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PDB: 88675 件

7BRZ
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Bovine Pancreatic Trypsin with 2-Methyltryptamine (Room Temperature)
分子名称: 2-(2-methyl-1H-indol-3-yl)ethanamine, CALCIUM ION, Cationic trypsin, ...
著者Maeki, M, Ito, S, Takeda, R, Funakubo, T, Ueno, G, Ishida, A, Tani, H, Yamamoto, M, Tokeshi, M.
登録日2020-03-30
公開日2020-08-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Room-temperature crystallography using a microfluidic protein crystal array device and its application to protein-ligand complex structure analysis.
Chem Sci, 11, 2020
8A43
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Human RNA polymerase I
分子名称: DNA-directed RNA polymerase I subunit RPA1, DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA2, ...
著者Daiss, J.L, Pilsl, M, Straub, K, Bleckmann, A, Hoecherl, M, Heiss, F.B, Abascal-Palacios, G, Ramsay, E, Tluckova, K, Mars, J.C, Fuertges, T, Bruckmann, A, Rudack, T, Bernecky, C, Lamour, V, Panov, K, Vannini, A, Moss, T, Engel, C.
登録日2022-06-10
公開日2022-08-31
最終更新日2022-11-02
実験手法ELECTRON MICROSCOPY (4.09 Å)
主引用文献The human RNA polymerase I structure reveals an HMG-like docking domain specific to metazoans.
Life Sci Alliance, 5, 2022
6FLY
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Structure of AcmJRL, a mannose binding jacalin related lectin from Ananas comosus, in complex with mannose.
分子名称: Jacalin-like lectin, alpha-D-mannopyranose
著者Azarkan, M, Herman, R, El Mahyaoui, R, Sauvage, E, Vanden Broeck, A, Charlier, P.
登録日2018-01-29
公開日2018-08-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.749 Å)
主引用文献Biochemical and structural characterization of a mannose binding jacalin-related lectin with two-sugar binding sites from pineapple (Ananas comosus) stem.
Sci Rep, 8, 2018
6VC0
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Crystal structure of the horse MLKL pseudokinase domain
分子名称: GLYCEROL, Mixed lineage kinase domain like pseudokinase
著者Davies, K.A, Czabotar, P.E.
登録日2019-12-19
公開日2020-07-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.746 Å)
主引用文献Distinct pseudokinase domain conformations underlie divergent activation mechanisms among vertebrate MLKL orthologues.
Nat Commun, 11, 2020
6QU9
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Fab fragment of an antibody that inhibits polymerisation of alpha-1-antitrypsin
分子名称: FAB 4B12 heavy chain, FAB 4B12 light chain, GLYCEROL, ...
著者Jagger, A.M, Heyer-Chauhan, N, Lomas, D.A, Irving, J.A.
登録日2019-02-26
公開日2020-03-18
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structural basis for Z alpha 1 -antitrypsin polymerization in the liver.
Sci Adv, 6, 2020
5KHT
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Crystal structure of the N-terminal fragment of tropomyosin isoform Tpm1.1 at 1.5 A resolution
分子名称: DI(HYDROXYETHYL)ETHER, Tropomyosin alpha-1 chain,General control protein GCN4
著者Kostyukova, A.S, Krieger, I, Yoon, Y.-H, Tolkatchev, D, Samatey, F.A.
登録日2016-06-15
公開日2017-06-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4964 Å)
主引用文献Structural destabilization of tropomyosin induced by the cardiomyopathy-linked mutation R21H.
Protein Sci., 27, 2018
6V9T
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Tudor domain of TDRD3 in complex with a small molecule
分子名称: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, Tudor domain-containing protein 3, UNKNOWN ATOM OR ION
著者Li, W, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2019-12-16
公開日2019-12-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.154 Å)
主引用文献A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
6FN8
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Domain II of the HUMAN COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE at 1.55 A resolution
分子名称: Copper chaperone for superoxide dismutase, ZINC ION
著者Sala, F.A, Wright, G.S.A, Antonyuk, S.V, Garratt, R.C, Hasnain, S.S.
登録日2018-02-02
公開日2019-01-30
最終更新日2019-06-19
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Molecular recognition and maturation of SOD1 by its evolutionarily destabilised cognate chaperone hCCS.
Plos Biol., 17, 2019
5KI4
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Structural impact of single ribonucleotides in DNA
分子名称: DNA (5'-D(*AP*TP*CP*CP*GP*GP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*AP*T)-3')
著者Evich, M, Spring-Connell, A.M, Storici, F.
登録日2016-06-16
公開日2016-08-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Impact of Single Ribonucleotide Residues in DNA.
Chembiochem, 17, 2016
6FNW
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Structure of a volume-regulated anion channel of the LRRC8 family
分子名称: 1,2-ETHANEDIOL, Volume-regulated anion channel subunit LRRC8A
著者Deneka, D, Sawicka, M, Lam, A.K.M, Paulino, C, Dutzler, R.
登録日2018-02-05
公開日2018-05-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of a volume-regulated anion channel of the LRRC8 family.
Nature, 558, 2018
6G2J
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Mouse mitochondrial complex I in the active state
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-DIPHOSPHATE, ...
著者Agip, A.N.A, Blaza, J.N, Bridges, H.R, Viscomi, C, Rawson, S, Muench, S.P, Hirst, J.
登録日2018-03-23
公開日2018-06-06
最終更新日2021-06-02
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures of complex I from mouse heart mitochondria in two biochemically defined states.
Nat. Struct. Mol. Biol., 25, 2018
5JPA
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Hexameric HIV-1 CA H12Y mutant
分子名称: Capsid Protein P24
著者Jacques, D.A, James, L.C.
登録日2016-05-03
公開日2016-08-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献HIV-1 uses dynamic capsid pores to import nucleotides and fuel encapsidated DNA synthesis.
Nature, 536, 2016
6QVY
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The Transcriptional Regulator PrfA-A94V mutant from Listeria Monocytogenes
分子名称: ISOPROPYL ALCOHOL, Listeriolysin regulatory protein, SODIUM ION
著者Hall, M, Grundstrom, C, Hansen, S, Brannstrom, K, Johansson, J, Sauer-Eriksson, A.E.
登録日2019-03-05
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.686 Å)
主引用文献A Novel Growth-Based Selection Strategy Identifies New Constitutively Active Variants of the Major Virulence Regulator PrfA in Listeria monocytogenes.
J.Bacteriol., 202, 2020
6C0R
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Crystal structure of HIV-1 K103N/Y181C mutant reverse transcriptase in complex with non-nucleoside inhibitor 25a
分子名称: 1,2-ETHANEDIOL, 4-({4-[(4-{4-[(E)-2-cyanoethenyl]-2,6-dimethylphenoxy}thieno[3,2-d]pyrimidin-2-yl)amino]piperidin-1-yl}methyl)benzene-1-sulfonamide, DIMETHYL SULFOXIDE, ...
著者Yang, Y, Nguyen, L.A, Smithline, Z.B, Steitz, T.A.
登録日2018-01-02
公開日2018-08-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.049 Å)
主引用文献Structural basis for potent and broad inhibition of HIV-1 RT by thiophene[3,2-d]pyrimidine non-nucleoside inhibitors.
Elife, 7, 2018
5K53
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Crystal structures of aldehyde deformylating oxygenase from Oscillatoria sp. KNUA011
分子名称: FE (III) ION, STEARIC ACID, aldehyde deformylating oxygenase
著者Park, A.K, Kim, H-.W.
登録日2016-05-23
公開日2016-09-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of aldehyde deformylating oxygenase from Limnothrix sp. KNUA012 and Oscillatoria sp. KNUA011.
Biochem.Biophys.Res.Commun., 477, 2016
7ZM9
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BU of 7zm9 by Molmil
Ketosynthase domain 3 of Brevibacillus Brevis orphan BGC11
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Putative polyketide synthase
著者Tittes, Y.U, Herbst, D.A, Jakob, R.P, Maier, T.
登録日2022-04-19
公開日2022-09-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献The structure of a polyketide synthase bimodule core.
Sci Adv, 8, 2022
6FQB
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MurT/GatD peptidoglycan amidotransferase complex from Streptococcus pneumoniae R6
分子名称: Cobyric acid synthase, GLUTAMINE, Mur ligase family protein
著者Morlot, C, Contreras-Martel, C, Leisico, F, Straume, D, Peters, K, Hegnar, O.A, Simon, N, Villard, A.M, Breukink, E, Gravier-Pelletier, C, Le Corre, L, Vollmer, W, Pietrancosta, N, Havarstein, L.S, Zapun, A.
登録日2018-02-13
公開日2018-08-22
最終更新日2018-11-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of the essential peptidoglycan amidotransferase MurT/GatD complex from Streptococcus pneumoniae.
Nat Commun, 9, 2018
4YLU
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X-ray structure of MERS-CoV nsp5 protease bound with a non-covalent inhibitor
分子名称: ACETATE ION, N-{4-[(1H-benzotriazol-1-ylacetyl)(thiophen-3-ylmethyl)amino]phenyl}propanamide, ORF1a protein
著者Tomar, S, Mesecar, A.D.
登録日2015-03-05
公開日2015-06-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Ligand-induced Dimerization of Middle East Respiratory Syndrome (MERS) Coronavirus nsp5 Protease (3CLpro): IMPLICATIONS FOR nsp5 REGULATION AND THE DEVELOPMENT OF ANTIVIRALS.
J.Biol.Chem., 290, 2015
6QMO
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Death-associated Protein Kinase 1 (DAPK1) catalytic and auto-regulatory domains with S289E and S308A mutations
分子名称: CHLORIDE ION, Death-associated protein kinase 1, GLYCEROL, ...
著者Huart, A.-S, Wilmanns, M.
登録日2019-02-07
公開日2019-08-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Molecular mechanisms behind DAPK regulation: how phosphorylation switches work
To Be Published
8UFO
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Crystal Structure of Gastrointestinal HAstV VA1 capsid spike domain at 1.46 A resolution
分子名称: Capsid polyprotein VP90
著者Ghosh, A, DuBois, R.M.
登録日2023-10-04
公開日2024-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Structure and antigenicity of the divergent human astrovirus VA1 capsid spike.
Plos Pathog., 20, 2024
6C27
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SAM-III riboswitch ON-state
分子名称: COBALT HEXAMMINE(III), SAM-III riboswitch
著者Grigg, J.C, Price, I.R, Ke, A.
登録日2018-01-07
公開日2019-01-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.601 Å)
主引用文献Evidence for two-tiered conformation selection in the SAM-III riboswitch
To Be Published
4YBZ
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Ca. Korarchaeum cryptofilum dinucleotide forming Acetyl-coenzyme A synthetase 1 in complex with ADP and with phosphorylated phosphohistidine segment (site I orientation)
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, alpha subunit of Acyl-CoA synthetase (NDP forming), ...
著者Weisse, R.H.-J, Scheidig, A.J.
登録日2015-02-19
公開日2016-01-27
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer.
Proc.Natl.Acad.Sci.USA, 113, 2016
7ZJP
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Optimization of TEAD P-Site Binding Fragment Hit into In Vivo Active Lead MSC-4106
分子名称: 2-methyl-4-[4-(trifluoromethyl)phenyl]pyrazolo[3,4-b]indole-7-carboxylic acid, SULFATE ION, Transcriptional enhancer factor TEF-1
著者Freire, F, Heinrich, T, Petersson, C, Schneider, R, Garg, S, Schwarz, D, Gunera, J, Seshire, A, Koetzner, L, Schlesiger, S, Musil, D, Schilke, H, Doerfel, B, Diehl, P, Boepple, P, Lemos, A.R, Sousa, P.M.F, Freire, F, Bandeiras, T.M, Carswell, E, Pearson, N, Sirohi, S, Hooker, M, Trivier, E, Broome, R, Balsiger, A, Crowden, A, Dillon, C, Wienke, D.
登録日2022-04-11
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Optimization of TEAD P-Site Binding Fragment Hit into In Vivo Active Lead MSC-4106 .
J.Med.Chem., 65, 2022
7TD8
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Integrin alaphIIBbeta3 complex with Tirofiban
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Zhu, J, Lin, F.-Y, Zhu, J, Springer, T.A.
登録日2021-12-30
公開日2022-08-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7BNO
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Open conformation of D614G SARS-CoV-2 spike with 2 Erect RBDs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2021-01-22
公開日2021-02-03
最終更新日2021-03-10
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献The effect of the D614G substitution on the structure of the spike glycoprotein of SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 118, 2021

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