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PDB: 101 results

7O3N
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BU of 7o3n by Molmil
Crystal Structure of AcrB Single Mutant - 2
Descriptor: DODECYL-BETA-D-MALTOSIDE, Efflux pump membrane transporter
Authors:Ababou, A.
Deposit date:2021-04-02
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.561 Å)
Cite:Crystal Structure of AcrB Single Mutant - 2
To Be Published
7O3M
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Crystal Structure of AcrB Single Mutant - 1
Descriptor: DODECYL-BETA-D-MALTOSIDE, Efflux pump membrane transporter
Authors:Ababou, A.
Deposit date:2021-04-02
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.551 Å)
Cite:Crystal Structure of AcrB Single Mutant - 1
To Be Published
7O3L
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BU of 7o3l by Molmil
Crystal Structure of AcrB Double Mutant
Descriptor: DODECYL-BETA-D-MALTOSIDE, Efflux pump membrane transporter
Authors:Ababou, A.
Deposit date:2021-04-02
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.526 Å)
Cite:Crystal Structure of AcrB Double Mutant
To Be Published
8G8C
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BU of 8g8c by Molmil
Crystal structure of DH1322.1 Fab in complex with HIV proximal MPER peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DH1322.1 heavy chain, DH1322.1 light chain, ...
Authors:Niyongabo, A, Janus, B.M, Ofek, G.
Deposit date:2023-02-17
Release date:2024-05-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Vaccine induction of heterologous HIV-1-neutralizing antibody B cell lineages in humans.
Cell, 187, 2024
8G8D
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BU of 8g8d by Molmil
Crystal structure of DH1346 Fab in complex with HIV proximal MPER peptide
Descriptor: DH1346 heavy chain, DH1346 light chain, FLUORIDE ION, ...
Authors:Niyongabo, A, Janus, B.M, Ofek, G.
Deposit date:2023-02-17
Release date:2024-05-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Vaccine induction of heterologous HIV-1-neutralizing antibody B cell lineages in humans.
Cell, 187, 2024
5O0U
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BU of 5o0u by Molmil
Crystal structure of tarantula venom peptide Protoxin-II
Descriptor: 1,2-ETHANEDIOL, Beta/omega-theraphotoxin-Tp2a, CHLORIDE ION
Authors:Tabor, A, McCarthy, S, Reyes, F.E.
Deposit date:2017-05-17
Release date:2017-09-13
Last modified:2019-03-27
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:The Role of Disulfide Bond Replacements in Analogues of the Tarantula Toxin ProTx-II and Their Effects on Inhibition of the Voltage-Gated Sodium Ion Channel Nav1.7.
J.Am.Chem.Soc., 139, 2017
5JGH
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BU of 5jgh by Molmil
Crystal structure of the mitochondrial DNA packaging protein Abf2p in complex with DNA at 2.6 Angstrom resolution
Descriptor: ACETATE ION, ARS-binding factor 2, mitochondrial, ...
Authors:Chakraborty, A, Lyonnais, S, Sola, M.
Deposit date:2016-04-20
Release date:2017-02-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:DNA structure directs positioning of the mitochondrial genome packaging protein Abf2p.
Nucleic Acids Res., 45, 2017
5JH0
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Crystal structure of the mitochondrial DNA packaging protein Abf2p in complex with DNA at 2.18 Angstrom resolution
Descriptor: ARS-binding factor 2, mitochondrial, DNA (5'-D(*AP*AP*TP*AP*AP*TP*AP*AP*AP*TP*TP*AP*TP*AP*TP*AP*AP*TP*AP*TP*AP*A)-3'), ...
Authors:Chakraborty, A, Lyonnais, S, Sola, M.
Deposit date:2016-04-20
Release date:2017-02-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:DNA structure directs positioning of the mitochondrial genome packaging protein Abf2p.
Nucleic Acids Res., 45, 2017
3KDE
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BU of 3kde by Molmil
Crystal structure of the THAP domain from D. melanogaster P-element transposase in complex with its natural DNA binding site
Descriptor: 5'-D(*(BRU)P*CP*CP*AP*CP*TP*TP*AP*AP*C)-3', 5'-D(*GP*TP*TP*AP*AP*GP*(BRU)P*GP*GP*A)-3', Transposable element P transposase, ...
Authors:Sabogal, A, Lyubimov, A.Y, Berger, J.M, Rio, D.C.
Deposit date:2009-10-22
Release date:2009-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:THAP proteins target specific DNA sites through bipartite recognition of adjacent major and minor grooves.
Nat.Struct.Mol.Biol., 17, 2010
5FUI
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Crystal structure of the C-terminal CBM6 of LamC a marine laminarianse from Zobellia galactanivorans
Descriptor: 2-AMINOMETHYL-PYRIDINE, ENDO-1,3-BETA-GLUCANASE, FAMILY GH16, ...
Authors:Labourel, A, Jam, M, Legentil, L, Sylla, B, Hehemann, J.H, Ficko-Blean, E, Ferrieres, V, Czjzek, M, Michel, G.
Deposit date:2016-01-27
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Unraveling the Multivalent Binding of a Marine Family 6 Carbohydrate-Binding Module with its Native Laminarin Ligand.
FEBS J., 283, 2016
8SBG
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BU of 8sbg by Molmil
Crystal structure of B. theta tryptophanase in holo form
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Tryptophanase
Authors:Graboski, A.L, Redinbo, M.R.
Deposit date:2023-04-03
Release date:2023-08-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Mechanism-based inhibition of gut microbial tryptophanases reduces serum indoxyl sulfate.
Cell Chem Biol, 30, 2023
8SIJ
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BU of 8sij by Molmil
Crystal structure of F. varium tryptophanase
Descriptor: CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE, Tryptophanase 1, ...
Authors:Graboski, A.L, Redinbo, M.R.
Deposit date:2023-04-16
Release date:2023-08-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mechanism-based inhibition of gut microbial tryptophanases reduces serum indoxyl sulfate.
Cell Chem Biol, 30, 2023
8SL7
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Butyricicoccus sp. BIOML-A1 tryptophanase complex with (3S) ALG-05
Descriptor: (E)-3-[(3S)-3-chloro-2-oxo-2,3-dihydro-1H-indol-3-yl]-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-alanine, Tryptophanase
Authors:Graboski, A.L, Redinbo, M.R.
Deposit date:2023-04-21
Release date:2023-08-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Mechanism-based inhibition of gut microbial tryptophanases reduces serum indoxyl sulfate.
Cell Chem Biol, 30, 2023
5DSU
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BU of 5dsu by Molmil
Crystal structure of double mutant of N-domain of human calmodulin
Descriptor: CALCIUM ION, Calmodulin, TRIETHYLENE GLYCOL
Authors:Ababou, A, Zaleska, M.
Deposit date:2015-09-17
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:On the Ca(2+) binding and conformational change in EF-hand domains: Experimental evidence of Ca(2+)-saturated intermediates of N-domain of calmodulin.
Biochim. Biophys. Acta, 1865, 2017
4KQ0
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BU of 4kq0 by Molmil
Crystal structure of double-helical CGG-repetitive RNA 19mer complexed with RSS p19
Descriptor: 5'-R(P*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*C)-3', RNA silencing suppressor p19, SULFATE ION
Authors:Cabo, A, Katorcha, E, Tamjar, J, Popov, A.N, Malinina, L.
Deposit date:2013-05-14
Release date:2014-05-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into CNG-repetitive RNAs associated with human Trinucleotide Repeat Expansion Diseases (TREDs)
To be Published
4EZ2
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BU of 4ez2 by Molmil
Crystal Structure of d(CCGGGACCGG)4 as a four-way junction at 1.6 angstrom resolution
Descriptor: 5'-D(*CP*CP*GP*GP*GP*AP*CP*CP*GP*G)-3', SODIUM ION
Authors:Chakraborty, A, Mandal, P.K, Gautham, N.
Deposit date:2012-05-02
Release date:2012-10-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of d(CCGGGACCGG)(4) as a four-way junction at 1.6 A resolution: new insights into solvent interactions.
Acta Crystallogr.,Sect.F, 68, 2012
4ZJO
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BU of 4zjo by Molmil
Crystal structure of AcrB triple mutant in complex with antibiotic in P21 space group
Descriptor: DODECYL-BETA-D-MALTOSIDE, ERYTHROMYCIN A, Multidrug efflux pump subunit AcrB, ...
Authors:Ababou, A, Koronakis, V.
Deposit date:2015-04-29
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structures of Gate Loop Variants of the AcrB Drug Efflux Pump Bound by Erythromycin Substrate.
Plos One, 11, 2016
4BPZ
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BU of 4bpz by Molmil
Crystal structure of lamA_E269S from Zobellia galactanivorans in complex with a trisaccharide of 1,3-1,4-beta-D-glucan.
Descriptor: CALCIUM ION, ENDO-1,3-BETA-GLUCANASE, FAMILY GH16, ...
Authors:Labourel, A, Jam, M, Jeudy, A, Czjzek, M, Michel, G.
Deposit date:2013-05-29
Release date:2013-12-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:The Beta-Glucanase Zglama from Zobellia Galactanivorans Evolved a Bent Active Site Adapted for Efficient Degradation of Algal Laminarin.
J.Biol.Chem., 289, 2014
4ZJQ
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BU of 4zjq by Molmil
Crystal structure of AcrB deletion mutant in complex with antibiotic in P21 space group
Descriptor: DODECYL-BETA-D-MALTOSIDE, ERYTHROMYCIN A, Multidrug efflux pump subunit AcrB, ...
Authors:Ababou, A, Koronakis, V.
Deposit date:2015-04-29
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.592 Å)
Cite:Structures of Gate Loop Variants of the AcrB Drug Efflux Pump Bound by Erythromycin Substrate.
Plos One, 11, 2016
4ZJL
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BU of 4zjl by Molmil
Crystal structure of AcrB in complex with antibiotic in P21 space group
Descriptor: DODECYL-BETA-D-MALTOSIDE, ERYTHROMYCIN A, Multidrug efflux pump subunit AcrB, ...
Authors:Ababou, A, Koronakis, V.
Deposit date:2015-04-29
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.47 Å)
Cite:Structures of Gate Loop Variants of the AcrB Drug Efflux Pump Bound by Erythromycin Substrate.
Plos One, 11, 2016
4CRQ
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BU of 4crq by Molmil
Crystal structure of the catalytic domain of the modular laminarinase ZgLamC mutant E142S
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Labourel, A, Jam, M, Legentil, L, Sylla, B, Ficko-Blean, E, Hehemann, J.H, Ferrieres, V, Czjzek, M, Michel, G.
Deposit date:2014-02-28
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Biochemical Characterization of the Laminarina Zglamc[Gh16] from Zobellia Galactanivorans Suggests Preferred Recognition of Branched Laminarin
Acta Crystallogr.,Sect.D, 71, 2015
4BOW
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BU of 4bow by Molmil
Crystal structure of LamA_E269S from Z. galactanivorans in complex with laminaritriose and laminaritetraose
Descriptor: CALCIUM ION, ENDO-1,3-BETA-GLUCANASE, FAMILY GH16, ...
Authors:Labourel, A, Jeudy, A, Czjzek, M, Michel, G.
Deposit date:2013-05-22
Release date:2013-12-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The Beta-Glucanase Zglama from Zobellia Galactanivorans Evolved a Bent Active Site Adapted for Efficient Degradation of Algal Laminarin
J.Biol.Chem., 289, 2014
4BQ1
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BU of 4bq1 by Molmil
Crystal structure of of LamAcat from Zobellia galactanivorans
Descriptor: CALCIUM ION, ENDO-1,3-BETA-GLUCANASE, FAMILY GH16, ...
Authors:Labourel, A, Jam, M, Jeudy, A, Michel, G, Czjzek, M.
Deposit date:2013-05-29
Release date:2013-12-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Beta Glucanase Zglama from Zobellia Galactanivorans Evolved a Bent Active Site Adapted for Efficient Degradation of Algal Laminarin
J.Biol.Chem., 289, 2014
4QYJ
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BU of 4qyj by Molmil
Structure of Phenylacetaldehyde Dehydrogenase from Pseudomonas putida S12
Descriptor: Aldehyde dehydrogenase
Authors:Crabo, A.G, Gassner, G.T, Sazinsky, M.H.
Deposit date:2014-07-24
Release date:2015-08-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Structure and biochemistry of phenylacetaldehyde dehydrogenase from the Pseudomonas putida S12 styrene catabolic pathway.
Arch.Biochem.Biophys., 616, 2017
4ZIT
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BU of 4zit by Molmil
Crystal structure of AcrB in P21 space group
Descriptor: DODECYL-BETA-D-MALTOSIDE, Multidrug efflux pump subunit AcrB, NICKEL (II) ION
Authors:Ababou, A, Koronakis, V.
Deposit date:2015-04-28
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.296 Å)
Cite:Structures of Gate Loop Variants of the AcrB Drug Efflux Pump Bound by Erythromycin Substrate.
Plos One, 11, 2016

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