Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89346 results

2FSW
DownloadVisualize
BU of 2fsw by Molmil
Crystal Structure of the Putative Transcriptional Regualator, MarR family from Porphyromonas gingivalis W83
Descriptor: PG_0823 protein
Authors:Kim, Y, Quartey, P, Buelt, J, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-01-23
Release date:2006-03-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Transcriptional Regualator, MarR family from Porphyromonas gingivalis W83
To be Published
4USD
DownloadVisualize
BU of 4usd by Molmil
Human STK10 (LOK) with SB-633825
Descriptor: 4-{5-(6-methoxynaphthalen-2-yl)-1-methyl-2-[2-methyl-4-(methylsulfonyl)phenyl]-1H-imidazol-4-yl}pyridine, SERINE/THREONINE-PROTEIN KINASE 10
Authors:Elkins, J.M, Salah, E, Szklarz, M, von Delft, F, Canning, P, Raynor, J, Bountra, C, Edwards, A.M, Knapp, S.
Deposit date:2014-07-07
Release date:2015-07-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Comprehensive Characterization of the Published Kinase Inhibitor Set.
Nat.Biotechnol., 34, 2016
8TKO
DownloadVisualize
BU of 8tko by Molmil
KS-AT core of 6-deoxyerythronolide B synthase (DEBS) Module 3 crosslinked with its translocation ACP partner of Module 2
Descriptor: EryAI, EryAII
Authors:Cogan, D.P, Soohoo, A.M, Chen, M, Brodsky, K.L, Liu, Y, Khosla, C.
Deposit date:2023-07-25
Release date:2024-07-31
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural basis for intermodular communication in assembly-line polyketide biosynthesis.
Nat.Chem.Biol., 2024
8TPX
DownloadVisualize
BU of 8tpx by Molmil
Crosslinked 6-deoxyerythronolide B synthase (DEBS) Module 3 in complex with antibody fragment 1B2: trans-oriented 1B2 and ACP
Descriptor: Antibody Fragment 1B2, Heavy Chain, Light Chain, ...
Authors:Cogan, D.P, Soohoo, A.M, Chen, M, Brodsky, K.L, Liu, Y, Khosla, C.
Deposit date:2023-08-05
Release date:2024-08-07
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for intermodular communication in assembly-line polyketide biosynthesis.
Nat.Chem.Biol., 2024
4USF
DownloadVisualize
BU of 4usf by Molmil
Human SLK with SB-440719
Descriptor: 4-[4-(6-methoxynaphthalen-2-yl)-1H-imidazol-5-yl]pyridine, STE20-LIKE SERINE/THREONINE-PROTEIN KINASE
Authors:Elkins, J.M, Salah, E, Szklarz, M, von Delft, F, Bountra, C, Edwards, A.M, Knapp, S.
Deposit date:2014-07-07
Release date:2015-07-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Comprehensive Characterization of the Published Kinase Inhibitor Set.
Nat.Biotechnol., 34, 2016
8TPW
DownloadVisualize
BU of 8tpw by Molmil
Crosslinked 6-deoxyerythronolide B synthase (DEBS) Module 3 in complex with antibody fragment 1B2: cis-oriented 1B2 and ACP
Descriptor: Antibody Fragment 1B2, Heavy Chain, Light Chain, ...
Authors:Cogan, D.P, Soohoo, A.M, Chen, M, Brodsky, K.L, Liu, Y, Khosla, C.
Deposit date:2023-08-05
Release date:2024-08-07
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structural basis for intermodular communication in assembly-line polyketide biosynthesis.
Nat.Chem.Biol., 2024
4WIW
DownloadVisualize
BU of 4wiw by Molmil
Crystal structure of C-terminal domain of putative chitinase from Desulfitobacterium hafniense DCB-2
Descriptor: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Chang, C, Tesar, C, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-26
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.637 Å)
Cite:Crystal structure of C-terminal domain of putative chitinase from Desulfitobacterium hafniense DCB-2
To Be Published
4WGK
DownloadVisualize
BU of 4wgk by Molmil
Crystal structure of human neutral ceramidase with Zn-bound phosphate
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Airola, M.V, Pulkoski-Gross, M.J, Obeid, L.M, Hannun, Y.A.
Deposit date:2014-09-18
Release date:2015-07-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.582 Å)
Cite:Structural Basis for Ceramide Recognition and Hydrolysis by Human Neutral Ceramidase.
Structure, 23, 2015
5EMZ
DownloadVisualize
BU of 5emz by Molmil
Crystal structure of K48-linked diubiquitin with F45W mutation in the proximal unit
Descriptor: Polyubiquitin-B, SULFATE ION
Authors:Nakasone, M.A, Paukstelis, P.J, Fushman, D.
Deposit date:2015-11-07
Release date:2016-11-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural characterization and practical fluorescence applications of the F45W ubiquitin mutant
To Be Published
2R2A
DownloadVisualize
BU of 2r2a by Molmil
Crystal structure of N-terminal domain of zonular occludens toxin from Neisseria meningitidis
Descriptor: SULFATE ION, Uncharacterized protein
Authors:Osipiuk, J, Patterson, S, Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-08-24
Release date:2007-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of N-terminal domain of zonular occludens toxin from Neisseria meningitidis.
To be Published
4WKB
DownloadVisualize
BU of 4wkb by Molmil
Crystal structure of Vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocysteine nucleosidase (MTAN) complexed with methylthio-DADMe-Immucillin-A
Descriptor: (3R,4S)-1-[(4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)METHYL]-4-[(METHYLSULFANYL)METHYL]PYRROLIDIN-3-OL, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Authors:Cameron, S.A, Thomas, K, Almo, S.C, Schramm, V.L.
Deposit date:2014-10-02
Release date:2015-08-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Active site and remote contributions to catalysis in methylthioadenosine nucleosidases.
Biochemistry, 54, 2015
4WG1
DownloadVisualize
BU of 4wg1 by Molmil
Room temperature crystal structure of lysozyme determined by serial synchrotron crystallography (micro focused beam - crystFEL)
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Coquelle, N, Brewster, A.S, Kapp, U, Shilova, A, Weimhausen, B, Sauter, N.K, Burghammer, M, Colletier, J.P.
Deposit date:2014-09-17
Release date:2015-05-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Raster-scanning serial protein crystallography using micro- and nano-focused synchrotron beams.
Acta Crystallogr.,Sect.D, 71, 2015
4WQF
DownloadVisualize
BU of 4wqf by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Lin, J, Gagnon, M.G, Steitz, T.A.
Deposit date:2014-10-21
Release date:2015-01-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation.
Cell, 160, 2015
4WNT
DownloadVisualize
BU of 4wnt by Molmil
Human Cytochrome P450 2D6 Ajmalicine Complex
Descriptor: Ajmalicine, Cytochrome P450 2D6, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Wang, A, Stout, C.D, Johnson, E.F.
Deposit date:2014-10-14
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding.
J.Biol.Chem., 290, 2015
8UB5
DownloadVisualize
BU of 8ub5 by Molmil
The Apo NanH structure from Clostridium perfringens
Descriptor: 1,2-ETHANEDIOL, ACETYL GROUP, Sialidase
Authors:Medley, B.J, Boraston, A.B.
Deposit date:2023-09-22
Release date:2024-09-04
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A "terminal" case of glycan catabolism: structural and enzymatic characterization of the sialidases of Clostridium perfringens.
J.Biol.Chem., 2024
6U46
DownloadVisualize
BU of 6u46 by Molmil
Solution Structure of a Heat-Resistant Long-Acting Insulin Analog
Descriptor: Insulin
Authors:Yang, Y, Weiss, M.A.
Deposit date:2019-08-23
Release date:2020-08-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution Structure of a Heat-Resistant Long-Acting Insulin Analog
To Be Published
6UJU
DownloadVisualize
BU of 6uju by Molmil
Structure of the HIV-1 gp41 transmembrane domain and cytoplasmic tail (LLP2)
Descriptor: Envelope glycoprotein GP41
Authors:Piai, A, Fu, Q, Cai, Y, Ghantous, F, Xiao, T, Shaik, M.M, Peng, H, Rits-Volloch, S, Liu, Z, Chen, W, Seaman, M.S, Chen, B, Chou, J.J.
Deposit date:2019-10-03
Release date:2020-05-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of transmembrane coupling of the HIV-1 envelope glycoprotein.
Nat Commun, 11, 2020
6L6O
DownloadVisualize
BU of 6l6o by Molmil
Crystal structure of stabilized Rab5a GTPase domain from Leishmania donovani
Descriptor: ACETATE ION, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Arora, A, Zohib, M, Biswal, B.K, Maheshwari, D, Pal, R.K.
Deposit date:2019-10-29
Release date:2020-11-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the GDP-bound GTPase domain of Rab5a from Leishmania donovani.
Acta Crystallogr.,Sect.F, 76, 2020
4WOG
DownloadVisualize
BU of 4wog by Molmil
Crystal Structure of Frutalin from Artocarpus incisa
Descriptor: Frutalin
Authors:Pereira, H.M, Moreira, A.C.O.M, Vieira Neto, A.E, Moreno, F.B.M.B, Lobo, M.D.P, Sousa, F.D, Grangeiro, T.B, Moreira, R.A.
Deposit date:2014-10-15
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.813 Å)
Cite:Crystal Structure of Frutalin from Artocarpus incisa
To Be Published
4WP0
DownloadVisualize
BU of 4wp0 by Molmil
Crystal structure of human kynurenine aminotransferase-I with a C-terminal V5-hexahistidine tag
Descriptor: Kynurenine--oxoglutarate transaminase 1
Authors:Nadvi, N.A, Salam, N.K, Park, J, Akladios, F.N, Kapoor, V, Collyer, C.A, Gorrell, M.D, Church, W.B.
Deposit date:2014-10-17
Release date:2014-11-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human kynurenine aminotransferase-I in a novel space group
To be published
4WKC
DownloadVisualize
BU of 4wkc by Molmil
Crystal structure of Escherichia coli 5'-methylthioadenosine/S-adenosyl homocysteine nucleosidase (MTAN) complexed with butylthio-DADMe-Immucillin-A
Descriptor: (3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-[(butylsulfanyl)methyl]pyrrolidin-3-ol, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, TETRAETHYLENE GLYCOL
Authors:Cameron, S.A, Thomas, K, Almo, S.C, Schramm, V.L.
Deposit date:2014-10-02
Release date:2015-08-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Active site and remote contributions to catalysis in methylthioadenosine nucleosidases.
Biochemistry, 54, 2015
6UTV
DownloadVisualize
BU of 6utv by Molmil
E. coli sigma-S transcription initiation complex with a 6-nt RNA ("Fresh" crystal soaked with CTP, UTP, GTP, and ddATP for 150 seconds)
Descriptor: DIPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Zuo, Y, De, S, Steitz, T.A.
Deposit date:2019-10-30
Release date:2020-08-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structural Insights into Transcription Initiation from De Novo RNA Synthesis to Transitioning into Elongation.
Iscience, 23, 2020
6UUA
DownloadVisualize
BU of 6uua by Molmil
E. coli sigma-S transcription initiation complex with a mismatching CTP ("Fresh" crystal soaked with CTP for 2 hours)
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Zuo, Y, De, S, Steitz, T.A.
Deposit date:2019-10-30
Release date:2020-08-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.002 Å)
Cite:Structural Insights into Transcription Initiation from De Novo RNA Synthesis to Transitioning into Elongation.
Iscience, 23, 2020
6L5W
DownloadVisualize
BU of 6l5w by Molmil
Carbonmonoxy human hemoglobin C in the R quaternary structure at 140 K: Light (2 min)
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
Deposit date:2019-10-24
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VAB
DownloadVisualize
BU of 6vab by Molmil
Mouse retromer sub-structure: VPS35/VPS35 flat dimer
Descriptor: Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35
Authors:Kendall, A.K, Jackson, L.P.
Deposit date:2019-12-17
Release date:2020-02-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Mammalian Retromer Is an Adaptable Scaffold for Cargo Sorting from Endosomes.
Structure, 28, 2020

225946

건을2024-10-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon