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PDB: 89346 results

5MKW
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BU of 5mkw by Molmil
Crystal structure of the human ZRANB3 HNH domain
Descriptor: DNA annealing helicase and endonuclease ZRANB3, GLYCEROL, ZINC ION
Authors:Ariza, A.
Deposit date:2016-12-05
Release date:2017-06-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the function of ZRANB3 in replication stress response.
Nat Commun, 8, 2017
6RAI
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BU of 6rai by Molmil
Heterodimeric ABC exporter TmrAB in ATP-bound outward-facing occluded conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Multidrug resistance ABC transporter ATP-binding and permease protein, ...
Authors:Thomas, C, Januliene, D, Mehdipour, A.R, Hofmann, S, Hummer, G, Moeller, A, Tampe, R.
Deposit date:2019-04-06
Release date:2019-07-31
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Conformation space of a heterodimeric ABC exporter under turnover conditions.
Nature, 571, 2019
7RE6
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BU of 7re6 by Molmil
Crystal Structure of the brown dog tick (Rhipicephalus sanguineus) Arginine Kinase in absence of substrate or ligands
Descriptor: Arginine kinase
Authors:Gomez-Yanes, A.C, Garcia-Orozco, K.D, Lopez-Zavala, A.A, Sotelo-Mundo, R.R.
Deposit date:2021-07-12
Release date:2021-11-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The Arginine Kinase from the Tick Rhipicephalus sanguineus Is an Efficient Biocatalyst
Catalysts, 12, 2022
6RAT
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BU of 6rat by Molmil
EFFECTS OF TEMPERATURE ON PROTEIN STRUCTURE AND DYNAMICS: X-RAY CRYSTALLOGRAPHIC STUDIES OF THE PROTEIN RIBONUCLEASE-A AT NINE DIFFERENT TEMPERATURES FROM 98 TO 320 K
Descriptor: RIBONUCLEASE A
Authors:Tilton Jr, R.F, Dewan, J.C, Petsko, G.A, Burley, S.K.
Deposit date:1991-08-13
Release date:1993-07-15
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease-A at nine different temperatures from 98 to 320 K.
Biochemistry, 31, 1992
7RMB
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BU of 7rmb by Molmil
Room temperature X-ray structure of SARS-CoV-2 main protease (Mpro) in complex with HL-3-78
Descriptor: 3C-like proteinase, 6-[4-(4-bromo-3-chlorophenyl)piperazine-1-carbonyl]pyrimidine-2,4(1H,3H)-dione
Authors:Kovalevsky, A, Kneller, D.W, Coates, L.
Deposit date:2021-07-27
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural, Electronic, and Electrostatic Determinants for Inhibitor Binding to Subsites S1 and S2 in SARS-CoV-2 Main Protease.
J.Med.Chem., 64, 2021
8UYI
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BU of 8uyi by Molmil
Structure of ADP-bound and phosphorylated Pediculus humanus (Ph) PINK1 dimer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Serine/threonine-protein kinase Pink1, ...
Authors:Gan, Z.Y, Kirk, N.S, Leis, A, Komander, D.
Deposit date:2023-11-13
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Interaction of PINK1 with nucleotides and kinetin.
Sci Adv, 10, 2024
7RN4
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BU of 7rn4 by Molmil
Room temperature X-ray structure of SARS-CoV-2 main protease (Mpro) in complex with HL-3-69
Descriptor: 3C-like proteinase, 6-[4-(3,4-dichlorophenyl)piperidine-1-carbonyl]pyrimidine-2,4(1H,3H)-dione
Authors:Kovalevsky, A, Kneller, D.W, Coates, L.
Deposit date:2021-07-29
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural, Electronic, and Electrostatic Determinants for Inhibitor Binding to Subsites S1 and S2 in SARS-CoV-2 Main Protease.
J.Med.Chem., 64, 2021
7Z1P
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BU of 7z1p by Molmil
X-ray crystal structure of SLPYL1-E151D mutant
Descriptor: SLPYL1-E151D
Authors:Infantes, L, Albert, A.
Deposit date:2022-02-25
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure-Based Modulation of the Ligand Sensitivity of a Tomato Dimeric Abscisic Acid Receptor Through a Glu to Asp Mutation in the Latch Loop.
Front Plant Sci, 13, 2022
4Z91
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BU of 4z91 by Molmil
ELIC cocrystallized with isofluorane in a desensitized state
Descriptor: (2R)-2-chloro-2-(difluoromethoxy)-1,1,1-trifluoroethane, 1.7.6 3-bromanylpropan-1-amine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Chen, Q, Kinde, M.N, Arjunan, P, Cohen, A, Xu, Y, Tang, P.
Deposit date:2015-04-09
Release date:2015-09-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.3915 Å)
Cite:Direct Pore Binding as a Mechanism for Isoflurane Inhibition of the Pentameric Ligand-gated Ion Channel ELIC.
Sci Rep, 5, 2015
5KX4
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BU of 5kx4 by Molmil
Structure of SALO
Descriptor: 10.7 kDa salivary protein
Authors:Asojo, O.A.
Deposit date:2016-07-20
Release date:2016-07-27
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of SALO, a leishmaniasis vaccine candidate from the sand fly Lutzomyia longipalpis.
PLoS Negl Trop Dis, 11, 2017
8OG8
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BU of 8og8 by Molmil
Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 3
Descriptor: 1,2-ETHANEDIOL, 5-(2-methyl-1-phenyl-propan-2-yl)imidazo[2,1-a]isoquinoline, ACETATE ION, ...
Authors:Schroeder, M, Vulpetti, A, Renatus, M.
Deposit date:2023-03-19
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Discovery of New Binders for DCAF1, an Emerging Ligase Target in the Targeted Protein Degradation Field.
Acs Med.Chem.Lett., 14, 2023
5HPS
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BU of 5hps by Molmil
System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: WWP1 and UbV P1.1
Descriptor: Ubiquitin variant P1.1, WWP1 HECT
Authors:Wu, K.-P, Mercredi, P.Y, Schulman, B.A.
Deposit date:2016-01-20
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes.
Mol.Cell, 62, 2016
8OJS
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BU of 8ojs by Molmil
Crystal structure of the human IgD Fab - structure Fab1
Descriptor: 1,2-ETHANEDIOL, Human IgD Fab heavy chain, Human IgD Fab light chain, ...
Authors:Davies, A.M, Beavil, R.L, McDonnell, J.M.
Deposit date:2023-03-24
Release date:2023-06-14
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structures of the human IgD Fab reveal insights into C H 1 domain diversity.
Mol.Immunol., 159, 2023
1BU5
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BU of 1bu5 by Molmil
X-RAY CRYSTAL STRUCTURE OF THE DESULFOVIBRIO VULGARIS (HILDENBOROUGH) APOFLAVODOXIN-RIBOFLAVIN COMPLEX
Descriptor: PROTEIN (FLAVODOXIN), RIBOFLAVIN, SULFATE ION
Authors:Walsh, M.A, Mccarthy, A, O'Farrell, P.A, Mccardle, P, Cunningham, P.D, Mayhew, S.G, Higgins, T.M.
Deposit date:1998-09-12
Release date:1999-02-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:X-ray crystal structure of the Desulfovibrio vulgaris (Hildenborough) apoflavodoxin-riboflavin complex.
Eur.J.Biochem., 258, 1998
5L7E
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BU of 5l7e by Molmil
MCR IN COMPLEX WITH ligand
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Edman, K, Aagaard, A, Backstrom, S, Xue, Y.
Deposit date:2016-06-03
Release date:2016-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure-Based Drug Design of Mineralocorticoid Receptor Antagonists to Explore Oxosteroid Receptor Selectivity.
ChemMedChem, 12, 2017
6FQM
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BU of 6fqm by Molmil
3.06A COMPLEX OF S.AUREUS GYRASE with imidazopyrazinone T1 AND DNA
Descriptor: 7-[(3~{S})-3-azanylpyrrolidin-1-yl]-5-cyclopropyl-8-fluoranyl-imidazo[1,2-a]quinoxalin-4-one, DNA (5'-D(*GP*AP*GP*AP*GP*TP*AP*T*GP*GP*CP*CP*AP*TP*AP*CP*TP*CP*T)-3'), DNA gyrase subunit A, ...
Authors:Bax, B.D, Germe, T, Basque, E, Maxwell, A.
Deposit date:2018-02-14
Release date:2018-04-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:A new class of antibacterials, the imidazopyrazinones, reveal structural transitions involved in DNA gyrase poisoning and mechanisms of resistance.
Nucleic Acids Res., 46, 2018
6Y9R
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BU of 6y9r by Molmil
Crystal structure of GSK-3b in complex with the 1H-indazole-3-carboxamide inhibitor 2
Descriptor: ACETATE ION, GLYCEROL, Glycogen synthase kinase-3 beta, ...
Authors:Krapp, S, Griessner, A, Blaesse, M, Buonfiglio, R, Ombrato, R.
Deposit date:2020-03-10
Release date:2020-05-20
Last modified:2020-07-08
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Discovery of Novel Imidazopyridine GSK-3 beta Inhibitors Supported by Computational Approaches.
Molecules, 25, 2020
6BP2
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BU of 6bp2 by Molmil
Therapeutic human monoclonal antibody MR191 bound to a marburgvirus glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, Envelope glycoprotein GP2, ...
Authors:King, L.B, Fusco, M.L, Flyak, A.I, Ilinykh, P.A, Huang, K, Gunn, B, Kirchdoerfer, R.N, Hastie, K.M, Sangha, A.K, Meiler, J, Alter, G, Bukreyev, A, Crowe, J.E.J, Saphire, E.O.
Deposit date:2017-11-21
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.172 Å)
Cite:The Marburgvirus-Neutralizing Human Monoclonal Antibody MR191 Targets a Conserved Site to Block Virus Receptor Binding.
Cell Host Microbe, 23, 2018
4TQA
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BU of 4tqa by Molmil
Crystal Structure of a GDP-bound G13D Oncogenic Mutant of Human GTPase KRas
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Hunter, J.C, Manandhar, A, Gurbani, D, Chen, Z, Westover, K.D.
Deposit date:2014-06-10
Release date:2015-06-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Biochemical and Structural Analysis of Common Cancer-Associated KRAS Mutations.
Mol Cancer Res., 13, 2015
5EL7
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BU of 5el7 by Molmil
Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Rozov, A, Demeshkina, N, Khusainov, I, Yusupov, M, Yusupova, G.
Deposit date:2015-11-04
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code.
Nat Commun, 7, 2016
3NL5
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BU of 3nl5 by Molmil
The Crystal Structure of Candida glabrata THI6, a Bifunctional Enzyme involved in Thiamin Biosyhthesis of Eukaryotes
Descriptor: 2-(4-METHYL-THIAZOL-5-YL)-ETHANOL, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Paul, D, Chatterjee, A, Begley, T.P, Ealick, S.E.
Deposit date:2010-06-21
Release date:2010-11-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Domain Organization in Candida glabrata THI6, a Bifunctional Enzyme Required for Thiamin Biosynthesis in Eukaryotes .
Biochemistry, 49, 2010
4ZC3
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BU of 4zc3 by Molmil
DNA binding domain of small terminase SF6 phage
Descriptor: Terminase small subunit
Authors:Antson, A.A, Chechik, M, Jenkins, H.T, Greive, S.J.
Deposit date:2015-04-15
Release date:2015-12-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:DNA recognition for virus assembly through multiple sequence-independent interactions with a helix-turn-helix motif.
Nucleic Acids Res., 44, 2016
5F1V
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BU of 5f1v by Molmil
biomimetic design results in a potent allosteric inhibitor of dihydrodipicolinate synthase from Campylobacter jejuni
Descriptor: (2R,5R)-2,5-diamino-2,5-bis(4-aminobutyl)hexanedioic acid, 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ...
Authors:Conly, C.J.T, Palmer, D.R.J, Sanders, D.A.R.
Deposit date:2015-11-30
Release date:2016-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biomimetic Design Results in a Potent Allosteric Inhibitor of Dihydrodipicolinate Synthase from Campylobacter jejuni.
J.Am.Chem.Soc., 138, 2016
7RBW
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BU of 7rbw by Molmil
Structure of Biliverdin-binding Serpin of Boana punctata (polka-dot tree frog)
Descriptor: BILIVERDINE IX ALPHA, Biliverdin bindin serpin
Authors:Fedorov, E, Manoilov, K.Y, Verkhusha, V, Almo, S.C, Ghosh, A.
Deposit date:2021-07-06
Release date:2021-11-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and Functional Characterization of a Biliverdin-Binding Near-Infrared Fluorescent Protein From the Serpin Superfamily.
J.Mol.Biol., 434, 2021
8OG9
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BU of 8og9 by Molmil
Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 4
Descriptor: 5-[1-(4-chlorophenyl)cyclopropyl]imidazo[2,1-a]isoquinoline, DDB1- and CUL4-associated factor 1
Authors:Schroeder, M, Vulpetti, A, Renatus, M.
Deposit date:2023-03-19
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.945 Å)
Cite:Discovery of New Binders for DCAF1, an Emerging Ligase Target in the Targeted Protein Degradation Field.
Acs Med.Chem.Lett., 14, 2023

225946

數據於2024-10-09公開中

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