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PDB: 88675 件

5J8H
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Structure of calmodulin in a complex with a peptide derived from a calmodulin-dependent kinase
分子名称: CALCIUM ION, Calmodulin, Eukaryotic elongation factor 2 kinase
著者Alphonse, S, Lee, K, Piserchio, A, Tavares, C.D.J, Giles, D.H, Wellmann, R.M, Dalby, K.N, Ghose, R.
登録日2016-04-07
公開日2016-09-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Basis for the Recognition of Eukaryotic Elongation Factor 2 Kinase by Calmodulin.
Structure, 24, 2016
5MNZ
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Neutron structure of cationic trypsin in its apo form
分子名称: CALCIUM ION, Cationic trypsin
著者Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-01-17
実験手法NEUTRON DIFFRACTION (1.45 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
6XOO
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DCN1 bound to DI-1859
分子名称: Lysozyme, DCN1-like protein 1 chimera, N-{(1S)-1-cyclohexyl-2-[(2-methylpropanoyl)amino]ethyl}-N~2~-propanoyl-3-[6-(propan-2-yl)-1,3-benzothiazol-2-yl]-L-alaninamide
著者Stuckey, J.A.
登録日2020-07-07
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Selective inhibition of cullin 3 neddylation through covalent targeting DCN1 protects mice from acetaminophen-induced liver toxicity.
Nat Commun, 12, 2021
8GJR
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BU of 8gjr by Molmil
Crystal Structure of Nanobody VHH114 Bound to Its Antigen PA14 Cif
分子名称: CFTR inhibitory factor, CITRATE ANION, Nanobody VHH114
著者Simard, A.R, Madden, D.R.
登録日2023-03-16
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of Nanobody VHH114 Bound to Its Antigen PA14 Cif
To Be Published
8OFC
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BU of 8ofc by Molmil
Structure of an i-motif domain with the cytosine analog 1,3-diaza-2-oxophenoxacione (tC) at neutral pH
分子名称: DNA (5'-D(*CP*(YCO)P*GP*TP*TP*CP*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*CP*(DNR)P*GP*T)-3')
著者Mir, B, Serrano-Chacon, I, Terrazas, M, Gandioso, A, Garavis, M, Orozco, M, Escaja, N, Gonzalez, C.
登録日2023-03-15
公開日2024-02-07
最終更新日2024-04-24
実験手法SOLUTION NMR
主引用文献Site-specific incorporation of a fluorescent nucleobase analog enhances i-motif stability and allows monitoring of i-motif folding inside cells.
Nucleic Acids Res., 52, 2024
8OGD
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BU of 8ogd by Molmil
Structure of zinc(II) double mutant human carbonic anhydrase II bound to thiocyanate
分子名称: 4-(HYDROXYMERCURY)BENZOIC ACID, Carbonic anhydrase 2, THIOCYANATE ION, ...
著者Silva, J.M, Cerofolini, L, Carvalho, A.L, Ravera, E, Fragai, M, Parigi, G, Macedo, A.L, Geraldes, C.F.G.C, Luchinat, C.
登録日2023-03-20
公開日2024-02-07
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Elucidating the concentration-dependent effects of thiocyanate binding to carbonic anhydrase.
J.Inorg.Biochem., 244, 2023
6RVM
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BU of 6rvm by Molmil
Cell division protein FtsZ from Staphylococcus aureus, apo form
分子名称: CHLORIDE ION, Cell division protein FtsZ, GLYCEROL, ...
著者Fernandez-Tornero, C, Andreu, J.M, Canosa-Valls, A.J.
登録日2019-05-31
公開日2020-02-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.155 Å)
主引用文献Nucleotide-induced folding of cell division protein FtsZ from Staphylococcus aureus.
Febs J., 287, 2020
7PW1
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Crystal structure of ancestral haloalkane dehalogenase AncLinB-DmbA
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Haloalkane dehalogenase, ...
著者Mazur, A, Grinkevich, P, Prudnikova, T.
登録日2021-10-05
公開日2022-04-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Analysis of the Ancestral Haloalkane Dehalogenase AncLinB-DmbA.
Int J Mol Sci, 22, 2021
6OUE
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Carbonic Anhydrase II complexed with benzene sulfonamide MB11-707A
分子名称: 4-{[(4-hydroxybutyl)carbamoyl]amino}benzene-1-sulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
著者Kota, A, McKenna, R.
登録日2019-05-04
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.415 Å)
主引用文献Carbonic Anhydrase II complexed with ureido benzene sulfonamide MB11-707A
To Be Published
6RW3
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The molecular basis for sugar import in malaria parasites.
分子名称: Hexose transporter 1, alpha-D-glucopyranose, beta-D-glucopyranose
著者Qureshi, A, Matsuoka, R, Brock, J, Drew, D.
登録日2019-06-03
公開日2020-01-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献The molecular basis for sugar import in malaria parasites.
Nature, 578, 2020
6XOL
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BU of 6xol by Molmil
DCN1 bound to DI-1548
分子名称: Lysozyme, DCN1-like protein 1 chimera, N-{(1S)-1-cyclohexyl-2-[(2-methylpropanoyl)amino]ethyl}-N~2~-propanoyl-3-[6-(propan-2-yl)-1,3-benzothiazol-2-yl]-L-alaninamide
著者Stuckey, J.A.
登録日2020-07-07
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Selective inhibition of cullin 3 neddylation through covalent targeting DCN1 protects mice from acetaminophen-induced liver toxicity.
Nat Commun, 12, 2021
8T0O
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BU of 8t0o by Molmil
Fab from mAb RB2AT_87
分子名称: CHLORIDE ION, RB2AT_87 Fab Heavy chain, RB2AT_87 Fab Light chain
著者Kreutzer, A.G, Malonis, R.J, Lai, J.R, Nowick, J.S.
登録日2023-06-01
公開日2024-03-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Generation and Study of Antibodies against Two Triangular Trimers Derived from A beta.
Pept Sci (Hoboken), 116, 2024
7JRR
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BU of 7jrr by Molmil
Crystal structures of artificially designed homomeric RNA nanoarchitectures
分子名称: MAGNESIUM ION, MANGANESE (II) ION, RNA (50-MER)
著者Liu, D, Shao, Y, Piccirilli, J.A, Weizmann, Y.
登録日2020-08-12
公開日2021-09-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structures of artificially designed discrete RNA nanoarchitectures at near-atomic resolution.
Sci Adv, 7, 2021
6F2R
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BU of 6f2r by Molmil
A heterotetramer of human HspB2 and HspB3
分子名称: Heat shock protein beta-2, Heat shock protein beta-3,Heat shock protein beta-3,Heat shock protein beta-3,Heat shock protein beta-3,Heat shock protein beta-2, HspB2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2, ...
著者Clark, A.R, Cole, A.R, Boelens, W.C, Keep, N.H, Slingsby, C.
登録日2017-11-27
公開日2018-07-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Terminal Regions Confer Plasticity to the Tetrameric Assembly of Human HspB2 and HspB3.
J.Mol.Biol., 430, 2018
5MR7
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BU of 5mr7 by Molmil
Crystal structure of the DBD domain of human Grhl2
分子名称: Grainyhead-like protein 2 homolog
著者Schuetz, A, Ming, Q, Roske, Y, Heinemann, U.
登録日2016-12-21
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of gene regulation by the Grainyhead/CP2 transcription factor family.
Nucleic Acids Res., 46, 2018
4XL5
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BU of 4xl5 by Molmil
X-ray structure of bGFP-A / EGFP complex
分子名称: Green fluorescent protein, bGFP-A
著者Chevrel, A, Urvoas, A, Li de la Sierra-Gallay, I, Van Tilbeurgh, H, Minard, P, Valerio-Lepiniec, M.
登録日2015-01-13
公開日2015-08-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Specific GFP-binding artificial proteins ( alpha Rep): a new tool for in vitro to live cell applications.
Biosci.Rep., 35, 2015
7B6I
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BU of 7b6i by Molmil
Crystal structure of MurE from E.coli in complex with Z1373445602
分子名称: 4-(3-fluoranylpyridin-2-yl)-1-methyl-piperazin-2-one, CITRIC ACID, ISOPROPYL ALCOHOL, ...
著者Koekemoer, L, Steindel, M, Fairhead, M, Talon, R, Douangamath, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F, Krojer, T, Structural Genomics Consortium (SGC)
登録日2020-12-07
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.069 Å)
主引用文献Crystal structure of MurE from E.coli
To Be Published
4XVH
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BU of 4xvh by Molmil
Crystal structure of a Corynascus thermopiles (Myceliophthora fergusii) carbohydrate esterase family 2 (CE2) enzyme plus carbohydrate binding domain (CBD)
分子名称: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, Carbohydrate esterase family 2 (CE2), GLYCEROL
著者Stogios, P.J, Dong, A, Xu, X, Cui, H, Savchenko, A.
登録日2015-01-27
公開日2015-02-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9449 Å)
主引用文献Crystal structure of a Corynascus thermopiles carbohydrate esterase family 2 (CE2) enzyme plus carbohydrate binding domain (CBD)
To Be Published
6USF
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BU of 6usf by Molmil
CryoEM structure of human alpha4beta2 nicotinic acetylcholine receptor with varenicline in complex with anti-BRIL synthetic antibody BAK5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab heavy chain, ...
著者Alvarez, F.J.D, Mukherjee, S, Han, S, Ammirati, M, Kossiakoff, A.A.
登録日2019-10-26
公開日2020-04-29
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.87 Å)
主引用文献Synthetic antibodies against BRIL as universal fiducial marks for single-particle cryoEM structure determination of membrane proteins.
Nat Commun, 11, 2020
6UV4
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BU of 6uv4 by Molmil
Crystal structure of the core domain of RNA helicase DDX17 with RNA pri-18a-oligo1
分子名称: 18a_oligo1, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
著者Ngo, T.D, Partin, A.C, Nam, Y.
登録日2019-11-01
公開日2020-01-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献RNA Specificity and Autoregulation of DDX17, a Modulator of MicroRNA Biogenesis.
Cell Rep, 29, 2019
5JDS
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BU of 5jds by Molmil
Crystal structure of PD-L1 complexed with a nanobody at 1.7 Angstron resolution
分子名称: CHLORIDE ION, Nanobody, Programmed cell death 1 ligand 1, ...
著者Zhou, A, Wei, H.
登録日2016-04-17
公開日2017-04-12
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of a novel PD-L1 nanobody for immune checkpoint blockade.
Cell Discov, 3, 2017
4XMM
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BU of 4xmm by Molmil
Structure of the yeast coat nucleoporin complex, space group C2
分子名称: Antibody 57 heavy chain, Antibody 57 light chain, Nucleoporin NUP120, ...
著者Stuwe, T, Correia, A.R, Lin, D.H, Paduch, M, Lu, V.T, Kossiakoff, A.A, Hoelz, A.
登録日2015-01-14
公開日2015-03-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (7.384 Å)
主引用文献Nuclear pores. Architecture of the nuclear pore complex coat.
Science, 347, 2015
6XA3
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Structure of the ligand free P450 monooxygenase TamI
分子名称: PROTOPORPHYRIN IX CONTAINING FE, TamI
著者Newmister, S.A, Srivastava, K.R, Espinoza, R.V, Haatveit, K.C, Khatri, Y, Martini, R.M, Garcia-Borras, M, Podust, L.M, Houk, K.N, Sherman, D.H.
登録日2020-06-03
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Molecular Basis of Iterative C─H Oxidation by TamI, a Multifunctional P450 monooxygenase from the Tirandamycin Biosynthetic Pathway.
Acs Catalysis, 10, 2020
8OGE
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BU of 8oge by Molmil
Structure of cobalt(II) substituted double mutant human carbonic anhydrase II bound to thiocyanate
分子名称: 4-(HYDROXYMERCURY)BENZOIC ACID, COBALT (II) ION, Carbonic anhydrase 2, ...
著者Silva, J.M, Cerofolini, L, Carvalho, A.L, Ravera, E, Fragai, M, Parigi, G, Macedo, A.L, Geraldes, C.F.G.C, Luchinat, C.
登録日2023-03-20
公開日2024-02-07
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Elucidating the concentration-dependent effects of thiocyanate binding to carbonic anhydrase.
J.Inorg.Biochem., 244, 2023
6UV3
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BU of 6uv3 by Molmil
Crystal structure of the core domain of RNA helicase DDX17 with RNA pri-125a-oligo2
分子名称: 125a-oligo2, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
著者Ngo, T.D, Partin, A.C, Nam, Y.
登録日2019-11-01
公開日2020-01-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.597 Å)
主引用文献RNA Specificity and Autoregulation of DDX17, a Modulator of MicroRNA Biogenesis.
Cell Rep, 29, 2019

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件を2024-07-31に公開中

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