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PDB: 89111 results

7N89
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BU of 7n89 by Molmil
Room-temperature X-ray structure of SARS-CoV-2 main protease C145A mutant in complex with substrate Ac-SAVLQSGF-CONH2
Descriptor: 3C-like proteinase, ACE-SER-ALA-VAL-LEU-GLN-SER-GLY-PHE-NH2
Authors:Kovalevsky, A, Kneller, D.W, Coates, L.
Deposit date:2021-06-14
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Michaelis-like complex of SARS-CoV-2 main protease visualized by room-temperature X-ray crystallography.
Iucrj, 8, 2021
8SFD
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BU of 8sfd by Molmil
Crystal structure of the engineered SsoPox variant IVB10
Descriptor: Aryldialkylphosphatase, COBALT (II) ION, FE (III) ION, ...
Authors:Jacquet, P, Billot, R, Shimon, A, Hoekstra, N, Bergonzi, C, Jenks, A, Daude, D, Elias, M.H.
Deposit date:2023-04-10
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Changes in Active Site Loops Conformation Relates to a Transition from Lactonase to Phosphotriesterase
To Be Published
5I0Q
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BU of 5i0q by Molmil
Structure of human C4b-binding protein alpha chain CCP domains 1 and 2 in complex with the hypervariable region of mutant group A Streptococcus M2 (K65A, N66A) protein
Descriptor: C4b-binding protein alpha chain, M protein, serotype 2.1
Authors:Buffalo, C.Z, Bahn-Suh, A.J, Ghosh, P.
Deposit date:2016-02-04
Release date:2016-07-20
Last modified:2016-10-26
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:Conserved patterns hidden within group A Streptococcus M protein hypervariability recognize human C4b-binding protein.
Nat Microbiol, 1, 2016
4Z51
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BU of 4z51 by Molmil
High Resolution Human Septin 3 GTPase domain
Descriptor: MAGNESIUM ION, Neuronal-specific septin-3, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Valadares, N.F, Macedo, J.N, Leonardo, D.A, Brandao-Neto, J, Pereira, H.M, Matos, S.O, Araujo, A.P.U, Garratt, R.C.
Deposit date:2015-04-02
Release date:2016-04-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:A complete compendium of crystal structures for the human SEPT3 subgroup reveals functional plasticity at a specific septin interface
Iucrj, 2020
5I0V
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BU of 5i0v by Molmil
IRON AND COPPER-BOUND P19 FROM CAMPYLOBACTER JEJUNI UNDER OXIDIZING CONDITIONS
Descriptor: CHLORIDE ION, COPPER (II) ION, FE (III) ION, ...
Authors:Chan, A.C, Murphy, M.E.
Deposit date:2016-02-04
Release date:2017-02-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A copper site is required for iron transport by the periplasmic proteins P19 and FetP.
Metallomics, 12, 2020
8IJO
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BU of 8ijo by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to DNA: Y41F-L68F double mutant
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*GP*AP*GP*AP*CP*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*TP*C)-3'), ...
Authors:Adhav, V.A, Saikrishnan, K.
Deposit date:2023-02-27
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
4S1N
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BU of 4s1n by Molmil
The crystal structure of phosphoribosylglycinamide formyltransferase from Streptococcus pneumoniae TIGR4
Descriptor: CHLORIDE ION, Phosphoribosylglycinamide formyltransferase
Authors:Tan, K, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-01-14
Release date:2015-01-28
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure of phosphoribosylglycinamide formyltransferase from Streptococcus pneumoniae TIGR4
To be Published
6UHE
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BU of 6uhe by Molmil
Closed-form Crystal Structure of Human RYR Receptor 3 ( 848-1055)
Descriptor: Ryanodine receptor 3
Authors:Wu, R, Kim, Y, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2019-09-27
Release date:2020-08-05
Method:X-RAY DIFFRACTION (2.892 Å)
Cite:Closed-form Crystal Structure of Human RYR Receptor 3 ( 848-1055)
To Be Published
6DJZ
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BU of 6djz by Molmil
Human sigma-1 receptor bound to haloperidol
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-[4-(4-chlorophenyl)-4-hydroxypiperidin-1-yl]-1-(4-fluorophenyl)butan-1-one, GLYCEROL, ...
Authors:Schmidt, H.R, Kruse, A.C.
Deposit date:2018-05-28
Release date:2018-10-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.084 Å)
Cite:Structural basis for sigma1receptor ligand recognition.
Nat. Struct. Mol. Biol., 25, 2018
5I6K
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BU of 5i6k by Molmil
Crystal Structure of Copper Nitrite Reductase at 100K after 0.69 MGy
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, NITRITE ION
Authors:Horrell, S, Hough, M.A, Strange, R.W.
Deposit date:2016-02-16
Release date:2016-07-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Serial crystallography captures enzyme catalysis in copper nitrite reductase at atomic resolution from one crystal.
Iucrj, 3, 2016
5I6S
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BU of 5i6s by Molmil
Crystal structure of an endoglucanase from Penicillium verruculosum
Descriptor: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, endoglucanase
Authors:Nemashklaov, V, Vakhrusheva, A, Tishchenko, S, Gabdulkhakov, A, Kravchenko, O, Gusakov, A, Sinitsyn, A.
Deposit date:2016-02-16
Release date:2017-03-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of an endoglucanase from Penicillium verruculosum
To Be Published
4S3A
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BU of 4s3a by Molmil
IspG in complex with Intermediate I
Descriptor: (3S)-1,3-dihydroxy-4-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}-2-methylbut-2-ylium, carbokation intermediate, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, ...
Authors:Quitterer, F, Frank, A, Wang, K, Rao, G, O'Dowd, B, Li, J, Guerra, F, Abdel-Azeim, S, Bacher, A, Eppinger, J, Oldfield, E, Groll, M.
Deposit date:2015-01-26
Release date:2015-05-06
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Atomic-Resolution Structures of Discrete Stages on the Reaction Coordinate of the [Fe4S4] Enzyme IspG (GcpE).
J.Mol.Biol., 427, 2015
8SFK
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BU of 8sfk by Molmil
Crystal structure of the engineered SsoPox variant IVE2
Descriptor: Aryldialkylphosphatase, COBALT (II) ION, FE (III) ION, ...
Authors:Jacquet, P, Billot, R, Shimon, A, Hoekstra, N, Bergonzi, C, Jenks, A, Daude, D, Elias, M.H.
Deposit date:2023-04-11
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Changes in Active Site Loops Conformation Relates to a Transition from Lactonase to Phosphotriesterase
To Be Published
6UGF
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BU of 6ugf by Molmil
Katanin hexamer in the ring conformation with resolved protomer one in complex with substrate
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Meiotic spindle formation protein mei-1, ...
Authors:Zehr, E.A, Roll-Mecak, A.
Deposit date:2019-09-26
Release date:2019-10-09
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Katanin Grips the beta-Tubulin Tail through an Electropositive Double Spiral to Sever Microtubules.
Dev.Cell, 52, 2020
4YZ7
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BU of 4yz7 by Molmil
Crystal structure of Piratoxin I (PrTX-I) complexed to aristolochic acid
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 9-HYDROXY ARISTOLOCHIC ACID, Basic phospholipase A2 homolog piratoxin-1, ...
Authors:Fernandes, C.A.H, Fontes, M.R.M.
Deposit date:2015-03-24
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9589 Å)
Cite:Structural Basis for the Inhibition of a Phospholipase A2-Like Toxin by Caffeic and Aristolochic Acids.
Plos One, 10, 2015
8SFB
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BU of 8sfb by Molmil
Crystal structure of the engineered SsoPox variant IVA4
Descriptor: Aryldialkylphosphatase, COBALT (II) ION, FE (III) ION, ...
Authors:Jacquet, P, Billot, R, Shimon, A, Hoekstra, N, Bergonzi, C, Jenks, A, Daude, D, Elias, M.H.
Deposit date:2023-04-10
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Changes in Active Site Loops Conformation Relates to a Transition from Lactonase to Phosphotriesterase
To Be Published
4TQX
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BU of 4tqx by Molmil
Molecular Basis of Streptococcus mutans Sortase A Inhibition by Chalcone.
Descriptor: ACETIC ACID, SULFATE ION, Sortase, ...
Authors:Wallock-Richards, D.J, Marles-Wright, J, Clarke, D.J, Maitra, A, Dodds, M, Hanley, B, Campopiano, D.J.
Deposit date:2014-06-12
Release date:2015-05-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Molecular basis of Streptococcus mutans sortase A inhibition by the flavonoid natural product trans-chalcone.
Chem.Commun.(Camb.), 51, 2015
5Y02
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BU of 5y02 by Molmil
C-terminal peptide depleted mutant of hydroxynitrile lyase from Passiflora edulis (PeHNL) bound with (R)-mandelonitrile
Descriptor: (2R)-hydroxy(phenyl)ethanenitrile, HEXANE-1,6-DIOL, Hydroxynitrile lyase, ...
Authors:Motojima, F, Nuylert, A, Asano, Y.
Deposit date:2017-07-14
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure and catalytic mechanism of hydroxynitrile lyase from passion fruit, Passiflora edulis
FEBS J., 285, 2018
8SFC
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BU of 8sfc by Molmil
Crystal structure of the engineered SsoPox variant IVA4 in alternate state
Descriptor: Aryldialkylphosphatase, COBALT (II) ION, FE (III) ION, ...
Authors:Jacquet, P, Billot, R, Shimon, A, Hoekstra, N, Bergonzi, C, Jenks, A, Daude, D, Elias, M.H.
Deposit date:2023-04-10
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Changes in Active Site Loops Conformation Relates to a Transition from Lactonase to Phosphotriesterase
To Be Published
6FRK
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BU of 6frk by Molmil
Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
Descriptor: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Kobayashi, K, Jomaa, A, Ban, N.
Deposit date:2018-02-16
Release date:2018-03-28
Last modified:2018-05-02
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of a prehandover mammalian ribosomal SRP·SRP receptor targeting complex.
Science, 360, 2018
5Y19
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BU of 5y19 by Molmil
Crystal structure of Plasmodium falciparum aminopeptidase N in complex with (S)-2-((2S,3R)-3-amino-2-hydroxy-4-phenylbutanamido)- N-hydroxy-4-methylpentanamide.
Descriptor: (2S)-2-[[(2S,3R)-3-azanyl-2-oxidanyl-4-phenyl-butanoyl]amino]-4-methyl-N-oxidanyl-pentanamide, GLYCEROL, M1 family aminopeptidase, ...
Authors:Marapaka, A.K, Zhang, Y, Addlagatta, A.
Deposit date:2017-07-19
Release date:2018-08-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of Plasmodium falciparum aminopeptidase N in complex with (S)-2-((2S,3R)-3-amino-2-hydroxy-4-phenylbutanamido)- N-hydroxy-4-methylpentanamide.
To Be Published
5I8L
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BU of 5i8l by Molmil
Crystal structure of the full-length cell wall-binding module of Cpl7 mutant R223A
Descriptor: GLYCEROL, Lysozyme
Authors:Bernardo-Garcia, N, Silva-Martin, N, Uson, I, Hermoso, J.A.
Deposit date:2016-02-19
Release date:2017-03-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Deciphering how Cpl-7 cell wall-binding repeats recognize the bacterial peptidoglycan.
Sci Rep, 7, 2017
5HFK
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BU of 5hfk by Molmil
CRYSTAL STRUCTURE OF A GLUTATHIONE S-TRANSFERASE PROTEIN FROM ESCHERICHIA COLI OCh 157:H7 STR. SAKAI (ECs3186, TARGET EFI-507414) WITH BOUND GLUTATHIONE
Descriptor: Disulfide-bond oxidoreductase YfcG, GLUTATHIONE
Authors:Himmel, D.M, Toro, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Stead, M, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI), New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2016-01-07
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:CRYSTAL STRUCTURE OF A GLUTATHIONE S-TRANSFERASE PROTEIN FROM ESCHERICHIA COLI OCh 157:H7 STR. SAKAI (ECs3186, TARGET EFI-507414) WITH BOUND GLUTATHIONE
TO BE PUBLISHED
8IK8
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BU of 8ik8 by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to DNA: L68F mutant
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*GP*AP*GP*AP*CP*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*TP*C)-3'), ...
Authors:Adhav, V.A, Saikrishnan, K.
Deposit date:2023-02-28
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
7VBU
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BU of 7vbu by Molmil
Crystal structure of human pyruvate dehydrogenase kinase 2 in complex with compound 5
Descriptor: 8-cyclopropyl-2-methyl-9H-pyrido[2,3-b]indole, ACETATE ION, CHLORIDE ION, ...
Authors:Orita, T, Doi, S, Iwanaga, T, Fujishima, A, Adachi, T.
Deposit date:2021-09-01
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure-based drug design of novel and highly potent pyruvate dehydrogenase kinase inhibitors.
Bioorg.Med.Chem., 52, 2021

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數據於2024-09-11公開中

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