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PDB: 89472 results

4Z11
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BU of 4z11 by Molmil
Latent aurone synthase (polyphenol oxidase) from natural source
Descriptor: Aurone synthase, COPPER (II) ION
Authors:Molitor, C, Mauracher, S.G, Rompel, A.
Deposit date:2015-03-26
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Aurone synthase is a catechol oxidase with hydroxylase activity and provides insights into the mechanism of plant polyphenol oxidases.
Proc.Natl.Acad.Sci.USA, 113, 2016
4YZ4
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BU of 4yz4 by Molmil
Crystal Structure of Streptococcus pneumoniae NanC, in complex with N-Acetylneuraminic acid.
Descriptor: N-acetyl-alpha-neuraminic acid, SULFATE ION, Sialidase, ...
Authors:Lukacik, P, Owen, C.D, Potter, J.A, Taylor, G.L, Walsh, M.A.
Deposit date:2015-03-24
Release date:2015-09-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Streptococcus pneumoniae NanC: STRUCTURAL INSIGHTS INTO THE SPECIFICITY AND MECHANISM OF A SIALIDASE THAT PRODUCES A SIALIDASE INHIBITOR.
J.Biol.Chem., 290, 2015
8UFJ
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BU of 8ufj by Molmil
Structure of M. mazei GS(R167L-A168G) apo form
Descriptor: Glutamine synthetase, MAGNESIUM ION
Authors:Schumacher, M.A.
Deposit date:2023-10-04
Release date:2023-11-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:M. mazei glutamine synthetase and glutamine synthetase-GlnK1 structures reveal enzyme regulation by oligomer modulation.
Nat Commun, 14, 2023
6TH1
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BU of 6th1 by Molmil
IE1 from rat cytomegalovirus
Descriptor: Immediate early protein 1
Authors:Schweininger, J, Muller, Y.A.
Deposit date:2019-11-18
Release date:2020-11-25
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Cytomegalovirus immediate-early 1 proteins form a structurally distinct protein class with adaptations determining cross-species barriers.
Plos Pathog., 17, 2021
5Z79
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BU of 5z79 by Molmil
Crystal Structure Analysis of the HPPK-DHPS in complex with substrates
Descriptor: 4-AMINOBENZOIC ACID, 5'-DEOXYADENOSINE, 6-HYDROXYMETHYLPTERIN-DIPHOSPHATE, ...
Authors:Manickam, Y, Karl, H, Sharma, A.
Deposit date:2018-01-27
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase-dihydropteroate synthase fromPlasmodium vivaxsheds light on drug resistance
J. Biol. Chem., 293, 2018
6YGX
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BU of 6ygx by Molmil
tRNA-guanine Transglycosylase (TGT) labeled with 5-fluorotryptophan in co-crystallized complex with 6-amino-2-(methylamino)-4-(2-((2R,3R,4S,5R,6S)-3,4,5,6-tetramethoxytetrahydro-2H-pyran-2-yl)ethyl)-1H-imidazo[4,5-g]quinazolin-8(7H)-one
Descriptor: 6-azanyl-2-(methylamino)-4-[2-[(2~{R},3~{R},4~{S},5~{R},6~{S})-3,4,5,6-tetramethoxyoxan-2-yl]ethyl]-1,7-dihydroimidazo[4,5-g]quinazolin-8-one, Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Nguyen, A, Heine, A, Klebe, G.
Deposit date:2020-03-27
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Co-crystallization, nanoESI-MS and 19F NMR reveal dimer disturbing inhibitors and conformational changes at dimer contacts
To Be Published
8AVQ
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BU of 8avq by Molmil
AO75L in Complex with UDP-Xylose
Descriptor: 1,2-ETHANEDIOL, AO75L, BICINE, ...
Authors:Laugeri, M.E, Speciale, I, Gimeno, A, Lin, S, Poveda, A, Lowary, T, Van Etten, J.L, Barbero, J.J, De Castro, C, Tonetti, M, Rojas, A.L.
Deposit date:2022-08-26
Release date:2023-09-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:AO75L in Complex with UDP-Xylose
To Be Published
8V3S
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BU of 8v3s by Molmil
Structure of CCP5 class3
Descriptor: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, ZINC ION, ...
Authors:Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2023-11-28
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Nature, 631, 2024
5KZL
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BU of 5kzl by Molmil
Structure of Heme Oxygenase from Leptospira interrogans
Descriptor: Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Klinke, S, Soldano, A, Otero, L.H, Rivera, M, Catalano-Dupuy, D.L, Ceccarelli, E.A.
Deposit date:2016-07-25
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural and mutational analyses of the Leptospira interrogans virulence-related heme oxygenase provide insights into its catalytic mechanism.
PLoS ONE, 12, 2017
5HPK
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BU of 5hpk by Molmil
System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: NEDD4L and UbV NL.1
Descriptor: E3 ubiquitin-protein ligase NEDD4-like, Ubiquitin variant NL.1
Authors:Wu, K.-P, Mukherjee, M, Mercredi, P.Y, Schulman, B.A.
Deposit date:2016-01-20
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.431 Å)
Cite:System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes.
Mol.Cell, 62, 2016
6FLY
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BU of 6fly by Molmil
Structure of AcmJRL, a mannose binding jacalin related lectin from Ananas comosus, in complex with mannose.
Descriptor: Jacalin-like lectin, alpha-D-mannopyranose
Authors:Azarkan, M, Herman, R, El Mahyaoui, R, Sauvage, E, Vanden Broeck, A, Charlier, P.
Deposit date:2018-01-29
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.749 Å)
Cite:Biochemical and structural characterization of a mannose binding jacalin-related lectin with two-sugar binding sites from pineapple (Ananas comosus) stem.
Sci Rep, 8, 2018
5HT8
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BU of 5ht8 by Molmil
Crystal structure of clostrillin double mutant (S17H,S19H) in complex with nickel
Descriptor: Beta and gamma crystallin, NICKEL (II) ION
Authors:Jamkhindikar, A, Srivastava, S.S, Sankaranarayanan, R.
Deposit date:2016-01-26
Release date:2017-02-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A Transition Metal-Binding, Trimeric beta gamma-Crystallin from Methane-Producing Thermophilic Archaea, Methanosaeta thermophila
Biochemistry, 56, 2017
6G2J
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BU of 6g2j by Molmil
Mouse mitochondrial complex I in the active state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Agip, A.N.A, Blaza, J.N, Bridges, H.R, Viscomi, C, Rawson, S, Muench, S.P, Hirst, J.
Deposit date:2018-03-23
Release date:2018-06-06
Last modified:2021-06-02
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of complex I from mouse heart mitochondria in two biochemically defined states.
Nat. Struct. Mol. Biol., 25, 2018
4Z4A
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BU of 4z4a by Molmil
Avirulence protein 4 (Avr4) from Pseudocercospora fuligena
Descriptor: 1,2-ETHANEDIOL, Carbohydrate-binding module family 14 protein
Authors:Hurlburt, N.K, Kohler, A.C, Fisher, A.J.
Deposit date:2015-04-01
Release date:2016-06-29
Last modified:2016-09-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Analysis of an Avr4 Effector Ortholog Offers Insight into Chitin Binding and Recognition by the Cf-4 Receptor.
Plant Cell, 28, 2016
8V48
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BU of 8v48 by Molmil
CryoEM structure of AriA-AriB complex (Form III)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, AriA antitoxin, AriB
Authors:Deep, A, Corbett, K.D.
Deposit date:2023-11-28
Release date:2024-06-26
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Architecture and activation mechanism of the bacterial PARIS defence system.
Nature, 634, 2024
5HPT
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BU of 5hpt by Molmil
System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: WWP1, Ubv P2.3 and UBCH7
Descriptor: NEDD4-like E3 ubiquitin-protein ligase WWP1, Ubiquitin variant P2.3, Ubiquitin-conjugating enzyme E2 L3
Authors:Wu, K.-P, Schulman, B.A.
Deposit date:2016-01-20
Release date:2016-03-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes.
Mol.Cell, 62, 2016
5J7M
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BU of 5j7m by Molmil
Crystal structure of Cupin 2 conserved barrel domain protein from Kribbella flavida DSM 17836
Descriptor: ACETATE ION, Cupin 2 conserved barrel domain protein, DI(HYDROXYETHYL)ETHER, ...
Authors:Chang, C, Cuff, M, Chhor, G, Endres, M, Joachimiak, A.
Deposit date:2016-04-06
Release date:2016-04-27
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of Cupin 2 conserved barrel domain protein from Kribbella flavida DSM 17836
To Be Published
8UH4
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BU of 8uh4 by Molmil
Cryo-EM structure of Maize Streak Virus (MSV) - single head Geminivirus
Descriptor: Capsid protein, genomic DNA
Authors:Bennett, A.B, McKenna, R, Mietzsch, M, Hull, J.A.
Deposit date:2023-10-06
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:The Two States of MSV Gemini Capsid Assembly
To Be Published
6FN8
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BU of 6fn8 by Molmil
Domain II of the HUMAN COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE at 1.55 A resolution
Descriptor: Copper chaperone for superoxide dismutase, ZINC ION
Authors:Sala, F.A, Wright, G.S.A, Antonyuk, S.V, Garratt, R.C, Hasnain, S.S.
Deposit date:2018-02-02
Release date:2019-01-30
Last modified:2019-06-19
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Molecular recognition and maturation of SOD1 by its evolutionarily destabilised cognate chaperone hCCS.
Plos Biol., 17, 2019
6T4P
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BU of 6t4p by Molmil
Human Carbonic anhydrase II bound by napthalene-1-sulfonamide
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DIMETHYL SULFOXIDE, SODIUM ION, ...
Authors:Smirnov, A, Manakova, E, Grazulis, S.
Deposit date:2019-10-14
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Isoform-Selective Enzyme Inhibitors by Exploring Pocket Size According to the Lock-and-Key Principle.
Biophys.J., 119, 2020
6FNW
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BU of 6fnw by Molmil
Structure of a volume-regulated anion channel of the LRRC8 family
Descriptor: 1,2-ETHANEDIOL, Volume-regulated anion channel subunit LRRC8A
Authors:Deneka, D, Sawicka, M, Lam, A.K.M, Paulino, C, Dutzler, R.
Deposit date:2018-02-05
Release date:2018-05-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a volume-regulated anion channel of the LRRC8 family.
Nature, 558, 2018
4Z51
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BU of 4z51 by Molmil
High Resolution Human Septin 3 GTPase domain
Descriptor: MAGNESIUM ION, Neuronal-specific septin-3, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Valadares, N.F, Macedo, J.N, Leonardo, D.A, Brandao-Neto, J, Pereira, H.M, Matos, S.O, Araujo, A.P.U, Garratt, R.C.
Deposit date:2015-04-02
Release date:2016-04-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:A complete compendium of crystal structures for the human SEPT3 subgroup reveals functional plasticity at a specific septin interface
Iucrj, 2020
8V3R
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BU of 8v3r by Molmil
Structure of CCP5 class2
Descriptor: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, ZINC ION, ...
Authors:Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2023-11-28
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Nature, 631, 2024
8V3Q
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BU of 8v3q by Molmil
Structure of CCP5 class1
Descriptor: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, ZINC ION, ...
Authors:Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2023-11-28
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Nature, 631, 2024
4ROD
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BU of 4rod by Molmil
Human TFIIB-related factor 2 (Brf2) and TBP bound to TRNAU1 promoter
Descriptor: Non-template strand, TATA-box-binding protein, Template strand, ...
Authors:Vannini, A, Gouge, J, Satia, K, Guthertz, N.
Deposit date:2014-10-28
Release date:2015-12-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Redox Signaling by the RNA Polymerase III TFIIB-Related Factor Brf2.
Cell(Cambridge,Mass.), 163, 2015

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PDB entries from 2024-10-16

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