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PDB: 89035 results

2G1M
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BU of 2g1m by Molmil
Cellular Oxygen Sensing: Crystal Structure of Hypoxia-Inducible Factor Prolyl Hydroxylase (PHD2)
Descriptor: Egl nine homolog 1, FE (II) ION, N-[(4-HYDROXY-8-IODOISOQUINOLIN-3-YL)CARBONYL]GLYCINE
Authors:Mcdonough, M.A, Schofield, C.J.
Deposit date:2006-02-14
Release date:2006-06-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cellular oxygen sensing: Crystal structure of hypoxia-inducible factor prolyl hydroxylase (PHD2).
Proc.Natl.Acad.Sci.Usa, 103, 2006
4FDM
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BU of 4fdm by Molmil
Crystallization and 3D structure elucidation of thermostable L2 lipase from thermophilic locally isolated Bacillus sp. L2.
Descriptor: CALCIUM ION, Thermostable lipase, ZINC ION
Authors:Rahman, R.N.Z.R.A, Shariff, F.M, Salleh, A.B, Basri, M.B.
Deposit date:2012-05-29
Release date:2013-05-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:3D Structure Elucidation of Thermostable L2 Lipase from Thermophilic Bacillus sp. L2.
Int.J.Mol.Sci., 13, 2012
3KP3
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BU of 3kp3 by Molmil
Staphylococcus epidermidis in complex with ampicillin
Descriptor: (2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, Transcriptional regulator TcaR
Authors:Chang, Y.M, Chen, C.K, Wang, A.H.
Deposit date:2009-11-15
Release date:2010-06-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural study of TcaR and its complexes with multiple antibiotics from Staphylococcus epidermidis.
Proc.Natl.Acad.Sci.USA, 107, 2010
6DDY
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BU of 6ddy by Molmil
Crystal structure of the double mutant (D52N/K359Q) of NT5C2-537X in the active state, Northeast Structural Genomics Target
Descriptor: Cytosolic purine 5'-nucleotidase, GLYCEROL, PHOSPHATE ION
Authors:Forouhar, F, Dieck, C.L, Tzoneva, G, Carpenter, Z, Ambesi-Impiombato, A, Sanchez-Martin, M, Kirschner-Schwabe, R, Lew, S, Seetharaman, J, Ferrando, A.A, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2018-05-10
Release date:2018-07-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Structure and Mechanisms of NT5C2 Mutations Driving Thiopurine Resistance in Relapsed Lymphoblastic Leukemia.
Cancer Cell, 34, 2018
5DQH
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Crystal Structure of Human DNA Polymerase Eta Inserting dGMPNPP Opposite O4-Ethylthymidine
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(5EJ)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Patra, A, OFlaherty, D.K, Egli, M.
Deposit date:2015-09-14
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Lesion Orientation ofO4-Alkylthymidine Influences Replication by Human DNA Polymeraseeta.
Chem Sci, 7, 2016
4FFX
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BU of 4ffx by Molmil
Structural and Biochemical Characterization of Human Adenylosuccinate Lyase (ADSL) and the R303C ADSL Deficiency Associated Mutation
Descriptor: Adenylosuccinate lyase
Authors:Deaton, M.K, Ray, S.P, Capodagli, G.C, Calkins, L.A.F, Sawle, L, Ghosh, K, Patterson, D, Pegan, S.D.
Deposit date:2012-06-01
Release date:2012-08-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Biochemical Characterization of Human Adenylosuccinate Lyase (ADSL) and the R303C ADSL Deficiency-Associated Mutation.
Biochemistry, 51, 2012
4WBG
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BU of 4wbg by Molmil
Crystal structure of class C beta-lactamase Mox-1 covalently complexed with aztorenam
Descriptor: 2-({[(1Z)-1-(2-amino-1,3-thiazol-4-yl)-2-oxo-2-{[(2S,3S)-1-oxo-3-(sulfoamino)butan-2-yl]amino}ethylidene]amino}oxy)-2-methylpropanoic acid, ACETATE ION, Beta-lactamase, ...
Authors:Oguri, T, Shimizu-ibuka, A, Ishii, Y.
Deposit date:2014-09-03
Release date:2015-07-01
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational Change Observed in the Active Site of Class C beta-Lactamase MOX-1 upon Binding to Aztreonam
Antimicrob.Agents Chemother., 59, 2015
2GG8
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BU of 2gg8 by Molmil
Novel bacterial methionine aminopeptidase inhibitors
Descriptor: COBALT (II) ION, METHYL N-[(2S,3R)-3-AMINO-2-HYDROXY-3-(4-METHYLPHENYL)PROPANOYL]-D-ALANYL-D-LEUCINATE, Methionine aminopeptidase, ...
Authors:Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M.
Deposit date:2006-03-23
Release date:2006-06-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors.
Proteins, 66, 2007
2G5H
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BU of 2g5h by Molmil
Structure of tRNA-Dependent Amidotransferase GatCAB
Descriptor: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, Glutamyl-tRNA(Gln) amidotransferase subunit A, ...
Authors:Nakamura, A, Yao, M, Tanaka, I.
Deposit date:2006-02-23
Release date:2006-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ammonia channel couples glutaminase with transamidase reactions in GatCAB
Science, 312, 2006
4FKI
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BU of 4fki by Molmil
Crystal Structure of the Cdk2 in Complex with Aminopyrazole Inhibitor
Descriptor: Cyclin-dependent kinase 2, N-(5-cyclopropyl-1H-pyrazol-3-yl)-2-[4-(trifluoromethoxy)phenyl]acetamide
Authors:Kang, Y.N, Stuckey, J.A.
Deposit date:2012-06-13
Release date:2013-05-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of the Cdk2 in Complex with Aminopyrazole Inhibitor
To be Published
4WAL
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BU of 4wal by Molmil
Crystal structure of selenomethionine Msl5 protein in complex with RNA at 2.2 A
Descriptor: Branchpoint-bridging protein, CHLORIDE ION, GLYCEROL, ...
Authors:Jacewicz, A, Smith, P, Chico, L, Schwer, B, Shuman, S.
Deposit date:2014-08-29
Release date:2014-12-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs.
Rna, 21, 2015
4V70
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BU of 4v70 by Molmil
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Blau, C, Bock, L.V, Schroder, G.F, Davydov, I, Fischer, N, Stark, H, Rodnina, M.V, Vaiana, A.C, Grubmuller, H.
Deposit date:2013-10-14
Release date:2014-07-09
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Energy barriers and driving forces in tRNA translocation through the ribosome.
Nat.Struct.Mol.Biol., 20, 2013
7QZ1
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BU of 7qz1 by Molmil
Formate dehydrogenase from Starkeya novella
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ...
Authors:Pontillo, N, Slotboom, D.J, Guskov, A.
Deposit date:2022-01-30
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biochemical and structural insight into the chemical resistance and cofactor specificity of the formate dehydrogenase from Starkeya novella.
Febs J., 290, 2023
6DLV
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BU of 6dlv by Molmil
Cryo-EM of the GTP-bound human dynamin-1 polymer assembled on the membrane in the super constricted state
Descriptor: Dynamin-1
Authors:Kong, L, Wang, H, Fang, S, Canagarajah, B, Kehr, A.D, Rice, W.J, Hinshaw, J.E.
Deposit date:2018-06-02
Release date:2018-08-01
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (10.1 Å)
Cite:Cryo-EM of the dynamin polymer assembled on lipid membrane.
Nature, 560, 2018
3UIY
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BU of 3uiy by Molmil
Crystal structure of SefD_dscA in H2O
Descriptor: Chimera protein of SefD and SefA
Authors:Garnett, J.A, Wei-chao, L, Liu, B, Matthews, S.J.
Deposit date:2011-11-07
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Promoting crystallisation of the Salmonella enteritidis fimbriae 14 pilin SefD using deuterium oxide.
Biochem.Biophys.Res.Commun., 421, 2012
2GFN
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BU of 2gfn by Molmil
Crystal structure of HTH-type transcriptional regulator pksA related protein from Rhodococcus sp. RHA1
Descriptor: CHLORIDE ION, HTH-type transcriptional regulator pksA related protein
Authors:Nocek, B, Evdokimova, E, Kagan, O, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-03-22
Release date:2006-04-25
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of HTH-type transcriptional regulator pksA related protein from Rhodococcus sp. RHA1
To be Published
3UN1
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BU of 3un1 by Molmil
Crystal structure of an oxidoreductase from Sinorhizobium meliloti 1021
Descriptor: PHOSPHATE ION, Probable oxidoreductase
Authors:Agarwal, R, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-11-15
Release date:2011-11-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of an oxidoreductase from Sinorhizobium meliloti 1021
To be Published
5E11
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BU of 5e11 by Molmil
Second PDZ domain of Ligand of Numb protein X 2 by Laue crystallography (no electric field)
Descriptor: Ligand of Numb protein X 2
Authors:Hekstra, D.R, White, K.I, Socolich, M.A, Henning, R.W, Srajer, V, Ranganathan, R.
Deposit date:2015-09-29
Release date:2016-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Electric-field-stimulated protein mechanics.
Nature, 540, 2016
3UQN
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BU of 3uqn by Molmil
Crystal structure of dihydrodipicolinate synthase from Acinetobacter baumannii complexed with Oxamic acid at 1.9 Angstrom resolution
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, OXAMIC ACID
Authors:Singh, A, Kaushik, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-11-21
Release date:2011-12-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of dihydrodipicolinate synthase from Acinetobacter baumannii complexed with Oxamic acid at 1.9 Angstrom resolution
To be Published
1I90
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BU of 1i90 by Molmil
CARBONIC ANHYDRASE II COMPLEXED WITH AL-8520 2H-THIENO[3,2-E]-1,2-THIAZINE-6-SULFONAMIDE, 4-AMINO-3,4-DIHYDRO-2-(3-METHOXYPROPYL)-, 1,1-DIOXIDE, (R)
Descriptor: 4-AMINO-6-[N-(3-METHOXYLPROPYL)-2H-THIENO[3,2-E][1,2]THIAZINE 1,1-DIOXIDE]-SULFONAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
Authors:Kim, C.-Y, Chang, J.S, Liao, J, May, J.A, Christianson, D.W.
Deposit date:2001-03-16
Release date:2001-03-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural aspects of isozyme selectivity in the binding of inhibitors to carbonic anhydrases II and IV.
J.Med.Chem., 45, 2002
1I9E
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BU of 1i9e by Molmil
TCR DOMAIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYTOTOXIC TCELL VALPHA DOMAIN
Authors:Rudolph, M.G, Huang, M, Teyton, L, Wilson, I.A.
Deposit date:2001-03-19
Release date:2001-12-05
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an isolated V(alpha) domain of the 2C T-cell receptor.
J.Mol.Biol., 314, 2001
8S9V
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BU of 8s9v by Molmil
CRISPR-Cas type III-D effector complex bound to a self-target RNA in the pre-cleavage state
Descriptor: CRISPR RNA, Cas10, Cas7-2x, ...
Authors:Schwartz, E.A, Taylor, D.W.
Deposit date:2023-03-30
Release date:2024-04-24
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:RNA targeting and cleavage by the type III-Dv CRISPR effector complex.
Nat Commun, 15, 2024
7RD2
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BU of 7rd2 by Molmil
Co-crystal structure of Chaetomium glucosidase with compound 2
Descriptor: (2R,3R,4R,5S)-1-{[4-({4-[(2R,6S)-2,6-dimethylmorpholin-4-yl]-2-nitroanilino}methyl)phenyl]methyl}-2-(hydroxymethyl)piperidine-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chaetomium alpha glucosidase, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2021-07-09
Release date:2023-02-22
Last modified:2023-03-01
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structure-Based Design of Potent Iminosugar Inhibitors of Endoplasmic Reticulum alpha-Glucosidase I with Anti-SARS-CoV-2 Activity.
J.Med.Chem., 66, 2023
4UTU
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BU of 4utu by Molmil
Structural and biochemical characterization of the N- acetylmannosamine-6-phosphate 2-epimerase from Clostridium perfringens
Descriptor: CHLORIDE ION, N-ACETYLMANNOSAMINE-6-PHOSPHATE 2-EPIMERASE, N-acetylmannosamine-6-phosphate
Authors:Pelissier, M.C, Sebban-Kreuzer, C, Guerlesquin, F, Brannigan, J.A, Davies, G.J, Bourne, Y, Vincent, F.
Deposit date:2014-07-23
Release date:2014-10-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural and Functional Characterization of the Clostridium Perfringens N-Acetylmannosamine-6-Phosphate 2-Epimerase Essential for the Sialic Acid Salvage Pathway
J.Biol.Chem., 289, 2014
2FZC
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BU of 2fzc by Molmil
The Structure of Wild-Type E. Coli Aspartate Transcarbamoylase in Complex with Novel T State Inhibitors at 2.10 Resolution
Descriptor: Aspartate carbamoyltransferase catalytic chain, Aspartate carbamoyltransferase regulatory chain, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Heng, S, Stieglitz, K.A, Eldo, J, Xia, J, Cardia, J.P, Kantrowitz, E.R.
Deposit date:2006-02-09
Release date:2006-08-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:T-state Inhibitors of E. coli Aspartate Transcarbamoylase that Prevent the Allosteric Transition.
Biochemistry, 45, 2006

224572

數據於2024-09-04公開中

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