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PDB: 89111 results

4FAW
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BU of 4faw by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragment
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-R(*A*UP*UP*UP*AP*UP*UP*A)-3', Group IIC intron, ...
Authors:Marcia, M, Pyle, A.M.
Deposit date:2012-05-22
Release date:2012-11-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
8C3G
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BU of 8c3g by Molmil
Crystal structure of DYRK1A in complex with AZ191
Descriptor: 1,2-ETHANEDIOL, Dual specificity tyrosine-phosphorylation-regulated kinase 1A, N-[2-methoxy-4-(4-methylpiperazin-1-yl)phenyl]-4-(1-methylpyrrolo[2,3-c]pyridin-3-yl)pyrimidin-2-amine, ...
Authors:Grygier, P, Pustelny, K, Dubin, G, Czarna, A.
Deposit date:2022-12-23
Release date:2024-01-10
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural perspective on the design of selective DYRK1B inhibitors
To Be Published
5HP5
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BU of 5hp5 by Molmil
Srtucture of human peptidylarginine deiminase type I (PAD1)
Descriptor: CALCIUM ION, Protein-arginine deiminase type-1
Authors:Unno, M, Nagai, A, Saijo, S, Shimizu, N, Kinjo, S, Mashimo, R, Kizawa, K, Takahara, H.
Deposit date:2016-01-20
Release date:2016-07-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.198 Å)
Cite:Monomeric Form of Peptidylarginine Deiminase Type I Revealed by X-ray Crystallography and Small-Angle X-ray Scattering
J.Mol.Biol., 428, 2016
4ZFI
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BU of 4zfi by Molmil
Structure of Mdm2 with low molecular weight inhibitor
Descriptor: (5S)-3,5-bis(4-chlorobenzyl)-4-(6-chloro-1H-indol-3-yl)-5-hydroxy-1-methyl-1,5-dihydro-2H-pyrrol-2-one, E3 ubiquitin-protein ligase Mdm2
Authors:Zak, K.M, Twarda-Clapa, A, Wrona, E.M, Grudnik, P, Dubin, G, Holak, T.A.
Deposit date:2015-04-21
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Unique Mdm2-Binding Mode of the 3-Pyrrolin-2-one- and 2-Furanone-Based Antagonists of the p53-Mdm2 Interaction.
ACS Chem. Biol., 11, 2016
5YVV
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BU of 5yvv by Molmil
Crystal structure of full length NS3 protein (gD4NS2BNS3) from DENV4 in closed conformation
Descriptor: Genome polyprotein
Authors:PHOO, W.W, Sahili, A.E.
Deposit date:2017-11-27
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.097 Å)
Cite:Crystal structures of unlinked full length NS3 from Dengue virus provide insights into dynamics of protease domain
To Be Published
5AFN
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BU of 5afn by Molmil
alpha7-AChBP in complex with lobeline and fragment 5
Descriptor: (4R)-4-(2-phenylethyl)pyrrolidin-2-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINE-BINDING PROTEIN, ...
Authors:Spurny, R, Debaveye, S, Farinha, A, Veys, K, Gossas, T, Atack, J, Bertrand, D, Kemp, J, Vos, A, Danielson, U.H, Tresadern, G, Ulens, C.
Deposit date:2015-01-22
Release date:2015-05-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.149 Å)
Cite:Molecular Blueprint of Allosteric Binding Sites in a Homologue of the Agonist-Binding Domain of the Alpha7 Nicotinic Acetylcholine Receptor.
Proc.Natl.Acad.Sci.USA, 112, 2015
1ADJ
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BU of 1adj by Molmil
HISTIDYL-TRNA SYNTHETASE IN COMPLEX WITH HISTIDINE
Descriptor: HISTIDINE, HISTIDYL-TRNA SYNTHETASE, SULFATE ION
Authors:Cusack, S, Aberg, A.
Deposit date:1997-02-18
Release date:1997-08-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure analysis of the activation of histidine by Thermus thermophilus histidyl-tRNA synthetase.
Biochemistry, 36, 1997
6ME2
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BU of 6me2 by Molmil
XFEL crystal structure of human melatonin receptor MT1 in complex with ramelteon
Descriptor: DI(HYDROXYETHYL)ETHER, N-{2-[(8S)-1,6,7,8-tetrahydro-2H-indeno[5,4-b]furan-8-yl]ethyl}propanamide, OLEIC ACID, ...
Authors:Stauch, B, Johansson, L.C, McCorvy, J.D, Patel, N, Han, G.W, Gati, C, Batyuk, A, Ishchenko, A, Brehm, W, White, T.A, Michaelian, N, Madsen, C, Zhu, L, Grant, T.D, Grandner, J.M, Olsen, R.H.J, Tribo, A.R, Weierstall, U, Roth, B.L, Katritch, V, Liu, W, Cherezov, V.
Deposit date:2018-09-05
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of ligand recognition at the human MT1melatonin receptor.
Nature, 569, 2019
6G1N
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BU of 6g1n by Molmil
Crystal structure of the Burkholderia Pseudomallei antitoxin HicB
Descriptor: CHLORIDE ION, GLYCEROL, antitoxin HicB
Authors:Winter, A.J, Williams, C, Crump, M.P.
Deposit date:2018-03-21
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The molecular basis of protein toxin HicA-dependent binding of the protein antitoxin HicB to DNA.
J. Biol. Chem., 293, 2018
6IFF
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BU of 6iff by Molmil
Crystal structure of M1 zinc metallopeptidase E323A mutant from Deinococcus radiodurans
Descriptor: SODIUM ION, TYROSINE, ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Kumar, A, Gaur, N.K, Makde, R.D.
Deposit date:2018-09-20
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.
Int.J.Biol.Macromol., 147, 2020
5A46
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BU of 5a46 by Molmil
FGFR1 in complex with dovitinib
Descriptor: 1,2-ETHANEDIOL, 4-amino-5-fluoro-3-[5-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]quinolin-2(1H)-one, FIBROBLAST GROWTH FACTOR RECEPTOR 1 (FMS-RELATED TYROSINE KINASE 2, ...
Authors:Klein, T, Vajpai, N, Phillips, J.J, Davies, G, Holdgate, G.A, Phillips, C, Tucker, J.A, Norman, R.A, Scott, A.S, Higazi, D.R, Lowe, D, Thompson, G.S, Breeze, A.L.
Deposit date:2015-06-05
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structural and Dynamic Insights Into the Energetics of Activation Loop Rearrangement in Fgfr1 Kinase.
Nat.Commun., 6, 2015
8RHS
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BU of 8rhs by Molmil
Structure of the ZnF domain from human Roquin-1
Descriptor: Roquin-1
Authors:Schlundt, A, Tants, J.N.
Deposit date:2023-12-16
Release date:2024-07-03
Last modified:2024-07-17
Method:SOLUTION NMR
Cite:Structure and RNA-binding of the helically extended Roquin CCCH-type zinc finger.
Nucleic Acids Res., 2024
1AAW
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BU of 1aaw by Molmil
THE STRUCTURAL BASIS FOR THE ALTERED SUBSTRATE SPECIFICITY OF THE R292D ACTIVE SITE MUTANT OF ASPARTATE AMINOTRANSFERASE FROM E. COLI
Descriptor: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Almo, S.C, Smith, D.L, Danishefsky, A.T, Ringe, D.
Deposit date:1993-07-13
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structural basis for the altered substrate specificity of the R292D active site mutant of aspartate aminotransferase from E. coli.
Protein Eng., 7, 1994
6BSY
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BU of 6bsy by Molmil
HIV-1 Rev assembly domain (residues 1-69)
Descriptor: PHOSPHATE ION, Protein Rev
Authors:Watts, N.R, Eren, E, Zhuang, X, Wang, Y.X, Steven, A.C, Wingfield, P.T.
Deposit date:2017-12-04
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A new HIV-1 Rev structure optimizes interaction with target RNA (RRE) for nuclear export.
J. Struct. Biol., 203, 2018
6G8Z
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BU of 6g8z by Molmil
Structure of the pore domain of homomeric mLRRC8A volume-regulated anion channel at 3.66 A resolution
Descriptor: Volume-regulated anion channel subunit LRRC8A
Authors:Sawicka, M, Deneka, D, Lam, A.K.M, Paulino, C, Dutzler, R.
Deposit date:2018-04-10
Release date:2018-05-16
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Structure of a volume-regulated anion channel of the LRRC8 family.
Nature, 558, 2018
6BMM
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BU of 6bmm by Molmil
Structure of human DHHC20 palmitoyltransferase, space group P21
Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S,5S)-hexane-2,5-diol, PHOSPHATE ION, ...
Authors:Rana, M.S, Lee, C.-J, Banerjee, A.
Deposit date:2017-11-15
Release date:2018-01-24
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Fatty acyl recognition and transfer by an integral membraneS-acyltransferase.
Science, 359, 2018
6BT9
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BU of 6bt9 by Molmil
Chitinase ChiA74 from Bacillus thuringiensis
Descriptor: CALCIUM ION, Chitinase
Authors:Juarez-Hernandez, E, Brieba, L.G, Torres-Larios, A, Jimenez-Sandoval, P, Barboza-Corona, J.
Deposit date:2017-12-05
Release date:2019-03-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:The crystal structure of the chitinase ChiA74 of Bacillus thuringiensis has a multidomain assembly.
Sci Rep, 9, 2019
5HEL
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BU of 5hel by Molmil
Crystal structure of the N-terminus Y153H bromodomain mutant of human BRD2
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 2
Authors:Tallant, C, Lori, C, Pasquo, A, Chiaraluce, R, Consalvi, V, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S.
Deposit date:2016-01-06
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of the N-terminus Y153H bromodomain mutant of human BRD2
To Be Published
1AI1
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BU of 1ai1 by Molmil
HIV-1 V3 LOOP MIMIC
Descriptor: AIB142, IGG1-KAPPA 59.1 FAB (HEAVY CHAIN), IGG1-KAPPA 59.1 FAB (LIGHT CHAIN)
Authors:Ghiara, J.B, Wilson, I.A.
Deposit date:1996-11-06
Release date:1997-05-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-based design of a constrained peptide mimic of the HIV-1 V3 loop neutralization site.
J.Mol.Biol., 266, 1997
5HG0
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BU of 5hg0 by Molmil
Crystal Structure of Pantoate-beta-alanine Ligase from Francisella tularensis complex with SAM
Descriptor: Pantothenate synthetase, S-ADENOSYLMETHIONINE
Authors:Chang, C, Maltseva, N, Kim, Y, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-01-07
Release date:2016-01-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Pantoate-beta-alanine Ligase from Francisella tularensis complex with SAM
To Be Published
7L0C
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BU of 7l0c by Molmil
Ligand-free PTP1B T177G
Descriptor: Tyrosine-protein phosphatase non-receptor type 1
Authors:Shen, R.D, Hengge, A.C, Johnson, S.J.
Deposit date:2020-12-11
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Single Residue on the WPD-Loop Affects the pH Dependency of Catalysis in Protein Tyrosine Phosphatases.
Jacs Au, 1, 2021
6HIE
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BU of 6hie by Molmil
The ATAD2 bromodomain in complex with compound 17
Descriptor: (2~{R})-1-[2-[4,4-bis(fluoranyl)cyclohexyl]ethyl]-~{N}-(4-ethanoyl-1,3-thiazol-2-yl)piperazine-2-carboxamide, ATPase family AAA domain-containing protein 2, SULFATE ION
Authors:Sledz, P, Caflisch, A.
Deposit date:2018-08-29
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Hitting a Moving Target: Simulation and Crystallography Study of ATAD2 Bromodomain Blockers.
Acs Med.Chem.Lett., 11, 2020
5HGO
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BU of 5hgo by Molmil
Hexameric HIV-1 CA R18G mutant
Descriptor: Capsid protein P24
Authors:Jacques, D.A, James, L.C.
Deposit date:2016-01-08
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:HIV-1 uses dynamic capsid pores to import nucleotides and fuel encapsidated DNA synthesis.
Nature, 536, 2016
5Z3S
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BU of 5z3s by Molmil
Crystal structure of butanol modified signaling protein from buffalo (SPB-40) at 1.65 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-BUTANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Singh, P.K, Chaudhary, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2018-01-08
Release date:2018-02-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A glycoprotein from mammary gland secreted during involution promotes apoptosis: Structural and biological studies.
Arch. Biochem. Biophys., 644, 2018
7L0M
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BU of 7l0m by Molmil
Vanadate-bound YopH G352T
Descriptor: Protein-tyrosine-phosphatase, VANADATE ION
Authors:Shen, R.D, Hengge, A.C, Johnson, S.J.
Deposit date:2020-12-11
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Single Residue on the WPD-Loop Affects the pH Dependency of Catalysis in Protein Tyrosine Phosphatases.
Jacs Au, 1, 2021

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