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PDB: 89832 results

8AQ9
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BU of 8aq9 by Molmil
Domain 2 of zinc-loaded Caenorhabditis elegans MTL-1
Descriptor: Metallothionein-1, ZINC ION
Authors:Leszczyszyn, O.I, Sturzenbaum, S.R, Blindauer, C.A.
Deposit date:2022-08-11
Release date:2024-01-17
Method:SOLUTION NMR
Cite:Juggling cadmium detoxification and zinc homeostasis: A division of labour between the two C. elegans metallothioneins.
Chemosphere, 350, 2023
8GA7
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BU of 8ga7 by Molmil
Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor: THR5
Authors:Huddy, T, Bera, A.K, Baker, D, Kang, A.
Deposit date:2023-02-22
Release date:2024-03-13
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
2ELN
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BU of 2eln by Molmil
Solution structure of the 11th C2H2 zinc finger of human Zinc finger protein 406
Descriptor: ZINC ION, Zinc finger protein 406
Authors:Tochio, N, Yoneyama, M, Koshiba, S, Watanabe, S, Harada, T, Umehara, T, Tanaka, A, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-27
Release date:2008-04-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 11th C2H2 zinc finger of human Zinc finger protein 406
To be Published
5J6C
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BU of 5j6c by Molmil
FMN-dependent Nitroreductase (CDR20291_0767) from Clostridium difficile R20291
Descriptor: FLAVIN MONONUCLEOTIDE, IMIDAZOLE, Putative reductase
Authors:Powell, S.M, Wang, B, Hessami, N, Najar, F.Z, Thomas, L.M, West, A.H, Karr, E.A, Richter-Addo, G.B.
Deposit date:2016-04-04
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.096 Å)
Cite:Crystal structures of two nitroreductases from hypervirulent Clostridium difficile and functionally related interactions with the antibiotic metronidazole.
Nitric Oxide, 60, 2016
2ELT
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BU of 2elt by Molmil
Solution structure of the 3rd C2H2 zinc finger of human Zinc finger protein 406
Descriptor: ZINC ION, Zinc finger protein 406
Authors:Tochio, N, Yoneyama, M, Koshiba, S, Watanabe, S, Harada, T, Umehara, T, Tanaka, A, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-27
Release date:2008-04-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 3rd C2H2 zinc finger of human Zinc finger protein 406
To be Published
6M8S
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BU of 6m8s by Molmil
Crystal structure of the KCTD12 H1 domain in complex with Gbeta1gamma2 subunits
Descriptor: BTB/POZ domain-containing protein KCTD12, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Authors:Zheng, S, Kruse, A.C.
Deposit date:2018-08-22
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.71 Å)
Cite:Structural basis for KCTD-mediated rapid desensitization of GABABsignalling.
Nature, 567, 2019
7MWA
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BU of 7mwa by Molmil
Crystal structure of 2-octaprenyl-6-methoxyphenol hydroxylase UbiH from Acinetobacter baumannii, apoenzyme
Descriptor: 1,2-ETHANEDIOL, 2-polyprenyl-6-methoxyphenol 4-hydroxylase, CHLORIDE ION, ...
Authors:Stogios, P.J, Evdokimova, E, Endres, M, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-05-16
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:UbiH from Acinetobacter baumannii
To Be Published
6ZOZ
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BU of 6zoz by Molmil
Structure of Disulphide-stabilized SARS-CoV-2 Spike Protein Trimer (x1 disulphide-bond mutant, S383C, D985C, K986P, V987P, single Arg S1/S2 cleavage site) in Locked State
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
Authors:Xiong, X, Qu, K, Scheres, S.H.W, Briggs, J.A.G.
Deposit date:2020-07-08
Release date:2020-07-22
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:A thermostable, closed SARS-CoV-2 spike protein trimer.
Nat.Struct.Mol.Biol., 27, 2020
2WF9
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BU of 2wf9 by Molmil
Structure of Beta-Phosphoglucomutase inhibited with Glucose-6- phosphate, and Beryllium trifluoride, crystal form 2
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, 6-O-phosphono-beta-D-glucopyranose, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Bowler, M.W, Baxter, N.J, Webster, C.E, Pollard, S, Alizadeh, T, Hounslow, A.M, Cliff, M.J, Bermel, W, Williams, N.H, Hollfelder, F, Blackburn, G.M, Waltho, J.P.
Deposit date:2009-04-03
Release date:2010-05-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Near Attack Conformers Dominate Beta-Phosphoglucomutase Complexes Where Geometry and Charge Distribution Reflect Those of Substrate.
Proc.Natl.Acad.Sci.USA, 109, 2012
4BOK
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BU of 4bok by Molmil
Crystal structure of Bacillus circulans TN-31 Aman6
Descriptor: ALPHA-1,6-MANNANASE
Authors:Striebeck, A, van Aalten, D.M.F.
Deposit date:2013-05-21
Release date:2014-05-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:The Structure of B. Circulans Aman6 Defines the Fold and Mechanism of the Gh-76 Mannoprotein Transglycosylases and Bacterial Mannosidases
To be Published
1DNE
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BU of 1dne by Molmil
MOLECULAR STRUCTURE OF THE NETROPSIN-D(CGCGATATCGCG) COMPLEX: DNA CONFORMATION IN AN ALTERNATING AT SEGMENT; CONFORMATION 2
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*TP*AP*TP*CP*GP*CP*G)-3'), NETROPSIN
Authors:Coll, M, Aymami, J, Van Der Marel, G.A, Van Boom, J.H, Rich, A, Wang, A.H.-J.
Deposit date:1988-09-14
Release date:1989-01-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular structure of the netropsin-d(CGCGATATCGCG) complex: DNA conformation in an alternating AT segment.
Biochemistry, 28, 1989
5JJP
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BU of 5jjp by Molmil
Crystal structure of CmiS6
Descriptor: Nonribosomal peptide synthase
Authors:Cieslak, J, Miyanaga, A, Kudo, F, Eguchi, T.
Deposit date:2016-04-25
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Biochemical characterization and structural insight into aliphatic beta-amino acid adenylation enzymes IdnL1 and CmiS6
Proteins, 85, 2017
6Y58
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BU of 6y58 by Molmil
Binary complex of 14-3-3 sigma (C38N) with the Estrogen Related Receptor gamma (LBD) phosphopeptide
Descriptor: 14-3-3 protein sigma, Estrogen Related Receptor gamma phosphopeptide, MAGNESIUM ION
Authors:Somsen, B.A, Sijbesma, E, Leijten-van de Gevel, I.A, Ottmann, C.
Deposit date:2020-02-25
Release date:2020-11-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.904 Å)
Cite:Fluorescence Anisotropy-Based Tethering for Discovery of Protein-Protein Interaction Stabilizers.
Acs Chem.Biol., 15, 2020
1ZTS
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BU of 1zts by Molmil
Solution Structure of Bacillus Subtilis Protein YQBG: Northeast Structural Genomics Consortium Target SR215
Descriptor: Hypothetical protein yqbG
Authors:Liu, G, Shen, Y, Xiao, R, Acton, T, Ma, L, Joachimiak, A, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-05-27
Release date:2005-07-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of protein yqbG from Bacillus subtilis reveals a novel alpha-helical protein fold.
Proteins, 62, 2006
6UTC
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BU of 6utc by Molmil
Intra-chain disulfide bonded ToxR periplasmic domain from Vibrio vulnificus
Descriptor: SULFATE ION, Transcriptional activator ToxR
Authors:Midgett, C.R, Swindell, R.A, Kull, F.J.
Deposit date:2019-10-29
Release date:2020-06-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.249 Å)
Cite:A disulfide constrains the ToxR periplasmic domain structure, altering its interactions with ToxS and bile-salts.
Sci Rep, 10, 2020
5FD8
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BU of 5fd8 by Molmil
Crystal Structure of MccF-like Protein (BA_5613) in complex with ASA (alanyl sulfamoyl adenylates)
Descriptor: '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, LD-carboxypeptidase family protein
Authors:Nocek, B, Severinov, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-15
Release date:2015-12-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of MccF-like Protein (BA_5613) in complex with ASA ( (alanyl sulfamoyl adenylates)
To Be Published
8Q52
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BU of 8q52 by Molmil
A PBP-like protein built from fragments of different folds
Descriptor: Leucine-specific-binding protein,Chemotaxis protein CheY, SULFATE ION
Authors:Shanmugaratnam, S, Toledo-Patino, S, Goetz, S.K, Farias-Rico, J.A, Hocker, B.
Deposit date:2023-08-08
Release date:2024-04-10
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Molecular handcraft of a well-folded protein chimera.
Febs Lett., 598, 2024
6PJN
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BU of 6pjn by Molmil
HIV-1 Protease NL4-3 WT in Complex with LR2-41
Descriptor: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,3S,5S)-3-hydroxy-5-({1-[(methoxycarbonyl)amino]cyclopentane-1-carbonyl}amino)-1,6-diphenylhexan-2-yl]carbamate, Protease NL4-3, SULFATE ION
Authors:Lockbaum, G.J, Rusere, L.N, Henes, M, Kosovrasti, K, Lee, S.K, Spielvogel, E, Nalivaika, E.A, Swanstrom, R, KurtYilmaz, N, Schiffer, C.A, Ali, A.
Deposit date:2019-06-28
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural Analysis of Potent Hybrid HIV-1 Protease Inhibitors Containing Bis-tetrahydrofuran in a Pseudosymmetric Dipeptide Isostere.
J.Med.Chem., 63, 2020
7K9N
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BU of 7k9n by Molmil
Co-crystal structure of alpha glucosidase with compound 2
Descriptor: (1S,2S,3R,4S,5S)-1-(hydroxymethyl)-5-[(9-methoxynonyl)amino]cyclohexane-1,2,3,4-tetrol, 1,2-ETHANEDIOL, Alpha glucosidase 2 alpha neutral subunit, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2020-09-29
Release date:2021-09-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:N-Substituted Valiolamine Derivatives as Potent Inhibitors of Endoplasmic Reticulum alpha-Glucosidases I and II with Antiviral Activity.
J.Med.Chem., 64, 2021
2WA9
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BU of 2wa9 by Molmil
Structural basis of N-end rule substrate recognition in Escherichia coli by the ClpAP adaptor protein ClpS - Trp peptide structure
Descriptor: ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS, TRP PEPTIDE
Authors:Schuenemann, V.J, Kralik, S.M, Albrecht, R, Spall, S.K, Truscott, K.N, Dougan, D.A, Zeth, K.
Deposit date:2009-02-03
Release date:2009-04-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Basis of N-End Rule Substrate Recognition in Escherichia Coli by the Clpap Adaptor Protein Clps.
Embo Rep., 10, 2009
5FEA
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BU of 5fea by Molmil
Domain Swapped Bromodomain from Leishmania donovani
Descriptor: BROMIDE ION, Bromosporine, Uncharacterized protein
Authors:Walker, J.R, Hou, C.F.D, Lin, Y.H, LOPPNAU, P, Dong, A, El Bakkouri, M, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Hui, R, Structural Genomics Consortium (SGC)
Deposit date:2015-12-16
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Domain Swapped Bromodomain from Leishmania donovani
To be published
5SYG
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BU of 5syg by Molmil
Cryo-EM reconstruction of zampanolide-bound microtubule
Descriptor: (2Z,4E)-N-[(S)-[(1S,2E,5S,8E,10Z,17S)-3,11-dimethyl-19-methylidene-7,13-dioxo-6,21-dioxabicyclo[15.3.1]henicosa-2,8,10-trien-5-yl](hydroxy)methyl]hexa-2,4-dienamide, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Kellogg, E.H, Hejab, N.M.A, Nogales, E.
Deposit date:2016-08-11
Release date:2017-02-01
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Insights into the Distinct Mechanisms of Action of Taxane and Non-Taxane Microtubule Stabilizers from Cryo-EM Structures.
J. Mol. Biol., 429, 2017
8GDR
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BU of 8gdr by Molmil
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21B10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Monoclonal antibody 002-S21B10 heavy chain variable domain, ...
Authors:Patel, A, Ortlund, E.A.
Deposit date:2023-03-06
Release date:2024-03-13
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Elucidating the mechanism of SARS-CoV-2 Omicron variant escape from a RBD class-3 human antibody
To Be Published
7K9O
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BU of 7k9o by Molmil
Co-crystal structure of alpha glucosidase with compound 3
Descriptor: (1~{S},2~{S},3~{R},4~{S},5~{S})-1-(hydroxymethyl)-5-[6-[[2-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]-4-(1,2,3,4-tetrazol-1-yl)phenyl]amino]hexylamino]cyclohexane-1,2,3,4-tetrol, 1,2-ETHANEDIOL, Alpha glucosidase 2 alpha neutral subunit, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2020-09-29
Release date:2021-09-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:N-Substituted Valiolamine Derivatives as Potent Inhibitors of Endoplasmic Reticulum alpha-Glucosidases I and II with Antiviral Activity.
J.Med.Chem., 64, 2021
6UXL
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BU of 6uxl by Molmil
Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Forrest complexed with PLP-Glycine
Descriptor: N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], Serine hydroxymethyltransferase
Authors:Korasick, D.A, Tanner, J.J, Beamer, L.J.
Deposit date:2019-11-07
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Impaired folate binding of serine hydroxymethyltransferase 8 from soybean underlies resistance to the soybean cyst nematode.
J.Biol.Chem., 295, 2020

227344

數據於2024-11-13公開中

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