Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1498 件

3ODB
DownloadVisualize
BU of 3odb by Molmil
Haemophilus influenzae ferric binding protein A -Iron Loaded -open Conformation
分子名称: FE (III) ION, Iron-utilization periplasmic protein
著者Khambati, H.K, Moraes, T.F, Singh, J, Shouldice, S.R, Yu, R.H, Schryvers, A.B.
登録日2010-08-11
公開日2010-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献The role of vicinal tyrosine residues in the function of Haemophilus influenzae ferric binding protein A.
Biochem.J., 2010
3GTT
DownloadVisualize
BU of 3gtt by Molmil
Mouse SOD1
分子名称: Superoxide dismutase [Cu-Zn], ZINC ION
著者Seetharaman, S.V, Taylor, A.B, Hart, P.J.
登録日2009-03-28
公開日2010-09-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mouse SOD1 and human/mouse SOD1 chimeras.
Arch.Biochem.Biophys., 503, 2010
3DT3
DownloadVisualize
BU of 3dt3 by Molmil
Human Estrogen receptor alpha LBD with GW368
分子名称: 5-(4-hydroxyphenoxy)-6-(3-hydroxyphenyl)-7-methylnaphthalen-2-ol, Estrogen receptor
著者Williams, S.P, Miller, A.B.
登録日2008-07-14
公開日2008-09-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Synthesis of 3-alkyl naphthalenes as novel estrogen receptor ligands.
Bioorg.Med.Chem.Lett., 18, 2008
3RBZ
DownloadVisualize
BU of 3rbz by Molmil
MthK channel, Ca2+-bound
分子名称: CALCIUM ION, Calcium-gated potassium channel mthK
著者Taylor, A.B, Parfenova, L.V, Rothberg, B.S.
登録日2011-03-30
公開日2011-10-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structures of multiple Ca2+-binding sites in a K+ channel RCK domain
Proc.Natl.Acad.Sci.USA, 2011
3IAD
DownloadVisualize
BU of 3iad by Molmil
Crystal structure of human phosphodiesterase 4D with bound allosteric modulator
分子名称: 1-{4-[(2-fluoro-6-methoxy-3'-nitrobiphenyl-3-yl)methyl]phenyl}urea, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, ...
著者Staker, B.L, Burgin Jr, A.B.
登録日2009-07-13
公開日2010-01-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Design of phosphodiesterase 4D (PDE4D) allosteric modulators for enhancing cognition with improved safety.
Nat.Biotechnol., 28, 2010
3NV0
DownloadVisualize
BU of 3nv0 by Molmil
Crystal structure and mutational analysis of the NXF2/NXT1 heterodimeric complex from caenorhabditis elegans at 1.84 A resolution
分子名称: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, DI(HYDROXYETHYL)ETHER, ...
著者Kerkow, D.E, Carmel, A.B, Williamson, J.R.
登録日2010-07-07
公開日2011-07-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献The structure of the NXF2/NXT1 heterodimeric complex reveals the combined specificity and versatility of the NTF2-like fold.
J.Mol.Biol., 415, 2012
3OD7
DownloadVisualize
BU of 3od7 by Molmil
Haemophilus influenzae ferric binding protein A -Iron Loaded
分子名称: FE (III) ION, Iron-utilization periplasmic protein, PHOSPHATE ION
著者Khambati, H.K, Moraes, T.F, Singh, J, Shouldice, S.R, Yu, R.H, Schryvers, A.B.
登録日2010-08-11
公開日2010-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献The role of vicinal tyrosine residues in the function of Haemophilus influenzae ferric binding protein A.
Biochem.J., 2010
3REV
DownloadVisualize
BU of 3rev by Molmil
Crystal structure of human alloreactive tcr nb20
分子名称: 1,2-ETHANEDIOL, TCR NB20 ALPHA CHAIN, TCR NB20 BETA CHAIN
著者Wood, A, Mohammed, F, Salim, M, Tranter, A, Rickinson, A.B, Moss, P.A.H, Stauss, H.J, Steven, N.M, Willcox, B.E.
登録日2011-04-05
公開日2012-01-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and energetic evidence for highly peptide-specific tumor antigen targeting via allo-MHC restriction.
Proc.Natl.Acad.Sci.USA, 108, 2011
3IOZ
DownloadVisualize
BU of 3ioz by Molmil
SIVmac239 Nef in complex with a TCR zeta polypeptide DP1 (L51-D93)
分子名称: Protein Nef, T-cell surface glycoprotein CD3 zeta chain
著者Kim, W.M, Sigalov, A.B, Stern, L.J.
登録日2009-08-15
公開日2010-02-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.699 Å)
主引用文献Pseudo-merohedral twinning and noncrystallographic symmetry in orthorhombic crystals of SIVmac239 Nef core domain bound to different-length TCRzeta fragments.
Acta Crystallogr.,Sect.D, 66, 2010
3IXS
DownloadVisualize
BU of 3ixs by Molmil
Ring1B C-terminal domain/RYBP C-terminal domain Complex
分子名称: 1,2-ETHANEDIOL, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, E3 ubiquitin-protein ligase RING2, ...
著者Wang, R, Taylor, A.B, Kim, C.A.
登録日2009-09-04
公開日2010-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Polycomb Group Targeting through Different Binding Partners of RING1B C-Terminal Domain.
Structure, 18, 2010
3J5M
DownloadVisualize
BU of 3j5m by Molmil
Cryo-EM structure of the BG505 SOSIP.664 HIV-1 Env trimer with 3 PGV04 Fabs
分子名称: BG505 SOSIP gp120, BG505 SOSIP gp41, PGV04 heavy chain, ...
著者Lyumkis, D, Julien, J.-P, Wilson, I.A, Ward, A.B.
登録日2013-10-26
公開日2013-11-13
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Cryo-EM structure of a fully glycosylated soluble cleaved HIV-1 envelope trimer.
Science, 342, 2013
3REN
DownloadVisualize
BU of 3ren by Molmil
CPF_2247, a novel alpha-amylase from Clostridium perfringens
分子名称: 1,2-ETHANEDIOL, Glycosyl hydrolase, family 8, ...
著者Ficko-Blean, E, Stuart, C.P, Boraston, A.B.
登録日2011-04-04
公開日2011-05-18
最終更新日2013-09-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis of CPF_2247, a novel alpha-amylase from Clostridium perfringens.
Proteins, 79, 2011
3REW
DownloadVisualize
BU of 3rew by Molmil
Crystal structure of an lmp2a-derived peptide bound to human class i mhc hla-a2
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, CHLORIDE ION, ...
著者Wood, A, Mohammed, F, Salim, M, Tranter, A, Rickinson, A.B, Moss, P.A.H, Stauss, H.J, Steven, N.M, Willcox, B.E.
登録日2011-04-05
公開日2012-01-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and energetic evidence for highly peptide-specific tumor antigen targeting via allo-MHC restriction.
Proc.Natl.Acad.Sci.USA, 108, 2011
3SB7
DownloadVisualize
BU of 3sb7 by Molmil
Cu-mediated Trimer of T4 Lysozyme D61H/K65H/R76H/R80H by Synthetic Symmetrization
分子名称: COPPER (II) ION, GLYCEROL, Lysozyme
著者Soriaga, A.B, Laganowsky, A, Zhao, M, Sawaya, M.R, Cascio, D, Yeates, T.O.
登録日2011-06-03
公開日2011-09-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
6MS2
DownloadVisualize
BU of 6ms2 by Molmil
Crystal structure of the GH43 BlXynB protein from Bacillus licheniformis
分子名称: CALCIUM ION, Glycoside Hydrolase Family 43
著者Zanphorlin, L.M, Morais, M.A.B, Diogo, J.A, Murakami, M.T.
登録日2018-10-16
公開日2019-04-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.494 Å)
主引用文献Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43.
Biotechnol. Bioeng., 116, 2019
6PSM
DownloadVisualize
BU of 6psm by Molmil
Crystal structure of PsS1_19B C77S in complex with kappa-neocarrabiose
分子名称: 1,2-ETHANEDIOL, 3,6-anhydro-D-galactose, 4-O-sulfo-beta-D-galactopyranose, ...
著者Hettle, A.G, Boraston, A.B.
登録日2019-07-12
公開日2019-09-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Commun Biol, 2, 2019
6PT9
DownloadVisualize
BU of 6pt9 by Molmil
Crystal structure of PsS1_NC C84S in complex with k-neocarrabiose
分子名称: 1,2-ETHANEDIOL, 3,6-anhydro-D-galactose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Hettle, A.G, Boraston, A.B.
登録日2019-07-15
公開日2019-09-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Commun Biol, 2, 2019
7T6X
DownloadVisualize
BU of 7t6x by Molmil
Cryo-EM structure of full-length hepatitis C virus E1E2 glycoprotein in complex with AR4A, AT12009, and IGH505 Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AR4A Fab, ...
著者Torrents de la Pena, A, Ward, A.B, Eshun-Wilson, L, Lander, G.C.
登録日2021-12-14
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (3.83 Å)
主引用文献Structure of the hepatitis C virus E1E2 glycoprotein complex.
Science, 378, 2022
5VFF
DownloadVisualize
BU of 5vff by Molmil
Synaptotagmin 1 C2B domain, lead-bound (low occupancy)
分子名称: LEAD (II) ION, Synaptotagmin-1
著者Taylor, A.B, Hart, P.J, Igumenova, T.I.
登録日2017-04-07
公開日2018-04-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.413 Å)
主引用文献High affinity interactions of Pb2+with synaptotagmin I.
Metallomics, 10, 2018
1YT7
DownloadVisualize
BU of 1yt7 by Molmil
Cathepsin K complexed with a constrained ketoamide inhibitor
分子名称: (1R)-2,2-DIMETHYL-1-({5-[4-(TRIFLUOROMETHYL)PHENYL]-1,3,4-OXADIAZOL-2-YL}METHYL)PROPYL (1S)-1-{OXO[(2-OXO-1,3-OXAZOLIDIN-3-YL)AMINO]ACETYL}PENTYLCARBAMATE, Cathepsin K, SULFATE ION
著者Barrett, D.G, Boncek, V.M, Catalano, J.G, Deaton, D.N, Hassell, A.M, Jurgensen, C.H, Long, S.T, McFadyen, R.B, Miller, A.B, Miller, L.R, Payne, J.A, Ray, J.A, Samano, V, Shewchuk, L.M, Tavares, F.X, Wells-Knecht, K.J, Willard, D.H, Wright, L.L, Zhou, H.Q.
登録日2005-02-10
公開日2005-07-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献P(2)-P(3) conformationally constrained ketoamide-based inhibitors of cathepsin K.
Bioorg.Med.Chem.Lett., 15, 2005
6PT4
DownloadVisualize
BU of 6pt4 by Molmil
Crystal structure of apo PsS1_NC
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Hettle, A.G, Boraston, A.B.
登録日2019-07-14
公開日2019-09-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Commun Biol, 2, 2019
5VN8
DownloadVisualize
BU of 5vn8 by Molmil
Cryo-EM model of B41 SOSIP.664 in complex with fragment antigen binding variable domain of b12
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
著者Ozorowski, G, Pallesen, J, Ward, A.B, Cottrell, C.A.
登録日2017-04-28
公開日2017-07-12
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Open and closed structures reveal allostery and pliability in the HIV-1 envelope spike.
Nature, 547, 2017
6CS2
DownloadVisualize
BU of 6cs2 by Molmil
SARS Spike Glycoprotein - human ACE2 complex, Stabilized variant, all ACE2-bound particles
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Kirchdoerfer, R.N, Wang, N, Pallesen, J, Turner, H.L, Cottrell, C.A, McLellan, J.S, Ward, A.B.
登録日2018-03-19
公開日2018-04-11
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis.
Sci Rep, 8, 2018
2V5D
DownloadVisualize
BU of 2v5d by Molmil
Structure of a Family 84 Glycoside Hydrolase and a Family 32 Carbohydrate-Binding Module in Tandem from Clostridium perfringens.
分子名称: CALCIUM ION, O-GLCNACASE NAGJ
著者Ficko-Blean, E, Gregg, K.J, Adams, J.J, Hehemann, J.H, Smith, S.J, Czjzek, M, Boraston, A.B.
登録日2008-10-02
公開日2009-01-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Portrait of an Enzyme: A Complete Structural Analysis of a Multi-Modular Beta-N-Acetylglucosaminidase from Clostridium Perfringens
J.Biol.Chem., 284, 2009
2V8I
DownloadVisualize
BU of 2v8i by Molmil
Structure of a Family 2 Pectate Lyase in a Native Form
分子名称: IODIDE ION, PECTATE LYASE
著者Abbott, D.W, Boraston, A.B.
登録日2007-08-08
公開日2007-09-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A Family 2 Pectate Lyase Displays a Rare Fold and Transition Metal-Assisted -Elimination.
J.Biol.Chem., 282, 2007

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon