Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88608 results

2VQ2
DownloadVisualize
BU of 2vq2 by Molmil
Crystal structure of PilW, widely conserved type IV pilus biogenesis factor
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Trinidade, M.B, Job, V, Contreras-Martel, C, Pelicic, V, Dessen, A.
Deposit date:2008-03-10
Release date:2008-05-27
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure of a widely conserved type IV pilus biogenesis factor that affects the stability of secretin multimers.
J. Mol. Biol., 378, 2008
1THZ
DownloadVisualize
BU of 1thz by Molmil
Crystal Structure of Avian AICAR Transformylase in Complex with a Novel Inhibitor Identified by Virtual Ligand Screening
Descriptor: 2-{(E)-[5-HYDROXY-3-METHYL-1-(2-METHYL-4-SULFOPHENYL)-1H-PYRAZOL-4-YL]DIAZENYL}-4-SULFOBENZOIC ACID, Bifunctional purine biosynthesis protein PURH, POTASSIUM ION
Authors:Xu, L, Li, C, Olson, A.J, Wilson, I.A.
Deposit date:2004-06-01
Release date:2004-09-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of avian aminoimidazole-4-carboxamide ribonucleotide transformylase in complex with a novel non-folate inhibitor identified by virtual ligand screening.
J.Biol.Chem., 279, 2004
5KGV
DownloadVisualize
BU of 5kgv by Molmil
Structural impact of single ribonucleotides in DNA
Descriptor: DNA (5'-D(*GP*AP*GP*CP*TP*CP*CP*AP*T)-3'), DNA/RNA (5'-D(*AP*TP*GP*GP*A)-R(P*G)-D(P*CP*TP*C)-3')
Authors:Evich, M, Spring-Connell, A.M, Storici, F.
Deposit date:2016-06-13
Release date:2016-08-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Impact of Single Ribonucleotide Residues in DNA.
Chembiochem, 17, 2016
6PBR
DownloadVisualize
BU of 6pbr by Molmil
Catalytic domain of E.coli dihydrolipoamide succinyltransferase in I4 space group
Descriptor: Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, SODIUM ION
Authors:Andi, B, Soares, A.S, Shi, W, Fuchs, M.R, McSweeney, S, Liu, Q.
Deposit date:2019-06-14
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the dihydrolipoamide succinyltransferase catalytic domain from Escherichia coli in a novel crystal form: a tale of a common protein crystallization contaminant.
Acta Crystallogr.,Sect.F, 75, 2019
2I5S
DownloadVisualize
BU of 2i5s by Molmil
Crystal structure of onconase with bound nucleic acid
Descriptor: 5'-D(*A*(DU)P*GP*A)-3', P-30 protein
Authors:Bae, E, Lee, J.E, Raines, R.T, Wesenberg, G.E, Phillips Jr, G.N, Bitto, E, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2006-08-25
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for catalysis by onconase.
J.Mol.Biol., 375, 2008
3X0W
DownloadVisualize
BU of 3x0w by Molmil
Crystal structure of PLEKHM1 LIR-fused human LC3B_2-119
Descriptor: Microtubule-associated proteins 1A/1B light chain 3B
Authors:Suzuki, H, McEwan, D.G, Popovic, D, Gubas, A, Terawaki, S, Stadel, D, Coxon, F, Stegmann, D.M, Bhogaraju, S, Maddi, K, Kirchhoff, A, Gatti, E, Helfrich, M.H, Behrends, C, Pierre, P, Dikic, I, Wakatsuki, S.
Deposit date:2014-10-22
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:PLEKHM1 regulates autophagosome-lysosome fusion through HOPS complex and LC3/GABARAP proteins.
Mol.Cell, 57, 2015
6VV3
DownloadVisualize
BU of 6vv3 by Molmil
Crystal structure of Eis from Mycobacterium tuberculosis in complex with inhibitor SGT1358
Descriptor: 2-[(4-amino-6,7,8,9-tetrahydro-5H-cyclohepta[4,5]thieno[2,3-d]pyrimidin-2-yl)sulfanyl]-N-[2-(piperidin-1-yl)ethyl]acetamide, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Punetha, A, Hou, C, Ngo, H.X, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2020-02-16
Release date:2020-06-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-Guided Optimization of Inhibitors of Acetyltransferase Eis fromMycobacterium tuberculosis.
Acs Chem.Biol., 15, 2020
2WBO
DownloadVisualize
BU of 2wbo by Molmil
Crystal structure of VioC in complex with L-arginine
Descriptor: ARGININE, FE (II) ION, L(+)-TARTARIC ACID, ...
Authors:Helmetag, V, Samel, S.A, Thomas, M.G, Marahiel, M.A, Essen, L.-O.
Deposit date:2009-03-02
Release date:2009-06-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Basis for the Erythro-Stereospecificity of the L-Arginine Oxygenase Vioc in Viomycin Biosynthesis.
FEBS J., 276, 2009
6PLJ
DownloadVisualize
BU of 6plj by Molmil
A nucleotidyl transferase from Methanothermobacter thermautotroptrophicus (Mth528)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ...
Authors:Carbone, V, Schofield, L, Sutherland-Smith, A, Ronimus, R.
Deposit date:2019-07-01
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:A nucleotidyl transferase from Methanothermobacter thermautotroptrophicus (Mth528)
To Be Published
4R0J
DownloadVisualize
BU of 4r0j by Molmil
The crystal structure of a functionally uncharacterized protein SMU1763c from Streptococcus mutans
Descriptor: CHLORIDE ION, SULFATE ION, Uncharacterized protein
Authors:Tan, K, Xu, X, Cui, H, Liu, S, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-07-31
Release date:2014-08-13
Method:X-RAY DIFFRACTION (1.715 Å)
Cite:The crystal structure of a functionally uncharacterized protein SMU1763c from Streptococcus mutans
To be Published
7AEQ
DownloadVisualize
BU of 7aeq by Molmil
Human carbonic anhydrase II in complex with 2,3,5,6-tetrafluoro-4-(2-hydroxyethylsulfanyl)-N-methyl-benzenesulfonamide
Descriptor: 2,3,5,6-tetrakis(fluoranyl)-4-(2-hydroxyethylsulfanyl)-~{N}-methyl-benzenesulfonamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SODIUM ION, ...
Authors:Paketuryte, V, Smirnov, A, Manakova, E, Grazulis, S.
Deposit date:2020-09-18
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and mechanism of secondary sulfonamide binding to carbonic anhydrases.
Eur.Biophys.J., 50, 2021
8ILL
DownloadVisualize
BU of 8ill by Molmil
Crystal structure of a highly photostable and bright green fluorescent protein at pH5.6
Descriptor: CHLORIDE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose, green fluorescent protein
Authors:Ago, H, Ando, R, Hirano, M, Shimozono, S, Miyawaki, A, Yamamoto, M.
Deposit date:2023-03-03
Release date:2023-10-04
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:StayGold variants for molecular fusion and membrane-targeting applications.
Nat.Methods, 21, 2024
7AES
DownloadVisualize
BU of 7aes by Molmil
Human carbonic anhydrase II in complex with 2,3,5,6-tetrafluoro-N-methyl-4-propylsulfanyl-benzenesulfonamide
Descriptor: 2,3,5,6-tetrakis(fluoranyl)-~{N}-methyl-4-propylsulfanyl-benzenesulfonamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BICINE, ...
Authors:Paketuryte, V, Smirnov, A, Manakova, E, Grazulis, S.
Deposit date:2020-09-18
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure and mechanism of secondary sulfonamide binding to carbonic anhydrases.
Eur.Biophys.J., 50, 2021
7AI8
DownloadVisualize
BU of 7ai8 by Molmil
Structure of Ribonucleotide reductase R2 from Escherichia coli collected by still serial crystallography on a COC membrane at a synchrotron source
Descriptor: FE (III) ION, Ribonucleoside-diphosphate reductase 1 subunit beta
Authors:Aurelius, O, John, J, Martiel, I, Padeste, C, Karpik, A, Huang, C.Y, Hogbom, M, Wang, M, Marsh, M.
Deposit date:2020-09-26
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Versatile microporous polymer-based supports for serial macromolecular crystallography.
Acta Crystallogr D Struct Biol, 77, 2021
6PQI
DownloadVisualize
BU of 6pqi by Molmil
Crystal Structure of Class D Beta-lactamase OXA-48 with Cefotaxime
Descriptor: ACETATE ION, CEFOTAXIME, C3' cleaved, ...
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-07-09
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Basis for Substrate Specificity and Carbapenemase Activity of OXA-48 Class D beta-Lactamase.
Acs Infect Dis., 6, 2020
7AI9
DownloadVisualize
BU of 7ai9 by Molmil
Structure of Ribonucleotide reductase R2 from Escherichia coli collected by rotation serial crystallography on a COC membrane at a synchrotron source
Descriptor: FE (III) ION, Ribonucleoside-diphosphate reductase 1 subunit beta
Authors:Aurelius, O, John, J, Martiel, I, Padeste, C, Karpik, A, Huang, C.Y, Hogbom, M, Wang, M, Marsh, M.
Deposit date:2020-09-26
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Versatile microporous polymer-based supports for serial macromolecular crystallography.
Acta Crystallogr D Struct Biol, 77, 2021
6VYN
DownloadVisualize
BU of 6vyn by Molmil
N-terminal domain of mouse surfactant protein B with bound lipid, wild type
Descriptor: (7Z,19R,22R)-25-amino-22-hydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphapentacos-7-en-19-yl (9Z)-octadec-9-enoate, Pulmonary surfactant-associated protein B
Authors:Rapoport, T.A, Bodnar, N.O.
Deposit date:2020-02-27
Release date:2020-11-25
Last modified:2021-01-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanism of Lamellar Body Formation by Lung Surfactant Protein B.
Mol.Cell, 81, 2021
1TKT
DownloadVisualize
BU of 1tkt by Molmil
CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW426318
Descriptor: 6-CHLORO-4-(CYCLOHEXYLOXY)-3-PROPYLQUINOLIN-2(1H)-ONE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Hopkins, A.L, Ren, J, Stuart, D.I, Stammers, D.K.
Deposit date:2004-06-09
Release date:2004-12-07
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design of non-nucleoside inhibitors of HIV-1 reverse transcriptase with improved drug resistance properties. 1.
J.Med.Chem., 47, 2004
7AGN
DownloadVisualize
BU of 7agn by Molmil
Human carbonic anhydrase II in complex with 4-(2-aminoethylsulfanyl)-2,3,5,6-tetrafluoro-N-methyl-benzenesulfonamide
Descriptor: 4-(2-azanylethylsulfanyl)-2,3,5,6-tetrakis(fluoranyl)-~{N}-methyl-benzenesulfonamide, BICINE, SODIUM ION, ...
Authors:Paketuryte, V, Smirnov, A, Manakova, E, Grazulis, S.
Deposit date:2020-09-23
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structure and mechanism of secondary sulfonamide binding to carbonic anhydrases.
Eur.Biophys.J., 50, 2021
8A2L
DownloadVisualize
BU of 8a2l by Molmil
X-ray structure of TRIL-encapsulated human heavy chain ferritin
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin heavy chain, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2022-06-03
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:A new and efficient procedure to load bioactive molecules within the human heavy-chain ferritin nanocage.
Front Mol Biosci, 10, 2023
8A5N
DownloadVisualize
BU of 8a5n by Molmil
X-ray structure of human H-chain ferritin treated with SDS
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin heavy chain, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2022-06-15
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:A new and efficient procedure to load bioactive molecules within the human heavy-chain ferritin nanocage.
Front Mol Biosci, 10, 2023
5KF1
DownloadVisualize
BU of 5kf1 by Molmil
X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum, apo form, pH 5
Descriptor: 1,2-ETHANEDIOL, ACETYL COENZYME *A, COENZYME A, ...
Authors:Holden, H.M, Thoden, J.B, Dopkins, B.J, tipton, P.A.
Deposit date:2016-06-11
Release date:2016-07-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Studies on a Glucosamine/Glucosaminide N-Acetyltransferase.
Biochemistry, 55, 2016
8A2M
DownloadVisualize
BU of 8a2m by Molmil
X-ray structure of Ru(bpy)3]2+ complex (Ru1)-encapsulated human heavy chain ferritin
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin heavy chain, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2022-06-03
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:A new and efficient procedure to load bioactive molecules within the human heavy-chain ferritin nanocage.
Front Mol Biosci, 10, 2023
2IA8
DownloadVisualize
BU of 2ia8 by Molmil
Kinetic and Crystallographic Studies of a Redesigned Manganese-Binding Site in Cytochrome c Peroxidase
Descriptor: Cytochrome c peroxidase, mitochondrial, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pfister, T, Mirarefi, A.Y, Gengenbach, A.J, Zhao, X, Conaster, C.D.N, Gao, Y.G, Robinson, H, Zukoski, C.F, Wang, A.H.J, Lu, Y.
Deposit date:2006-09-07
Release date:2007-08-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Kinetic and crystallographic studies of a redesigned manganese-binding site in cytochrome c peroxidase
J.Biol.Inorg.Chem., 12, 2007
5CR9
DownloadVisualize
BU of 5cr9 by Molmil
Crystal structure of ABC-type Fe3+-hydroxamate transport system from Saccharomonospora viridis DSM 43017
Descriptor: ABC-type Fe3+-hydroxamate transport system, periplasmic component, GLUTAMIC ACID, ...
Authors:Nocek, B, Cuff, M, Mack, J, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-07-22
Release date:2015-08-12
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of ABC-type Fe3+-hydroxamate transport system from Saccharomonospora viridis DSM 43017
To Be Published

222926

數據於2024-07-24公開中

PDB statisticsPDBj update infoContact PDBjnumon