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PDB: 89346 results

6Z1J
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BU of 6z1j by Molmil
Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV LSP co-crystallization with spheroidene
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2R)-2-hydroxy-3-(phosphonooxy)propyl (9E)-octadec-9-enoate, BACTERIOCHLOROPHYLL A, ...
Authors:Gabdulkhakov, A.G, Fufina, T.Y, Vasilieva, L.G, Betzel, C, Selikhanov, G.K.
Deposit date:2020-05-13
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center.
Iucrj, 7, 2020
8POP
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BU of 8pop by Molmil
HK97 small terminase in complex with DNA
Descriptor: DNA (31-MER), Terminase small subunit
Authors:Chechik, M, Greive, S.J, Antson, A.A, Jenkins, H.T.
Deposit date:2023-07-05
Release date:2023-08-09
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for DNA recognition by a viral genome-packaging machine.
Proc.Natl.Acad.Sci.USA, 121, 2024
4S27
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BU of 4s27 by Molmil
Crystal structure of Arabidopsis thaliana ThiC with bound aminoimidazole ribonucleotide, 5'-deoxyadenosine, L-methionine, Fe4S4 cluster and Fe
Descriptor: 1,4-BUTANEDIOL, 5'-DEOXYADENOSINE, 5-AMINOIMIDAZOLE RIBONUCLEOTIDE, ...
Authors:Fenwick, M.K, Mehta, A.P, Zhang, Y, Abdelwahed, S, Begley, T.P, Ealick, S.E.
Deposit date:2015-01-19
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Non-canonical active site architecture of the radical SAM thiamin pyrimidine synthase.
Nat Commun, 6
8PQ7
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BU of 8pq7 by Molmil
The Potato Late Blight pathogen (Phytophthora infestans) effector protein Pi04134 in complex with potato protein phosphatase type 1c (PP1c).
Descriptor: 1,2-ETHANEDIOL, MANGANESE (II) ION, RxLR effector protein PexRD24, ...
Authors:Bentham, A.R, Banfield, M.J.
Deposit date:2023-07-10
Release date:2023-07-19
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The WY Domain of an RxLr Effector Drives Interactions with a Host Target Phosphatase to Mimic Host Regulatory Proteins and Promote Phytophthora infestans Infection.
Mol.Plant Microbe Interact., 37, 2024
7ZSX
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BU of 7zsx by Molmil
F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath): CO Complex
Descriptor: CARBON MONOXIDE, Cytochrome c, GLYCEROL, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-09
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
6QJC
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BU of 6qjc by Molmil
Dimethyl disulfide inhibited sulfur oxygenase reductase
Descriptor: FE (III) ION, Sulfur oxygenase/reductase
Authors:Frazao, C, Klezin, A, Poell, U.
Deposit date:2019-01-24
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Multiple sulfane modifications in active-site cysteine thiols of two sulfur oxygenase reductases and analysis of substrate/product channels
To Be Published
4ZK6
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BU of 4zk6 by Molmil
Crystallographic Capture of Quinolinate Synthase (NadA) from Pyrococcus horikoshii in its Substrates and Product-Bound States
Descriptor: ACETATE ION, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
Authors:Esakova, O.A, Grove, T.L, Saunders, A.H, Yennawar, N.H, Booker, S.J.
Deposit date:2015-04-29
Release date:2016-06-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Structure of Quinolinate Synthase from Pyrococcus horikoshii in the Presence of Its Product, Quinolinic Acid.
J.Am.Chem.Soc., 138, 2016
7RGV
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BU of 7rgv by Molmil
Structure of Caulobacter crescentus Suppressor of copper sensitivity protein C
Descriptor: Thioredoxin domain-containing protein
Authors:Petit, G.A, Martin, J.L, Gulbis, J.M.
Deposit date:2021-07-15
Release date:2022-03-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:The suppressor of copper sensitivity protein C from Caulobacter crescentus is a trimeric disulfide isomerase that binds copper(I) with subpicomolar affinity.
Acta Crystallogr D Struct Biol, 78, 2022
6QKB
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BU of 6qkb by Molmil
Crystal structure of the beta-hydroxyaspartate aldolase of Paracoccus denitrificans
Descriptor: D-3-hydroxyaspartate aldolase, MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Zarzycki, J, Schada von Borzyskowski, L, Gilardet, A, Erb, T.J.
Deposit date:2019-01-28
Release date:2019-08-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Marine Proteobacteria metabolize glycolate via the beta-hydroxyaspartate cycle.
Nature, 575, 2019
6TB8
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BU of 6tb8 by Molmil
Dye Type Peroxidase Aa from Streptomyces lividans: spectroscopically-validated ferric state
Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lucic, M, Moreno-Chicano, T.M, Hough, M.A, Dworkowski, F.S.N, Worrall, J.A.R.
Deposit date:2019-11-01
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A subtle structural change in the distal haem pocket has a remarkable effect on tuning hydrogen peroxide reactivity in dye decolourising peroxidases from Streptomyces lividans.
Dalton Trans, 49, 2020
5LTX
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BU of 5ltx by Molmil
LIGAND BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECEPTOR PCTA IN COMPLEX WITH L-MET
Descriptor: ACETATE ION, Chemotaxis protein, FORMIC ACID, ...
Authors:Gavira, J.A, Rico-Gimenez, M, Ortega, A, Conejero-Muriel, M, Zhulin, I, Krell, T.
Deposit date:2016-09-07
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:How Bacterial Chemoreceptors Evolve Novel Ligand Specificities
Mbio, 2020
7ZRX
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BU of 7zrx by Molmil
F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath) Chemically Reduced Ferrous State
Descriptor: Cytochrome c, GLYCEROL, HEME C, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-05
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
3MTN
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BU of 3mtn by Molmil
Usp21 in complex with a ubiquitin-based, USP21-specific inhibitor
Descriptor: CHLORIDE ION, GLYCEROL, UBIQUITIN VARIANT UBV.21.4, ...
Authors:Walker, J.R, Avvakumov, G.V, Xue, S, Li, Y, Ernst, A, Sidhu, S, Weigelt, J, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2010-04-30
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A strategy for modulation of enzymes in the ubiquitin system.
Science, 339, 2013
6QL1
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BU of 6ql1 by Molmil
Crystal structure of chimeric carbonic anhydrase VI with 4-[(4,6-dimethylpyrimidin-2-yl)thio]-2,3,5,6-tetrafluorobenzenesulfonamide
Descriptor: 1,2-ETHANEDIOL, 4-[(4,6-dimethylpyrimidin-2-yl)thio]-2,3,5,6-tetrafluorobenzenesulfonamide, BICINE, ...
Authors:Smirnov, A, Manakova, E, Grazulis, S.
Deposit date:2019-01-31
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Engineered Carbonic Anhydrase VI-Mimic Enzyme Switched the Structure and Affinities of Inhibitors.
Sci Rep, 9, 2019
7ZLM
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BU of 7zlm by Molmil
Crystal structure of SOCS2:ElonginB:ElonginC in complex with compound MN551
Descriptor: Elongin-B, Elongin-C, Suppressor of cytokine signaling 2, ...
Authors:Ramachandran, S, Ciulli, A, Makukhin, N.
Deposit date:2022-04-15
Release date:2023-04-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structure-based design of a phosphotyrosine-masked covalent ligand targeting the E3 ligase SOCS2.
Nat Commun, 14, 2023
7ZSV
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BU of 7zsv by Molmil
F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath) Chemically Reduced Ferrous Form
Descriptor: Cytochrome c, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-09
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
8CJL
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BU of 8cjl by Molmil
Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor TPT-004
Descriptor: 3-ethyl-8-[(2-methyl-5~{H}-imidazo[2,1-b][1,3]thiazol-6-yl)methyl]-7-(oxetan-3-ylmethyl)purine-2,6-dione, FE (III) ION, Tryptophan 5-hydroxylase 1
Authors:Schuetz, A, Mallow, K, Nazare, M, Specker, E, Heinemann, U.
Deposit date:2023-02-13
Release date:2024-01-10
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure-Based Design of Xanthine-Imidazopyridines and -Imidazothiazoles as Highly Potent and In Vivo Efficacious Tryptophan Hydroxylase Inhibitors.
J.Med.Chem., 66, 2023
6FKG
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BU of 6fkg by Molmil
Crystal structure of the M.tuberculosis MbcT-MbcA toxin-antitoxin complex.
Descriptor: GLYCEROL, Rv1989c (MbcT), Rv1990c (MbcA)
Authors:Freire, D.M, Cianci, M, Pogenberg, V, Schneider, T.R, Wilmanns, M, Parret, A.H.A.
Deposit date:2018-01-24
Release date:2019-02-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An NAD+Phosphorylase Toxin Triggers Mycobacterium tuberculosis Cell Death.
Mol.Cell, 73, 2019
6FL3
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BU of 6fl3 by Molmil
Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from A. thaliana in complex with myo-IP5 and ADP
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, Inositol-pentakisphosphate 2-kinase, ...
Authors:Whitfield, H.L, Brearley, C.A, Hemmings, A.M.
Deposit date:2018-01-25
Release date:2018-09-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:A Fluorescent Probe Identifies Active Site Ligands of Inositol Pentakisphosphate 2-Kinase.
J. Med. Chem., 61, 2018
6NB6
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BU of 6nb6 by Molmil
SARS-CoV complex with human neutralizing S230 antibody Fab fragment (state 1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, S230 heavy chain, ...
Authors:Walls, A.C, Xiong, X, Park, Y.J, Tortorici, M.A, Snijder, S, Quispe, J, Cameroni, E, Gopal, R, Mian, D, Lanzavecchia, A, Zambon, M, Rey, F.A, Corti, D, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion.
Cell, 176, 2019
6X1V
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BU of 6x1v by Molmil
Structure of pHis Fab (SC44-8) in complex with pHis mimetic peptide
Descriptor: 1,2-ETHANEDIOL, ACLYana-3-pTza peptide, SC44-8 Heavy chain, ...
Authors:Kalagiri, R, Stanfield, R, Wilson, I.A, Hunter, T.
Deposit date:2020-05-19
Release date:2021-02-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural basis for differential recognition of phosphohistidine-containing peptides by 1-pHis and 3-pHis monoclonal antibodies.
Proc.Natl.Acad.Sci.USA, 118, 2021
6FET
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BU of 6fet by Molmil
Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-1439
Descriptor: 1,2-ETHANEDIOL, 1-(2-{4-[(4aS,8aR)-4-[3,4-bis(difluoromethoxy)phenyl]-1-oxo-1,2,4a,5,8,8a-hexahydrophthalazin-2-yl]piperidin-1-yl}-2-oxoethyl)-4,4-dimethylpiperidine-2,6-dione, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2018-01-03
Release date:2019-04-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:hPDE4D2 structure with inhibitor NPD-1439
To be published
7ZRW
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BU of 7zrw by Molmil
F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath)
Descriptor: Cytochrome c, GLYCEROL, HEME C, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-05
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZS4
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BU of 7zs4 by Molmil
F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath)
Descriptor: Cytochrome c, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-06
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
4ZNJ
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BU of 4znj by Molmil
Thermus Phage P74-26 Large Terminase ATPase domain mutant R139A (I 2 3 space group)
Descriptor: Phage terminase large subunit, SULFATE ION
Authors:Hilbert, B.J, Hayes, J.A, Stone, N.P, Duffy, C.M, Kelch, B.A.
Deposit date:2015-05-04
Release date:2015-07-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.532 Å)
Cite:Structure and mechanism of the ATPase that powers viral genome packaging.
Proc.Natl.Acad.Sci.USA, 112, 2015

225946

数据于2024-10-09公开中

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