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PDB: 89472 results

3CER
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BU of 3cer by Molmil
Crystal structure of the exopolyphosphatase-like protein Q8G5J2. Northeast Structural Genomics Consortium target BlR13
Descriptor: Possible exopolyphosphatase-like protein, SULFATE ION
Authors:Kuzin, A.P, Su, M, Chen, Y, Neely, H, Seetharaman, J, Shastry, R, Fang, Y, Cunningham, K, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-02-29
Release date:2008-04-01
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the exopolyphosphatase-like protein Q8G5J2. Northeast Structural Genomics Consortium target BlR13.
To be Published
1R34
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BU of 1r34 by Molmil
Golgi alpha-mannosidase II complex with 5-thio-D-mannopyranosylamidinium salt
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, N-[(1Z)-2-phenylethanimidoyl]-5-thio-alpha-D-mannopyranosylamine, ...
Authors:Kuntz, D.A, Xin, W, Kavelekar, L.M, Rose, D.R, Pinto, B.M.
Deposit date:2003-09-30
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:5-Thio-d-glycopyranosylamines and their amidinium salts as potential transition-state mimics of glycosyl hydrolases: synthesis, enzyme inhibitory activities, X-ray crystallography, and molecular modeling
TETRAHEDRON ASYMMETRY, 16, 2005
4JW0
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BU of 4jw0 by Molmil
Structure of Gloeobacter violaceus CcmL
Descriptor: Carbon dioxide concentrating mechanism protein, SULFATE ION
Authors:Sutter, M, Kerfeld, C.A.
Deposit date:2013-03-26
Release date:2013-09-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two new high-resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species.
Photosynth.Res., 118, 2013
4BAJ
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BU of 4baj by Molmil
MYCOBACTERIUM TUBERCULOSIS CHORISMATE SYNTHASE after exposure to 266nm UV laser
Descriptor: ACETATE ION, CHORISMATE SYNTHASE
Authors:Pereira, P.J.B, Royant, A, Panjikar, S, de Sanctis, D.
Deposit date:2012-09-14
Release date:2013-04-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:In-house UV radiation-damage-induced phasing of selenomethionine-labeled protein structures.
J. Struct. Biol., 181, 2013
1RRB
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BU of 1rrb by Molmil
THE RAS-BINDING DOMAIN OF RAF-1 FROM RAT, NMR, 1 STRUCTURE
Descriptor: RAF PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE
Authors:Terada, T, Ito, Y, Shirouzu, M, Tateno, M, Hashimoto, K, Kigawa, T, Ebisuzaki, T, Takio, K, Shibata, T, Yokoyama, S, Smith, B.O, Laue, E.D, Cooper, J.A, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1998-03-26
Release date:1999-03-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance and molecular dynamics studies on the interactions of the Ras-binding domain of Raf-1 with wild-type and mutant Ras proteins.
J.Mol.Biol., 286, 1999
2H36
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BU of 2h36 by Molmil
Structure of ORF14 from Sulfolobus Islandicus Filamentous Virus (SIFV)
Descriptor: Hypothetical protein SIFV0014
Authors:Goulet, A, Spinelli, S, Cambillau, C.
Deposit date:2006-05-22
Release date:2007-06-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The crystal structure of ORF14 from Sulfolobus islandicus filamentous virus
Proteins, 76, 2009
2GKP
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BU of 2gkp by Molmil
Protein of Unknown Function NMB0488 from Neisseria meningitidis
Descriptor: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, SODIUM ION, ...
Authors:Osipiuk, J, Volkart, L, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-04-03
Release date:2006-05-02
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:X-ray crystal structure of hypothetical protein NMB0488 from Neisseria meningitidis.
To be Published
4BFG
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BU of 4bfg by Molmil
Structure of the extracellular portion of mouse CD200R
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, AZIDE ION, ...
Authors:Hatherley, D, Lea, S.M, Johnson, S, Barclay, A.N.
Deposit date:2013-03-18
Release date:2013-05-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structures of Cd200/Cd200 Receptor Family and Implications for Topology, Regulation, and Evolution
Structure, 21, 2013
4BKS
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BU of 4bks by Molmil
von Hippel Lindau protein:ElonginB:ElonginC complex, in complex with (2S,4R)-1-ethanoyl-N-[[4-(1,3-oxazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide
Descriptor: (2S,4R)-1-ethanoyl-N-[[4-(1,3-oxazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, ACETATE ION, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, ...
Authors:Van Molle, I, Dias, D.M, Baud, M, Galdeano, C, Geraldes, C.F.G.C, Ciulli, A.
Deposit date:2013-04-29
Release date:2013-11-27
Last modified:2014-01-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Is NMR Fragment Screening Fine-Tuned to Assess Druggability of Protein-Protein Interactions?
Acs Med.Chem.Lett., 5, 2014
4BFI
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BU of 4bfi by Molmil
Structure of the complex of the extracellular portions of mouse CD200R and mouse CD200
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CELL SURFACE GLYCOPROTEIN CD200 RECEPTOR 1, ...
Authors:Hatherley, D, Lea, S.M, Johnson, S, Barclay, A.N.
Deposit date:2013-03-19
Release date:2013-05-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Structures of Cd200/Cd200 Receptor Family and Implications for Topology, Regulation, and Evolution
Structure, 21, 2013
2GQF
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BU of 2gqf by Molmil
Crystal structure of flavoprotein HI0933 from Haemophilus influenzae Rd
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Hypothetical protein HI0933, SULFATE ION
Authors:Mulichak, A.M, Patskovsky, Y, Keefe, L.J, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-04-20
Release date:2006-05-30
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of hypothetical flavoprotein HI0933 from Haemophilus influenzae Rd.
To be Published
3UGE
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BU of 3uge by Molmil
Silver Metallated Pseudomonas aeruginosa Azurin at 1.70 A
Descriptor: Azurin, SILVER ION
Authors:Panzner, M.J, Billinovich, S.M, Parker, J.A, Bladholm, E, Berry, S.M, Ziegler, C.J, Leeper, T.C.
Deposit date:2011-11-02
Release date:2012-11-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Silver Metallation of Pseudomonas aeruginosa Azurin
To be Published
4KJO
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BU of 4kjo by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36A/V66T/V99T at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Caro, J.A, Schlessman, J.L, Garcia-Moreno E, B.
Deposit date:2013-05-03
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cavities in proteins
To be Published
2GS2
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BU of 2gs2 by Molmil
Crystal Structure of the active EGFR kinase domain
Descriptor: Epidermal growth factor receptor
Authors:Zhang, X, Gureasko, J, Shen, K, Cole, P.A, Kuriyan, J.
Deposit date:2006-04-25
Release date:2006-06-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An allosteric mechanism for activation of the kinase domain of epidermal growth factor receptor.
Cell(Cambridge,Mass.), 125, 2006
3UTZ
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BU of 3utz by Molmil
Endogenous-like inhibitory antibodies targeting activated metalloproteinase motifs show therapeutic potential
Descriptor: Metalloproteinase, heavy chain, light chain, ...
Authors:Sela-Passwell, N, Kikkeri, R, Dym, O, Rozenberg, H, Margalit, R, Arad-Yellin, R, Eisenstein, M, Brenner, O, Shoham, T, Danon, T, Shanzer, A, Sagi, I, Israel Structural Proteomics Center (ISPC)
Deposit date:2011-11-27
Release date:2011-12-14
Last modified:2017-03-15
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Antibodies targeting the catalytic zinc complex of activated matrix metalloproteinases show therapeutic potential.
NAT.MED. (N.Y.), 18, 2012
1S6Y
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BU of 1s6y by Molmil
2.3A crystal structure of phospho-beta-glucosidase
Descriptor: 6-phospho-beta-glucosidase
Authors:Tereshko, V, Dementieva, I, Kim, Y, Collat, F, Joachimiak, A, Kossiakoff, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-01-28
Release date:2004-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:2.3A CRYSTAL STRUCTURE OF PHOSPHO-BETA-GLUCOSIDASE, licH Gene Product from BACILLUS STEAROTHERMOPHILUS
To be Published
3UMN
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BU of 3umn by Molmil
Crystal Structure of Lamin-B1
Descriptor: Lamin-B1
Authors:Xu, C, Bian, C.B, Amaya, M.F, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2011-11-14
Release date:2011-11-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the coil 2B fragment and the globular tail domain of human lamin B1.
Febs Lett., 586, 2012
3UCB
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BU of 3ucb by Molmil
Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical Isolate PR20 in Complex with Darunavir
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease
Authors:Agniswamy, J, Chen-Hsiang, S, Aniana, A, Sayer, J.M, Louis, J.M, Weber, I.T.
Deposit date:2011-10-26
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:HIV-1 protease with 20 mutations exhibits extreme resistance to clinical inhibitors through coordinated structural rearrangements.
Biochemistry, 51, 2012
1S4X
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BU of 1s4x by Molmil
NMR Structure of the integrin B3 cytoplasmic domain in DPC micelles
Descriptor: Integrin beta-3
Authors:Vinogradova, O, Vaynberg, J, Kong, X, Haas, T.A, Plow, E.F, Qin, J.
Deposit date:2004-01-19
Release date:2004-03-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Membrane-mediated structural transitions at the cytoplasmic face during integrin activation.
Proc.Natl.Acad.Sci.USA, 101, 2004
4KQF
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BU of 4kqf by Molmil
Crystal structure of CobT E174A complexed with adenine
Descriptor: 1,2-ETHANEDIOL, ADENINE, Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, ...
Authors:Chan, C.H, Newmister, S.A, Taylor, K.C, Claas, K.R, Rayment, I, Escalante-Semerena, J.C.
Deposit date:2013-05-15
Release date:2014-03-12
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dissecting cobamide diversity through structural and functional analyses of the base-activating CobT enzyme of Salmonella enterica.
Biochim.Biophys.Acta, 1840, 2014
1S0Q
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BU of 1s0q by Molmil
Native Bovine Pancreatic Trypsin
Descriptor: CALCIUM ION, Trypsinogen
Authors:Garcia-Granda, S, Chamorro Gavilanes, J.A.
Deposit date:2004-01-02
Release date:2005-01-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Pancratic bovine Trypsin native and inhibited with Benzamidine from synchotron data.
To be Published
2DJ7
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BU of 2dj7 by Molmil
Solution Structure of 3rd LIM Domain of Actin-binding LIM Protein 3
Descriptor: Actin-binding LIM protein 3, ZINC ION
Authors:Niraula, T.N, Sasagawa, A, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-31
Release date:2006-10-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of 3rd LIM Domain of Actin-binding LIM Protein 3
To be Published
2H6X
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BU of 2h6x by Molmil
Crystal Structure of Thioredoxin Wild Type in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Thioredoxin Wild Type in Hexagonal (p61) Space Group
To be Published
2HEU
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BU of 2heu by Molmil
Atomic resolution structure of apo-form of RafE from Streptococcus pneumoniae
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, SODIUM ION, ...
Authors:Paterson, N.G, Riboldi-Tunnicliffe, A, Mitchell, T.J, Isaacs, N.W.
Deposit date:2006-06-22
Release date:2007-06-05
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:High resolution crystal structures of RafE from Streptococcus pneumoniae.
To be Published
2GK4
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BU of 2gk4 by Molmil
The Crystal Structure of the DNA/Pantothenate Metabolism Flavoprotein from Streptococcus pneumoniae
Descriptor: GLYCEROL, conserved hypothetical protein
Authors:Kim, Y, Zhou, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-03-31
Release date:2006-05-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:The Crystal Structure of the DNA/Pantothenate Metabolism Flavoprotein from Streptococcus pneumoniae
To be Published

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