084 Å)
Cite:Connecting Active-Site Loop Conformations and Catalysis in Triosephosphate Isomerase: Insights from a Rare Variation at Residue 96 in the Plasmodial Enzyme
Chembiochem, 17, 2016
1YZ2
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BU of 1yz2 by Molmil
Solution structure of Am2766
Descriptor: Delta-conotoxin Am 2766
Authors:Sarma, S.P, Kumar, G.S, Sudarslal, S, Iengar, P, Sikdar, S.K, Krishnan, K.S, Balaram, P.
Deposit date:2005-02-26
Release date:2006-02-07
Last modified:2019-11-06
Method:SOLUTION NMR
Cite:Solution Structure of delta-Am2766: A Highly Hydrophobic delta-Conotoxin from Conus amadis That Inhibits Inactivation of Neuronal Voltage-Gated Sodium Channels
CHEM.BIODIVERS., 2, 2005
4Z0S
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BU of 4z0s by Molmil
F96A Mutant of Plasmodium Falciparum Triosephosphate Isomerase
Descriptor: 1,2-ETHANEDIOL, Triosephosphate isomerase
Authors:Pareek, V, Balaram, P, Murthy, M.R.N.
Deposit date:2015-03-26
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Connecting Active-Site Loop Conformations and Catalysis in Triosephosphate Isomerase: Insights from a Rare Variation at Residue 96 in the Plasmodial Enzyme
Chembiochem, 17, 2016
2VO4
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BU of 2vo4 by Molmil
Glutathione transferase from Glycine max
Descriptor: 2,4-D INDUCIBLE GLUTATHIONE S-TRANSFERASE, 4-NITROPHENYL METHANETHIOL, GLYCEROL, ...
Authors:Axarli, I, Dhavala, P, Papageorgiou, A.C, Labrou, N.E.
Deposit date:2008-02-08
Release date:2008-12-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystallographic and Functional Characterization of the Fluorodifen-Inducible Glutathione Transferase from Glycine Max Reveals an Active Site Topography Suited for Diphenylether Herbicides and a Novel L-Site.
J.Mol.Biol., 385, 2009
4YWI
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BU of 4ywi by Molmil
F96S/L167V Double mutant of Plasmodium Falciparum Triosephosphate Isomerase
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Triosephosphate isomerase
Authors:Pareek, V, Balaram, P, Murthy, M.R.N.
Deposit date:2015-03-20
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Connecting Active-Site Loop Conformations and Catalysis in Triosephosphate Isomerase: Insights from a Rare Variation at Residue 96 in the Plasmodial Enzyme
Chembiochem, 17, 2016
4YXG
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BU of 4yxg by Molmil
F96Y Mutant of Plasmodium Falciparum Triosephosphate Isomerase
Descriptor: 1,2-ETHANEDIOL, Triosephosphate isomerase
Authors:Pareek, V, Balaram, P, Murthy, M.R.N.
Deposit date:2015-03-23
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Connecting Active-Site Loop Conformations and Catalysis in Triosephosphate Isomerase: Insights from a Rare Variation at Residue 96 in the Plasmodial Enzyme
Chembiochem, 17, 2016
3VGN
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BU of 3vgn by Molmil
Crystal Structure of Ketosteroid Isomerase D40N from Pseudomonas putida (pKSI) with bound 3-fluoro-4-nitrophenol
Descriptor: 3-fluoro-4-nitrophenol, Steroid Delta-isomerase
Authors:Caaveiro, J.M.M, Pybus, B, Ringe, D, Petsko, G.A, Sigala, P.A.
Deposit date:2011-08-16
Release date:2012-08-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Quantitative dissection of hydrogen bond-mediated proton transfer in the ketosteroid isomerase active site
Proc.Natl.Acad.Sci.USA, 110, 2013
3FGH
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BU of 3fgh by Molmil
Human mitochondrial transcription factor A box B
Descriptor: CADMIUM ION, CHLORIDE ION, SODIUM ION, ...
Authors:Gangelhoff, T.A, Mungalachetty, P, Nix, J, Churchill, M.E.A.
Deposit date:2008-12-06
Release date:2009-04-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural analysis and DNA binding of the HMG domains of the human mitochondrial transcription factor A
Nucleic Acids Res., 37, 2009
2J8A
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BU of 2j8a by Molmil
X-ray structure of the N-terminus RRM domain of Set1
Descriptor: HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-4 SPECIFIC
Authors:Tresaugues, L, Dehe, P.M, Guerois, R, Rodriguez-Gil, A, Varlet, I, Salah, P, Pamblanco, M, Luciano, P, Quevillon-Cheruel, S, Sollier, J, Leulliot, N, Couprie, J, Tordera, V, Zinn-Justin, S, Chavez, S, Van Tilbeurgh, H, Geli, V.
Deposit date:2006-10-24
Release date:2007-03-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-Ray Structure of the N-Terminus Rrm Domain of Set1
To be Published

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