Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89111 results

7O0R
DownloadVisualize
BU of 7o0r by Molmil
Crystal structure of the human METTL3-METTL14 complex bound to Compound 15 (ADO_AE_026)
Descriptor: 4-[4-[(4,4-dimethylpiperidin-1-yl)methyl]phenyl]-9-[6-(propan-2-ylamino)pyrimidin-4-yl]-1,4,9-triazaspiro[5.5]undecan-2-one, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
Authors:Bedi, R.K, Dolbois, A, Caflisch, A.
Deposit date:2021-03-26
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the human METTL3-METTL14 complex bound to Compound 15 (ADO_AE_026)
To Be Published
7O27
DownloadVisualize
BU of 7o27 by Molmil
Crystal structure of the human METTL3-METTL14 complex bound to Compound 17 (ADO_AE_005)
Descriptor: 4-[4-[(4,4-dimethylpiperidin-1-yl)methyl]phenyl]-9-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1,4,9-triazaspiro[5.5]undecan-2-one, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
Authors:Bedi, R.K, Dolbois, A, Caflisch, A.
Deposit date:2021-03-30
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the human METTL3-METTL14 complex bound to Compound 17 (ADO_AE_005)
To Be Published
8EZT
DownloadVisualize
BU of 8ezt by Molmil
Crystal structure of HipB(Lp) from Legionella pneumophila
Descriptor: CHLORIDE ION, HipB(Lp)
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Lin, J, Ensminger, A, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-11-01
Release date:2023-09-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal structure of HipB(Lp) from Legionella pneumophila
To Be Published
7O28
DownloadVisualize
BU of 7o28 by Molmil
Crystal structure of the human METTL3-METTL14 complex bound to Compound 19 (ADO_AE_009)
Descriptor: 9-(2-chloranyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)-4-[4-[(4,4-dimethylpiperidin-1-yl)methyl]phenyl]-1,4,9-triazaspiro[5.5]undecan-2-one, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
Authors:Bedi, R.K, Dolbois, A, Caflisch, A.
Deposit date:2021-03-30
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystal structure of the human METTL3-METTL14 complex bound to Compound 19 (ADO_AE_009)
To Be Published
7VNN
DownloadVisualize
BU of 7vnn by Molmil
Complex structure of Clostridioides difficile enzymatic component (CDTa) and binding component (CDTb) pore with long stem
Descriptor: ADP-ribosylating binary toxin binding subunit CdtB, CALCIUM ION, CdtA
Authors:Yamada, T, Kawamoto, A, Yoshida, T, Sato, Y, Kato, T, Tsuge, H.
Deposit date:2021-10-11
Release date:2022-10-26
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Cryo-EM structures of the translocational binary toxin complex CDTa-bound CDTb-pore from Clostridioides difficile.
Nat Commun, 13, 2022
5TMN
DownloadVisualize
BU of 5tmn by Molmil
Slow-and fast-binding inhibitors of thermolysin display different modes of binding. crystallographic analysis of extended phosphonamidate transition-state analogues
Descriptor: CALCIUM ION, N-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-L-leucyl-L-leucine, THERMOLYSIN, ...
Authors:Holden, H.M, Tronrud, D.E, Monzingo, A.F, Weaver, L.H, Matthews, B.W.
Deposit date:1987-06-29
Release date:1989-01-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Slow- and fast-binding inhibitors of thermolysin display different modes of binding: crystallographic analysis of extended phosphonamidate transition-state analogues.
Biochemistry, 26, 1987
5HTB
DownloadVisualize
BU of 5htb by Molmil
Crystal structure of haspin (GSG2) in complex with bisubstrate inhibitor ARC-3353
Descriptor: (3R)-4-amino-3-{[6-({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]carbonyl}amino)hexanoyl]amino}-4-oxobutanoic acid (non-preferred name), (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Chaikuad, A, Heroven, C, Lavogina, D, Kestav, K, Uri, A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2016-01-26
Release date:2016-05-11
Last modified:2023-04-26
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Co-crystal structures of the protein kinase haspin with bisubstrate inhibitors.
Acta Crystallogr.,Sect.F, 72, 2016
8C3F
DownloadVisualize
BU of 8c3f by Molmil
Double mutant I(L177)H/F(M197)H structure of Photosynthetic Reaction Center From Cereibacter sphaeroides strain RV
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Gabdulkhakov, A.G, Selikhanov, G.K, Fufina, T.Y, Vasilieva, L.G.
Deposit date:2022-12-23
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Properties and Crystal Structure of the Cereibacter sphaeroides Photosynthetic Reaction Center with Double Amino Acid Substitution I(L177)H + F(M197)H.
Membranes (Basel), 13, 2023
4ZTE
DownloadVisualize
BU of 4zte by Molmil
Crystal structure of human E-Cadherin (residues 3-213) in complex with a peptidomimetic inhibitor
Descriptor: CALCIUM ION, Cadherin-1, N-{[(2S,5S)-1-benzyl-5-(2-{[(2S,3S)-1-(tert-butylamino)-3-methyl-1-oxopentan-2-yl]amino}-2-oxoethyl)-3,6-dioxopiperazin-2-yl]methyl}-L-alpha-asparagine
Authors:Nardone, V, Lucarelli, A.P, Dalle Vedove, A, Parisini, E.
Deposit date:2015-05-14
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal Structure of Human E-Cadherin-EC1EC2 in Complex with a Peptidomimetic Competitive Inhibitor of Cadherin Homophilic Interaction.
J.Med.Chem., 59, 2016
1A3I
DownloadVisualize
BU of 1a3i by Molmil
X-RAY CRYSTALLOGRAPHIC DETERMINATION OF A COLLAGEN-LIKE PEPTIDE WITH THE REPEATING SEQUENCE (PRO-PRO-GLY)
Descriptor: ACETIC ACID, COLLAGEN-LIKE PEPTIDE
Authors:Kramer, R.Z, Vitagliano, L, Bella, J, Berisio, R, Mazzarella, L, Brodsky, B, Zagari, A, Berman, H.M.
Deposit date:1998-01-22
Release date:1998-05-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:X-ray crystallographic determination of a collagen-like peptide with the repeating sequence (Pro-Pro-Gly).
J.Mol.Biol., 280, 1998
7O0P
DownloadVisualize
BU of 7o0p by Molmil
Crystal structure of the human METTL3-METTL14 complex bound to Compound 10 (ADO_AD_022)
Descriptor: 4-[4-[(4,4-dimethylpiperidin-1-yl)methyl]phenyl]-9-[6-(methylamino)pyrimidin-4-yl]-1,4,9-triazaspiro[5.5]undecan-2-one, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
Authors:Bedi, R.K, Dolbois, A, Caflisch, A.
Deposit date:2021-03-26
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the human METTL3-METTL14 complex bound to Compound 10 (ADO_AD_022)
To Be Published
1A4B
DownloadVisualize
BU of 1a4b by Molmil
AZURIN MUTANT WITH MET 121 REPLACED BY HIS, PH 6.5 CRYSTAL FORM, DATA COLLECTED AT-180 DEGREES CELSIUS
Descriptor: AZURIN, COPPER (II) ION, SULFATE ION
Authors:Messerschmidt, A, Prade, L.
Deposit date:1998-01-28
Release date:1998-04-29
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Rack-induced metal binding vs. flexibility: Met121His azurin crystal structures at different pH.
Proc.Natl.Acad.Sci.USA, 95, 1998
7SH1
DownloadVisualize
BU of 7sh1 by Molmil
Class II UvrA protein - Ecm16
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Excinuclease ABC subunit UvrA, ...
Authors:Grade, P, Erlandson, A, Ullah, A, Mathews, I.I, Chen, X, Kim, C.-Y, Mera, P.E.
Deposit date:2021-10-07
Release date:2022-10-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural and functional analyses of the echinomycin resistance conferring protein Ecm16 from Streptomyces lasalocidi.
Sci Rep, 13, 2023
5L10
DownloadVisualize
BU of 5l10 by Molmil
Crystal Structure of N-Acylhomoserine Lactone Dependent LuxR Family Transcriptionl Factor CepR2 from Burkholderia cenocepacia
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, GLYCEROL, ...
Authors:Kim, Y, Chhor, G, Jedrzejczak, R, Winan, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2016-07-28
Release date:2016-10-26
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal Structure of N-Acylhomoserine Lactone Dependent LuxR Family Transcriptionl Factor CepR2 from Burkholderia cenocepacia.
To Be Published
8EML
DownloadVisualize
BU of 8eml by Molmil
Crystal Structure of Gsx2 Homeodomain in Complex with DNA
Descriptor: DNA (5'-D(P*GP*AP*GP*CP*TP*AP*AP*TP*TP*AP*AP*AP*GP*C)-3'), DNA (5'-D(P*GP*CP*TP*TP*TP*AP*AP*TP*TP*AP*GP*CP*TP*C)-3'), GS homeobox 2, ...
Authors:Webb, J.A, Kovall, R.A.
Deposit date:2022-09-28
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal Structure of Gsx2 Homeodomain in Complex with DNA
To Be Published
7Z7D
DownloadVisualize
BU of 7z7d by Molmil
Tubulin-Todalam-Vinblastine-complex
Descriptor: (2ALPHA,2'BETA,3BETA,4ALPHA,5BETA)-VINCALEUKOBLASTINE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Muehlethaler, T, Milanos, L, Ortega, J.A, Blum, T.B, Gioia, D, Roy, B, Prota, A.E, Cavalli, A, Steinmetz, M.O.
Deposit date:2022-03-15
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational Design of a Novel Tubulin Inhibitor with a Unique Mechanism of Action.
Angew.Chem.Int.Ed.Engl., 61, 2022
6GR7
DownloadVisualize
BU of 6gr7 by Molmil
Crystal Structure Of Human Transthyretin in complex with 2,4,5-trichlorophenoxyacetic acid (2,4,5-T)
Descriptor: 2-[2,4,5-tris(chloranyl)phenoxy]ethanoic acid, Transthyretin
Authors:Grundstrom, C, Zhang, J, Olofsson, A, Andersson, P.L, Sauer-Eriksson, A.E.
Deposit date:2018-06-09
Release date:2018-07-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Interspecies Variation between Fish and Human Transthyretins in Their Binding of Thyroid-Disrupting Chemicals.
Environ. Sci. Technol., 52, 2018
7VNJ
DownloadVisualize
BU of 7vnj by Molmil
Complex structure of Clostridioides difficile enzymatic component (CDTa) and binding component (CDTb) pore with short stem
Descriptor: ADP-ribosylating binary toxin binding subunit CdtB, ADP-ribosyltransferase enzymatic component, CALCIUM ION
Authors:Yamada, T, Kawamoto, A, Yoshida, T, Sato, Y, Kato, T, Tsuge, H.
Deposit date:2021-10-11
Release date:2022-10-26
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Cryo-EM structures of the translocational binary toxin complex CDTa-bound CDTb-pore from Clostridioides difficile.
Nat Commun, 13, 2022
1A8P
DownloadVisualize
BU of 1a8p by Molmil
FERREDOXIN REDUCTASE FROM AZOTOBACTER VINELANDII
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADPH:FERREDOXIN OXIDOREDUCTASE
Authors:Prasad, G.S, Kresge, N, Muhlberg, A.B, Shaw, A, Jung, Y.S, Burgess, B.K, Stout, C.D.
Deposit date:1998-03-28
Release date:1998-06-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of NADPH:ferredoxin reductase from Azotobacter vinelandii.
Protein Sci., 7, 1998
1A9B
DownloadVisualize
BU of 1a9b by Molmil
DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS
Descriptor: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B*3501 (ALPHA CHAIN), ...
Authors:Menssen, R, Orth, P, Ziegler, A, Saenger, W.
Deposit date:1998-04-03
Release date:1998-10-21
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Decamer-like conformation of a nona-peptide bound to HLA-B*3501 due to non-standard positioning of the C terminus.
J.Mol.Biol., 285, 1999
7NR2
DownloadVisualize
BU of 7nr2 by Molmil
The structure of the SBP TarP_Sse in complex with coumarate
Descriptor: 4'-HYDROXYCINNAMIC ACID, SULFATE ION, TRAP dicarboxylate transporter, ...
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-02
Release date:2021-10-06
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NQG
DownloadVisualize
BU of 7nqg by Molmil
The structure of the SBP TarP_Rhp in complex with 4-hydroxyphenylacetate
Descriptor: 1,2-ETHANEDIOL, 4-HYDROXYPHENYLACETATE, PHOSPHATE ION, ...
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-01
Release date:2021-10-06
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NRA
DownloadVisualize
BU of 7nra by Molmil
The structure of the SBP TarP_Sse in complex with cinnamate
Descriptor: HYDROCINNAMIC ACID, TRAP dicarboxylate transporter, DctP subunit
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-03
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
1A3K
DownloadVisualize
BU of 1a3k by Molmil
X-RAY CRYSTAL STRUCTURE OF THE HUMAN GALECTIN-3 CARBOHYDRATE RECOGNITION DOMAIN (CRD) AT 2.1 ANGSTROM RESOLUTION
Descriptor: GALECTIN-3, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Seetharaman, J, Kanigsberg, A, Slaaby, R, Leffler, H, Barondes, S.H, Rini, J.M.
Deposit date:1998-01-22
Release date:1998-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray crystal structure of the human galectin-3 carbohydrate recognition domain at 2.1-A resolution.
J.Biol.Chem., 273, 1998
1ADF
DownloadVisualize
BU of 1adf by Molmil
CRYSTALLOGRAPHIC STUDIES OF TWO ALCOHOL DEHYDROGENASE-BOUND ANALOGS OF THIAZOLE-4-CARBOXAMIDE ADENINE DINUCLEOTIDE (TAD), THE ACTIVE ANABOLITE OF THE ANTITUMOR AGENT TIAZOFURIN
Descriptor: ALCOHOL DEHYDROGENASE, BETA-METHYLENE-THIAZOLE-4-CARBOXYAMIDE-ADENINE DINUCLEOTIDE, ZINC ION
Authors:Li, H, Hallows, W.A, Punzi, J.S, Marquez, V.E, Carrell, H.L, Pankiewicz, K.W, Watanabe, K.A, Goldstein, B.M.
Deposit date:1993-10-18
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystallographic studies of two alcohol dehydrogenase-bound analogues of thiazole-4-carboxamide adenine dinucleotide (TAD), the active anabolite of the antitumor agent tiazofurin.
Biochemistry, 33, 1994

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon