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PDB: 89832 results

7U2Z
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BU of 7u2z by Molmil
Crystal structure of human GSK3B in complex with G12
Descriptor: (3R)-1-[3-(2-fluorophenyl)propanoyl]-N-(pyridin-2-yl)pyrrolidine-3-carboxamide, CHLORIDE ION, Glycogen synthase kinase-3 beta
Authors:Tripathi, S.K, Balboni, B, Giabbai, B, Storici, P, Girotto, S, Cavalli, A.
Deposit date:2022-02-25
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Identification of Novel GSK-3 beta Hits Using Competitive Biophysical Assays.
Int J Mol Sci, 23, 2022
8B9U
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BU of 8b9u by Molmil
Structure of ClpC1 NTD from Mycobacterium tuberculosis
Descriptor: (MLE)V(MAA)(E9M)G, ATP-dependent Clp protease ATP-binding subunit ClpC1, FORMIC ACID
Authors:Meinhart, A, Hoi, D.M, Clausen, T.
Deposit date:2022-10-10
Release date:2023-07-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Clp-targeting BacPROTACs impair mycobacterial proteostasis and survival.
Cell, 186, 2023
6ZD8
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BU of 6zd8 by Molmil
Crystal structure of YTHDC1 T379V mutant
Descriptor: SULFATE ION, YTHDC1
Authors:Bedi, R.K, Li, Y, Caflisch, A.
Deposit date:2020-06-14
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomistic and Thermodynamic Analysis of N6-Methyladenosine (m 6 A) Recognition by the Reader Domain of YTHDC1.
J Chem Theory Comput, 17, 2021
5MGM
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BU of 5mgm by Molmil
Crystal Structure of BAZ2A bromodomain in complex with acetophenone derivative 4
Descriptor: 1-(3-pyrimidin-2-yloxyphenyl)ethanone, Bromodomain adjacent to zinc finger domain protein 2A
Authors:Lolli, G, Spiliotopoulos, D, Caflisch, A.
Deposit date:2016-11-21
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of BAZ2A bromodomain ligands.
Eur J Med Chem, 139, 2017
7U33
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BU of 7u33 by Molmil
Crystal structure of human GSK3B in complex with ARN9133
Descriptor: 3-[2-amino-5-(4-fluorophenyl)pyrimidin-4-yl]-N,N-dimethylazetidine-1-sulfonamide, CHLORIDE ION, Glycogen synthase kinase-3 beta
Authors:Tripathi, S.K, Balboni, B, Giabbai, B, Storici, P, Girotto, S, Cavalli, A.
Deposit date:2022-02-25
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of Novel GSK-3 beta Hits Using Competitive Biophysical Assays.
Int J Mol Sci, 23, 2022
7RUC
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BU of 7ruc by Molmil
Metazoan pre-targeting GET complex with SGTA (cBUGGS)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATPase GET3, Golgi to ER traffic protein 4 homolog, ...
Authors:Keszei, A.F.A, Yip, M.C.J, Shao, S.
Deposit date:2021-08-16
Release date:2021-12-15
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insights into metazoan pretargeting GET complexes.
Nat.Struct.Mol.Biol., 28, 2021
6YNO
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BU of 6yno by Molmil
Crystal structure of YTHDC1 with compound DHU_DC1_139
Descriptor: 6-[[methyl-[(1-phenylpyrazol-3-yl)methyl]amino]methyl]-1~{H}-pyrimidine-2,4-dione, SULFATE ION, YTHDC1
Authors:Bedi, R.K, Huang, D, Wiedmer, L, Caflisch, A.
Deposit date:2020-04-14
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Atomistic and Thermodynamic Analysis of N6-Methyladenosine (m 6 A) Recognition by the Reader Domain of YTHDC1.
J Chem Theory Comput, 17, 2021
6SEK
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BU of 6sek by Molmil
Crystal Structure of Ancestral Flavin-containing monooxygenase (FMO) 5
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Ancestral Flavin-containing monooxygenase 5, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Nicoll, C, Bailleul, G, Fiorentini, F, Mascotti, M.L, Fraaije, M, Mattevi, A.
Deposit date:2019-07-30
Release date:2019-12-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Ancestral-sequence reconstruction unveils the structural basis of function in mammalian FMOs.
Nat.Struct.Mol.Biol., 27, 2020
8G1T
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BU of 8g1t by Molmil
Crystal structure of Bax core domain BH3-groove dimer - tetrameric fraction P21
Descriptor: 1,2-ETHANEDIOL, Apoptosis regulator BAX
Authors:Cowan, A.D, Colman, P.M, Czabotar, P.E, Miller, M.S.
Deposit date:2023-02-02
Release date:2023-12-27
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:Sequence differences between BAX and BAK core domains manifest as differences in their interactions with lipids.
Febs J., 291, 2024
7RU9
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BU of 7ru9 by Molmil
Metazoan pre-targeting GET complex (cBUGG-in)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATPase GET3, Golgi to ER traffic protein 4 homolog, ...
Authors:Keszei, A.F.A, Yip, M.C.J, Shao, S.
Deposit date:2021-08-16
Release date:2021-12-15
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into metazoan pretargeting GET complexes.
Nat.Struct.Mol.Biol., 28, 2021
7SF6
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BU of 7sf6 by Molmil
Crystal Structure of Siderophore Binding Protein FatB from Desulfitobacterium hafniense
Descriptor: 1,2-ETHANEDIOL, 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, CHLORIDE ION, ...
Authors:Kim, Y, Patel, H.P, Nordquist, K.A, Schaab, K.M, Sha, J, Babnigg, G, Bond, A.H, Joachimiak, A, Midwest Center for Structural Genomics, Midwest Center for Structural Genomics (MCSG)
Deposit date:2021-10-03
Release date:2021-12-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Crystal Structure of Siderophore Binding Protein FatB from Desulfitobacterium hafniense
To Be Published
7TSJ
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BU of 7tsj by Molmil
Xenon-bound structure of carbon monoxide dehydrogenase (CODH) from Desulfovibrio vulgaris
Descriptor: Carbon monoxide dehydrogenase, FE2/S2 (INORGANIC) CLUSTER, Fe(4)-Ni(1)-S(4) cluster, ...
Authors:Biester, A, Drennan, C.L.
Deposit date:2022-01-31
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Visualizing the gas channel of a monofunctional carbon monoxide dehydrogenase.
J.Inorg.Biochem., 230, 2022
7B4O
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BU of 7b4o by Molmil
A Bacteroidetes bacterium CuZn-superoxide dismutase with ZnZn metalation
Descriptor: Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Wright, G.S.A.
Deposit date:2020-12-02
Release date:2021-06-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Bacterial Evolutionary Precursors of Eukaryotic Copper-Zinc Superoxide Dismutases.
Mol.Biol.Evol., 38, 2021
2C9H
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BU of 2c9h by Molmil
Structure of mitochondrial beta-ketoacyl synthase
Descriptor: MITOCHONDRIAL BETA-KETOACYL SYNTHASE, NICKEL (II) ION
Authors:Bunkoczi, G, Wu, X, Smee, C, Gileadi, O, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, von Delft, F, Oppermann, U.
Deposit date:2005-12-12
Release date:2005-12-13
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Mitochondrial Beta-Ketoacyl Synthase
To be Published
3M0Z
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BU of 3m0z by Molmil
Crystal structure of putative aldolase from Klebsiella pneumoniae.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, SULFATE ION, ...
Authors:Chang, C, Rakowski, E, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-03-03
Release date:2010-03-31
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of putative aldolase from Klebsiella pneumoniae.
To be Published
7B4P
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BU of 7b4p by Molmil
A Bacteroidetes bacterium CuZn-superoxide dismutase with CuZn metalation
Descriptor: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Wright, G.S.A.
Deposit date:2020-12-02
Release date:2021-06-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Bacterial Evolutionary Precursors of Eukaryotic Copper-Zinc Superoxide Dismutases.
Mol.Biol.Evol., 38, 2021
8QOD
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BU of 8qod by Molmil
CRYSTAL STRUCTURE OF FVIIA IN COMPLEX WITH A BENZAMIDINE-BASED INHIBITOR
Descriptor: 3-[2-bromanyl-4-[(1~{S})-1-[[3-[(4-carbamimidoylphenyl)amino]-3-oxidanylidene-propanoyl]amino]ethyl]phenoxy]benzoic acid, CALCIUM ION, CHLORIDE ION, ...
Authors:Schreuder, H.A, Liesum, A.
Deposit date:2023-09-28
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.573 Å)
Cite:Crystallography and molecular simulations capture S1 pocket collapse in allosteric regulation of factor VIIa and other serine proteases.
To be published
8EAT
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BU of 8eat by Molmil
Yeast VO missing subunits a, e, and f in complex with Vma12-22p
Descriptor: V-type proton ATPase subunit F, V-type proton ATPase subunit c, V-type proton ATPase subunit c', ...
Authors:Wang, H, Bueler, S.A, Rubinstein, J.L.
Deposit date:2022-08-29
Release date:2022-11-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of V-ATPase V O region assembly by Vma12p, 21p, and 22p.
Proc.Natl.Acad.Sci.USA, 120, 2023
7MWI
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BU of 7mwi by Molmil
Crystal structure of human BAZ2A
Descriptor: Bromodomain adjacent to zinc finger domain protein 2A, UNKNOWN ATOM OR ION
Authors:Liu, K, Dong, A, Li, Y, Loppnau, P, Edwards, A.M, Arrowsmith, C.H, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2021-05-17
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of the TAM domain of BAZ2A in binding to DNA or RNA independent of methylation status.
J.Biol.Chem., 297, 2021
8UM5
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BU of 8um5 by Molmil
X-ray structure of human SHIP1 Ptase-C2 domains covalently bound to TREAT-AD (TAD) compound TAD-58547
Descriptor: 5-(1,4-oxazepan-4-yl)-6-propanoylpyridine-2-carbonitrile, DIMETHYL SULFOXIDE, Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1
Authors:Mesecar, A.D, Hamdani, A.K.
Deposit date:2023-10-17
Release date:2024-10-23
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:X-ray structure of human SHIP1 Ptase-C2 domains covalently bound to TREAT-AD (TAD) compound TAD-58547
To Be Published
7N87
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BU of 7n87 by Molmil
Solution NMR structure of peptidase domain from Clostridium thermocellum PCAT1
Descriptor: ABC-type bacteriocin transporter
Authors:Bhattacharya, S, Palillo, A.
Deposit date:2021-06-13
Release date:2021-12-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and dynamic studies of the peptidase domain from Clostridium thermocellum PCAT1.
Protein Sci., 31, 2022
5A23
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BU of 5a23 by Molmil
SdsA sulfatase triclinic form
Descriptor: SDS HYDROLASE SDSA1, ZINC ION
Authors:De la Mora, E, Flores-Hernandez, E, Jakoncik, J, Stojanoff, V, Sanchez-Puig, N, Moreno, A.
Deposit date:2015-05-11
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Sdsa Polymorph Isolation and Improvement of Their Crystal Quality Using Nonconventional Crystallization Techniques
J.Appl.Crystallogr., 48, 2015
3M48
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BU of 3m48 by Molmil
GCN4 Leucine Zipper Peptide Mutant
Descriptor: General control protein GCN4, SODIUM ION
Authors:Du, S, Kettering, R.D, Alvarado, J.J, Tortajada, A, Yeh, J.I.
Deposit date:2010-03-10
Release date:2011-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:GCN4 Leucine Zipper Peptide Mutant
To be Published
6YNR
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BU of 6ynr by Molmil
Crystal structure of the cAMP-dependent protein kinase A in complex with 1,7-Naphthyridin-8-amine (soaked) and PKI (5-24)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,7-naphthyridin-8-amine, DIMETHYL SULFOXIDE, ...
Authors:Oebbeke, M, Heine, A, Klebe, G.
Deposit date:2020-04-14
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Two Methods, One Goal: Structural Differences between Cocrystallization and Crystal Soaking to Discover Ligand Binding Poses.
Chemmedchem, 16, 2021
5A7Z
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BU of 5a7z by Molmil
Crystal structure of Sulfolobus acidocaldarius Trm10 at 2.1 angstrom resolution.
Descriptor: TRNA (ADENINE(9)-N1)-METHYLTRANSFERASE
Authors:Van Laer, B, Roovers, M, Wauters, L, Kasprzak, J, Dyzma, M, Deyaert, E, Feller, A, Bujnicki, J, Droogmans, L, Versees, W.
Deposit date:2015-07-10
Release date:2016-01-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Functional Insights Into tRNA Binding and Adenosine N1-Methylation by an Archaeal Trm10 Homologue.
Nucleic Acids Res., 44, 2016

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PDB entries from 2024-11-13

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