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PDB: 89472 results

3U9A
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BU of 3u9a by Molmil
Human Thrombin In Complex With MI330
Descriptor: (2S)-N-[[2-(aminomethyl)-5-chloranyl-phenyl]methyl]-1-[(2S)-2-[(3-chloranyl-4-methoxy-phenyl)sulfonylamino]-4-[(4-cyanophenyl)methylamino]-4-oxidanylidene-butanoyl]pyrrolidine-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Biela, A, Heine, A, Klebe, G.
Deposit date:2011-10-18
Release date:2012-10-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Thrombin Inhibition
To be Published
5HM5
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BU of 5hm5 by Molmil
Crystal structure of Topo-97, an N-terminal 97kDa fragment of topoisomerase V
Descriptor: Topoisomerase V
Authors:Rajan, R, Osterman, A, Mondragon, A.
Deposit date:2016-01-15
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Methanopyrus kandleri topoisomerase V contains three distinct AP lyase active sites in addition to the topoisomerase active site.
Nucleic Acids Res., 44, 2016
7EDC
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BU of 7edc by Molmil
Crystal structure of mutant tRNA [Gm18] methyltransferase TrmH (E107G) in complex with S-adenosyl-L-methionine from Escherichia coli
Descriptor: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (guanosine(18)-2'-O)-methyltransferase
Authors:Kono, Y, Ito, A, Okamoto, A, Yamagami, R, Hirata, A, Hori, H.
Deposit date:2021-03-15
Release date:2022-03-23
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.946 Å)
Cite:Unique substrate specificity of type II tRNA Gm18 methyltransferase from Escherichia coli
To Be Published
3NFY
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BU of 3nfy by Molmil
The Structure of Human Bisphosphoglycerate Mutase to 1.94A
Descriptor: Bisphosphoglycerate mutase
Authors:Patterson, A.F, Price, N.C, Nairn, J.
Deposit date:2010-06-10
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Unliganded structure of human bisphosphoglycerate mutase reveals side-chain movements induced by ligand binding.
Acta Crystallogr.,Sect.F, 66, 2010
4F11
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BU of 4f11 by Molmil
Crystal structure of the extracellular domain of human GABA(B) receptor GBR2
Descriptor: Gamma-aminobutyric acid type B receptor subunit 2
Authors:Geng, Y, Xiong, D, Mosyak, L, Malito, D.L, Kniazeff, J, Chen, Y, Burmakina, S, Quick, M, Bush, M, Javitch, J.A, Pin, J.-P, Fan, Q.R.
Deposit date:2012-05-05
Release date:2012-06-06
Last modified:2012-08-15
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structure and functional interaction of the extracellular domain of human GABA(B) receptor GBR2.
Nat.Neurosci., 15, 2012
5H6T
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BU of 5h6t by Molmil
Crystal structure of Hydrazidase from Microbacterium sp. strain HM58-2
Descriptor: Amidase
Authors:Akiyama, T, Ishii, M, Takuwa, A, Oinuma, K, Sasaki, Y, Takaya, N, Yajima, S.
Deposit date:2016-11-15
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of the substrate recognition of hydrazidase isolated from Microbacterium sp. strain HM58-2, which catalyzes acylhydrazide compounds as its sole carbon source
Biochem. Biophys. Res. Commun., 482, 2017
5E0N
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BU of 5e0n by Molmil
Crystal Structure of MSMEG_3139, a monofunctional enoyl CoA isomerase from M.smegmatis
Descriptor: Enoyl-CoA hydratase/isomerase
Authors:Priyadarshan, K, Haque, A.S, Anandakrishnan, M, Sankaranarayanan, R.
Deposit date:2015-09-29
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.061 Å)
Cite:Unsaturated Lipid Assimilation by Mycobacteria Requires Auxiliary cis-trans Enoyl CoA Isomerase.
Chem.Biol., 22, 2015
2F1N
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BU of 2f1n by Molmil
Structure of CdtB, the biologically active subunit of Cytolethal Distending Toxin
Descriptor: Cytolethal distending toxin subunit B
Authors:Hontz, J.S, Yoder, M.D, Dreyfus, L.A.
Deposit date:2005-11-14
Release date:2006-07-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Differences in Crystal and Solution Structures of the Cytolethal Distending Toxin B Subunit: RELEVANCE TO NUCLEAR TRANSLOCATION AND FUNCTIONAL ACTIVATION.
J.Biol.Chem., 281, 2006
2Y8A
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BU of 2y8a by Molmil
VIM-7 with Oxidised. Structural and computational investigations of VIM-7: Insights into the substrate specificity of VIM metallo-beta- lactamases
Descriptor: MAGNESIUM ION, METALLO-B-LACTAMASE, UNKNOWN ATOM OR ION, ...
Authors:Saradhi, P, Leiros, H.-K.S, Ahmad, R, Spencer, J, Leiros, I, Walsh, T.R, Sundsfjord, A, Samuelsen, O.
Deposit date:2011-02-03
Release date:2011-06-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural and Computational Investigations of Vim- 7: Insights Into the Substrate Specificity of Vim Metallo-Beta-Lactamases
J.Mol.Biol., 411, 2011
4E09
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BU of 4e09 by Molmil
Structure of ParF-AMPPCP, I422 form
Descriptor: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Plasmid partitioning protein ParF, SULFATE ION
Authors:Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
Deposit date:2012-03-02
Release date:2012-06-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
4JKR
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BU of 4jkr by Molmil
Crystal Structure of E. coli RNA Polymerase in complex with ppGpp
Descriptor: DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA', DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Zuo, Y, Wang, Y, Steitz, T.A.
Deposit date:2013-03-11
Release date:2013-05-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:The mechanism of E. coli RNA polymerase regulation by ppGpp is suggested by the structure of their complex.
Mol.Cell, 50, 2013
4HXI
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BU of 4hxi by Molmil
Crystal structure of KLHL3/Cul3 complex
Descriptor: Cullin-3, Kelch-like protein 3
Authors:Ji, A.X, Prive, G.G.
Deposit date:2012-11-10
Release date:2013-03-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.513 Å)
Cite:Crystal structure of KLHL3 in complex with Cullin3.
Plos One, 8, 2013
3WJF
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BU of 3wjf by Molmil
Crystal structure of mutant nitrobindin M75L/H76L/Q96C/V128W/M148L/H158L (NB9) from Arabidopsis thaliana
Descriptor: UPF0678 fatty acid-binding protein-like protein At1g79260
Authors:Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
Deposit date:2013-10-08
Release date:2014-04-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
5HBM
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BU of 5hbm by Molmil
Crystal Structure of a Dihydroxycoumarin RNase H Active-Site Inhibitor in Complex with HIV-1 Reverse Transcriptase
Descriptor: (7,8-dihydroxy-2-oxo-2H-chromen-4-yl)acetic acid, 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, MANGANESE (II) ION, ...
Authors:Kirby, K.A, Sarafianos, S.G.
Deposit date:2015-12-31
Release date:2016-02-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.043 Å)
Cite:Crystal Structure of a Dihydroxycoumarin RNase H Active-Site Inhibitor in Complex with HIV-1 Reverse Transcriptase
To Be Published
1MYU
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BU of 1myu by Molmil
Lipid induced conformation of the tachykinin peptide Kassinin
Descriptor: Kassinin
Authors:Grace, R.C, Lynn, A.M, Cowsik, S.M.
Deposit date:2002-10-04
Release date:2002-10-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Lipid induced conformation of the tachykinin peptide Kassinin.
J.Biomol.Struct.Dyn., 18, 2001
3WL6
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BU of 3wl6 by Molmil
Crystal Structure of pOPH Native
Descriptor: CITRIC ACID, Oxidized polyvinyl alcohol hydrolase
Authors:Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chan, H.C, Ren, F.F, Jia, D.X, Wang, A.H.-J, Guo, R.T, Chen, J, Du, G.C.
Deposit date:2013-11-08
Release date:2014-09-24
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into enzymatic degradation of oxidized polyvinyl alcohol
Chembiochem, 15, 2014
3L6U
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BU of 3l6u by Molmil
Crystal structure of abc-type sugar transport system, Periplasmic component from exiguobacterium sibiricum
Descriptor: ABC-TYPE SUGAR TRANSPORT SYSTEM PERIPLASMIC COMPONENT, SULFATE ION
Authors:Fedorov, A.A, Fedorov, E.V, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-12-25
Release date:2010-01-12
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of abc-type sugar transport system, Periplasmic component from exiguobacterium sibiricum
To be Published
3Q07
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BU of 3q07 by Molmil
CTX-M-9 S70G in complex with piperacillin
Descriptor: Beta-lactamase, Hydrolyzed piperacillin, Piperacillin
Authors:Delmas, J, Leyssne, D, Robin, F, Coignoux, A, Bonnet, R.
Deposit date:2010-12-15
Release date:2011-12-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:CTX-M-9 S70G mutant in complex with piperacillin
To be Published
4DTW
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BU of 4dtw by Molmil
cytochrome P450 BM3h-8C8 MRI sensor bound to serotonin
Descriptor: Cytochrome P450 BM3 variant 8C8, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Brustad, E.M, Lelyveld, V.S, Snow, C.D, Crook, N, Martinez, F.M, Scholl, T.J, Jasanoff, A, Arnold, F.H.
Deposit date:2012-02-21
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-guided directed evolution of highly selective p450-based magnetic resonance imaging sensors for dopamine and serotonin.
J.Mol.Biol., 422, 2012
4HYR
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BU of 4hyr by Molmil
Structure of putative Glucarate dehydratase from Acidaminococcus sp. D21 with unusual static disorder
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Hegde, R.P, Toro, R, Burley, S.K, Almo, S.C, Ramagopal, U.A, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-11-14
Release date:2013-02-13
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structure of putative Glucarate dehydratase from Acidaminococcus sp. D21 with unusual static disorder
To be published
3PNK
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BU of 3pnk by Molmil
Crystal Structure of E.coli Dha kinase DhaK
Descriptor: GLYCEROL, PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK
Authors:Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2010-11-19
Release date:2011-01-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3CEZ
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BU of 3cez by Molmil
Crystal structure of methionine-R-sulfoxide reductase from Burkholderia pseudomallei
Descriptor: ACETIC ACID, Methionine-R-sulfoxide reductase, ZINC ION
Authors:Staker, B, Napuli, A, Nakazawa, S.H, Castaneda, L, Alkafeef, S, Vanvoorhis, W, Stewart, L, Myler, P, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2008-02-29
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Methionine-R-sulfoxide reductase from Burkholderia pseudomallei.
To be Published
5RHM
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BU of 5rhm by Molmil
PanDDA analysis group deposition -- Crystal Structure of Zika virus NS3 Helicase in complex with Z1454310449
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, N-[(2-fluorophenyl)methyl]-1H-pyrazol-4-amine, ...
Authors:Godoy, A.S, Mesquita, N.C.M.R, Oliva, G.
Deposit date:2020-05-25
Release date:2020-06-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:PanDDA analysis group deposition
To Be Published
1MUF
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BU of 1muf by Molmil
Structure of histone H3 K4-specific methyltransferase SET7/9
Descriptor: SET9
Authors:Jacobs, S.A, Harp, J.M, Devarakonda, S, Kim, Y, Rastinejad, F, Khorasanizadeh, S.
Deposit date:2002-09-23
Release date:2002-11-06
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:The active site of the SET domain is constructed on a knot
Nat.Struct.Biol., 9, 2002
1N4C
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BU of 1n4c by Molmil
NMR Structure of the J-Domain and Clathrin Substrate Binding Domain of Bovine Auxilin
Descriptor: Auxilin
Authors:Gruschus, J.M, Han, C.J, Greener, T, Greene, L.E, Ferretti, J.A, Eisenberg, E.
Deposit date:2002-10-30
Release date:2003-11-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the functional fragment of auxilin required for catalytic uncoating of clathrin-coated vesicles.
Biochemistry, 43, 2004

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