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PDB: 89307 results

3B34
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BU of 3b34 by Molmil
Crystal structure of E. coli Aminopeptidase N in complex with Phenylalanine
Descriptor: Aminopeptidase N, GLYCEROL, MALONATE ION, ...
Authors:Addlagatta, A.
Deposit date:2007-10-19
Release date:2008-05-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural basis for the unusual specificity of Escherichia coli aminopeptidase N.
Biochemistry, 47, 2008
3SO8
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BU of 3so8 by Molmil
Crystal Structure of ANKRA
Descriptor: Ankyrin repeat family A protein 2
Authors:Xu, C, Bochkarev, A, Bian, C.B, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2011-06-30
Release date:2011-10-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Sequence-Specific Recognition of a PxLPxI/L Motif by an Ankyrin Repeat Tumbler Lock.
Sci.Signal., 5, 2012
3SOC
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BU of 3soc by Molmil
Crystal structure of Activin receptor type-IIA (ACVR2A) kinase domain in complex with a quinazolin
Descriptor: 1,2-ETHANEDIOL, Activin receptor type-2A, [4-({4-[(5-CYCLOPROPYL-1H-PYRAZOL-3-YL)AMINO]QUINAZOLIN-2-YL}IMINO)CYCLOHEXA-2,5-DIEN-1-YL]ACETONITRILE
Authors:Chaikuad, A, Williams, E, Mahajan, P, Cooper, C.D.O, Sanvitale, C, Vollmar, M, Muniz, J.R.C, Yue, W.W, von Delft, F, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A, Structural Genomics Consortium (SGC)
Deposit date:2011-06-30
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Activin receptor type-IIA (ACVR2A) kinase domain in complex with a quinazolin
To be Published
4DOT
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BU of 4dot by Molmil
Crystal structure of human HRASLS3.
Descriptor: Group XVI phospholipase A2
Authors:Kiser, P.D, Golczak, M, Sears, A.E, Lodowski, D.T, Palczewski, K.
Deposit date:2012-02-10
Release date:2012-05-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural Basis for the Acyltransferase Activity of Lecithin:Retinol Acyltransferase-like Proteins.
J.Biol.Chem., 287, 2012
3B0P
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BU of 3b0p by Molmil
tRNA-dihydrouridine synthase from Thermus thermophilus
Descriptor: FLAVIN MONONUCLEOTIDE, tRNA-dihydrouridine synthase
Authors:Yu, F, Tanaka, Y, Yamashita, K, Nakamura, A, Yao, M, Tanaka, I.
Deposit date:2011-06-12
Release date:2011-12-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular basis of dihydrouridine formation on tRNA
Proc.Natl.Acad.Sci.USA, 108, 2011
3SBQ
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BU of 3sbq by Molmil
Pseudomonas stutzeri nitrous oxide reductase, P65 crystal form
Descriptor: CALCIUM ION, CHLORIDE ION, DINUCLEAR COPPER ION, ...
Authors:Pomowski, A, Zumft, W.G, Kroneck, P.M.H, Einsle, O.
Deposit date:2011-06-06
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:N2O binding at a [4Cu:2S] copper-sulphur cluster in nitrous oxide reductase.
Nature, 477, 2011
4LR7
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BU of 4lr7 by Molmil
Phosphopentomutase S154A variant
Descriptor: GLYCEROL, MANGANESE (II) ION, Phosphopentomutase
Authors:Birmingham, W.A, Starbird, C.A, Panosian, T.D, Nannemann, D.P, Iverson, T.M, Bachmann, B.O.
Deposit date:2013-07-19
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Bioretrosynthetic construction of a didanosine biosynthetic pathway.
Nat.Chem.Biol., 10, 2014
3B9A
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BU of 3b9a by Molmil
Crystal structure of Vibrio harveyi chitinase A complexed with hexasaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A
Authors:Songsiriritthigul, C, Pantoom, S, Aguda, A.H, Robinson, R.C, Suginta, W.
Deposit date:2007-11-03
Release date:2008-04-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of Vibrio harveyi chitinase A complexed with chitooligosaccharides: implications for the catalytic mechanism
J.Struct.Biol., 162, 2008
8DYN
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BU of 8dyn by Molmil
Antimicrobial lasso peptide cloacaenodin
Descriptor: Cloacaenodin
Authors:Carson, D.V, Link, A.J.
Deposit date:2022-08-04
Release date:2022-12-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cloacaenodin, an Antimicrobial Lasso Peptide with Activity against Enterobacter .
Acs Infect Dis., 9, 2023
2PFN
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BU of 2pfn by Molmil
Na in the active site of DNA Polymerase lambda
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DNA polymerase lambda, Downstream Primer, ...
Authors:Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Pedersen, L.C, Kunkel, T.A.
Deposit date:2007-04-05
Release date:2007-05-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Role of the catalytic metal during polymerization by DNA polymerase lambda.
DNA Repair, 6, 2007
4DZR
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BU of 4dzr by Molmil
The crystal structure of protein-(glutamine-N5) methyltransferase (release factor-specific) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Descriptor: ACETATE ION, CALCIUM ION, GLYCEROL, ...
Authors:Tan, K, Chhor, G, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-03-01
Release date:2012-03-14
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:The crystal structure of protein-(glutamine-N5) methyltransferase (release factor-specific) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
To be Published
3B78
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BU of 3b78 by Molmil
Structure of the eEF2-ExoA(R551H)-NAD+ complex
Descriptor: Elongation factor 2, Exotoxin A, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Jorgensen, R, Merrill, A.R.
Deposit date:2007-10-30
Release date:2008-06-17
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The nature and character of the transition state for the ADP-ribosyltransferase reaction.
Embo Rep., 9, 2008
8DQG
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BU of 8dqg by Molmil
Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (RS1) bound to AMPPNP and acridone
Descriptor: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, DI(HYDROXYETHYL)ETHER, ...
Authors:Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B.
Deposit date:2022-07-19
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity.
Acs Chem.Biol., 17, 2022
4LVA
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BU of 4lva by Molmil
Fragment-based Identification of Amides Derived From trans-2-(Pyridin-3-yl)cyclopropanecarboxylic Acid as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)
Descriptor: 1,2-ETHANEDIOL, N-(4-{[4-(pyrrolidin-1-yl)piperidin-1-yl]sulfonyl}benzyl)-2H-pyrido[4,3-e][1,2,4]thiadiazin-3-amine 1,1-dioxide, Nicotinamide phosphoribosyltransferase, ...
Authors:Giannetti, A.M, Zheng, X, Skelton, N, Wang, W, Bravo, B, Feng, Y, Gunzner-Toste, J, Ho, Y, Hua, R, Wang, C, Zhao, Q, Liederer, B.M, Liu, Y, O'Brien, T, Oeh, J, Sampath, D, Shen, Y, Wang, L, Wu, H, Xiao, Y, Yuen, P, Zak, M, Zhao, G, Dragovich, P.S.
Deposit date:2013-07-26
Release date:2013-09-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Identification of amides derived from 1H-pyrazolo[3,4-b]pyridine-5-carboxylic acid as potent inhibitors of human nicotinamide phosphoribosyltransferase (NAMPT).
Bioorg.Med.Chem.Lett., 23, 2013
8E3U
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BU of 8e3u by Molmil
Nickel-reconstituted nitrogenase MoFeP mutant S188A from Azotobacter vinelandii after IDS oxidation
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(7)-S(7) CLUSTER, ...
Authors:Rutledge, H.L, Tezcan, F.A.
Deposit date:2022-08-17
Release date:2022-12-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Role of Serine Coordination in the Structural and Functional Protection of the Nitrogenase P-Cluster.
J.Am.Chem.Soc., 144, 2022
3BAE
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BU of 3bae by Molmil
Crystal structure of Fab WO2 bound to the N terminal domain of Amyloid beta peptide (1-28)
Descriptor: Amyloid Beta Peptide, WO2 IgG2a Fab fragment Heavy Chain, WO2 IgG2a Fab fragment Light Chain Kappa
Authors:Miles, L.A, Wun, K.S, Crespi, G.A, Parker, M.W.
Deposit date:2007-11-07
Release date:2008-04-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.593 Å)
Cite:Amyloid-beta-anti-amyloid-beta complex structure reveals an extended conformation in the immunodominant B-cell epitope.
J.Mol.Biol., 377, 2008
4M4D
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BU of 4m4d by Molmil
Crystal structure of lipopolysaccharide binding protein
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipopolysaccharide-binding protein
Authors:Eckert, J.K, Kim, Y.J, Kim, J.I, Gurtler, K, Oh, D.Y, Ploeg, A.H, Pickkers, P, Lundvall, L, Hamann, L, Giamarellos-Bourboulis, E, Kubarenko, A.V, Weber, A.N, Kabesch, M, Kumpf, O, An, H.J, Lee, J.O, Schumann, R.R.
Deposit date:2013-08-07
Release date:2013-10-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.909 Å)
Cite:The crystal structure of lipopolysaccharide binding protein reveals the location of a frequent mutation that impairs innate immunity.
Immunity, 39, 2013
7RR0
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BU of 7rr0 by Molmil
SARS-CoV-2 receptor binding domain bound to Fab PDI 222
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PDI 222 Fab Heavy Chain, PDI 222 Fab Light Chain, ...
Authors:Pymm, P, Glukhova, A, Black, K.A, Tham, W.H.
Deposit date:2021-08-08
Release date:2021-10-06
Last modified:2021-10-27
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain.
Cell Rep, 37, 2021
3BHB
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BU of 3bhb by Molmil
Crystal Structure of KMD Phosphopeptide Bound to Human Class I MHC HLA-A2
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Mohammed, F, Cobbold, M, Zarling, A.L, Salim, M, Barrett-Wilt, G.A, Shabanowitz, J, Hunt, D.F, Engelhard, V.H, Willcox, B.E.
Deposit date:2007-11-28
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Phosphorylation-dependent interaction between antigenic peptides and MHC class I: a molecular basis for the presentation of transformed self
Nat.Immunol., 9, 2008
8DQI
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BU of 8dqi by Molmil
Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (RS1) bound to ATP and acridone after 2- weeks of crystal growth
Descriptor: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B.
Deposit date:2022-07-19
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity.
Acs Chem.Biol., 17, 2022
3BIN
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BU of 3bin by Molmil
Structure of the DAL-1 and TSLC1 (372-383) complex
Descriptor: Band 4.1-like protein 3, Cell adhesion molecule 1
Authors:Busam, R.D, Arrowsmith, C.H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Berglund, H, Persson, C, Hallberg, B.M.
Deposit date:2007-11-30
Release date:2008-01-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of tumor suppressor in lung cancer 1 (TSLC1) binding to differentially expressed in adenocarcinoma of the lung (DAL-1/4.1B)
J.Biol.Chem., 286, 2011
8DQH
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BU of 8dqh by Molmil
Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (RS1) bound to ATP and acridone after 24 hours of crystal growth
Descriptor: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B.
Deposit date:2022-07-19
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity.
Acs Chem.Biol., 17, 2022
3SFP
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BU of 3sfp by Molmil
Crystal Structure of the Mono-Zinc-boundform of New Delhi Metallo-beta-Lactamase-1 from Klebsiella pneumoniae
Descriptor: Beta-lactamase NDM-1, CHLORIDE ION, CITRIC ACID, ...
Authors:Kim, Y, Tesar, C, Jedrzejczak, R, Babnigg, J, Binkowski, T.A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2011-06-13
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure of Apo- and Monometalated Forms of NDM-1 A Highly Potent Carbapenem-Hydrolyzing Metallo-beta-Lactamase
Plos One, 6, 2011
3BDB
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BU of 3bdb by Molmil
Crystal Structure of Novel Immune-Type Receptor 11 Extracellular Fragment from Ictalurus punctatus including Stalk Region
Descriptor: Novel immune-type receptor 11
Authors:Ostrov, D.A, Hernandez Prada, J.A, Haire, R.N, Cannon, J.P, Magis, A.T, Bailey, K.M, Litman, G.W.
Deposit date:2007-11-14
Release date:2008-06-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A bony fish immunological receptor of the NITR multigene family mediates allogeneic recognition.
Immunity, 29, 2008
8E3T
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BU of 8e3t by Molmil
Gallium-reconstituted nitrogenase MoFeP mutant S188A from Azotobacter vinelandii after IDS oxidation
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(7)-S(7) CLUSTER, ...
Authors:Rutledge, H.L, Tezcan, F.A.
Deposit date:2022-08-17
Release date:2022-12-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Role of Serine Coordination in the Structural and Functional Protection of the Nitrogenase P-Cluster.
J.Am.Chem.Soc., 144, 2022

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