Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88675 件

6AWD
DownloadVisualize
BU of 6awd by Molmil
Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A.
登録日2017-09-05
公開日2017-10-18
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (8.1 Å)
主引用文献Structure of RNA polymerase bound to ribosomal 30S subunit.
Elife, 6, 2017
7RNO
DownloadVisualize
BU of 7rno by Molmil
Model of the Ac-6-FP/hpMR1/bB2m/TAPBPR complex from integrated docking, NMR and restrained MD
分子名称: Beta-2-microglobulin, Major histocompatibility complex class I-related gene protein, N-(6-formyl-4-oxo-3,4-dihydropteridin-2-yl)acetamide, ...
著者McShan, A.C, Sgourakis, N.G.
登録日2021-07-29
公開日2022-05-11
最終更新日2022-08-10
実験手法SOLUTION NMR
主引用文献TAPBPR employs a ligand-independent docking mechanism to chaperone MR1 molecules.
Nat.Chem.Biol., 18, 2022
7R4U
DownloadVisualize
BU of 7r4u by Molmil
Apoform of FtrA/P19 from Rubrivivax gelatinosus
分子名称: FtrA-P19, GLYCEROL, SODIUM ION, ...
著者Morera, S, Vigouroux, A, Plancqueel, S.
登録日2022-02-09
公開日2022-05-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
6ED2
DownloadVisualize
BU of 6ed2 by Molmil
Faecalibacterium prausnitzii beta-glucuronidase
分子名称: FORMIC ACID, GLYCEROL, Glycosyl hydrolase family 2, ...
著者Pellock, S.J, Biernat, K.A, Redinbo, M.R.
登録日2018-08-08
公開日2019-02-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases.
Sci Rep, 9, 2019
8GON
DownloadVisualize
BU of 8gon by Molmil
SARS-CoV-2 specific private TCR RLQ7 in complex with RLQ-T1006I-HLA-A2
分子名称: Beta-2-microglobulin, MHC class I antigen, SARS-CoV-2 specific private TCR RLQ7 alpha, ...
著者Wu, D, Mariuzza, R.A.
登録日2022-08-25
公開日2023-03-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Structural insights into protection against a SARS-CoV-2 spike variant by T cell receptor (TCR) diversity.
J.Biol.Chem., 299, 2023
7R3P
DownloadVisualize
BU of 7r3p by Molmil
Apoform of the periplasmic FtrA/P19 protein from Rubrivivax gelatinosus (His-tag)
分子名称: DI(HYDROXYETHYL)ETHER, FtrA-P19 protein, GLYCEROL, ...
著者Morera, S, Vigouroux, A.
登録日2022-02-07
公開日2022-05-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
5L4G
DownloadVisualize
BU of 5l4g by Molmil
The human 26S proteasome at 3.9 A
分子名称: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
著者Schweitzer, A, Aufderheide, A, Rudack, T, Beck, F.
登録日2016-05-25
公開日2016-09-07
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of the human 26S proteasome at a resolution of 3.9 angstrom.
Proc.Natl.Acad.Sci.USA, 113, 2016
6X1T
DownloadVisualize
BU of 6x1t by Molmil
Structure of pHis Fab (SC50-3) in complex with pHis mimetic peptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kalagiri, R, Stanfield, R.L, Wilson, I.A, Hunter, T.
登録日2020-05-19
公開日2021-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural basis for differential recognition of phosphohistidine-containing peptides by 1-pHis and 3-pHis monoclonal antibodies.
Proc.Natl.Acad.Sci.USA, 118, 2021
7R5E
DownloadVisualize
BU of 7r5e by Molmil
FtrA-P19 from Rubrivivax gelatinosus in complex with copper and magnesium (X1)
分子名称: COPPER (II) ION, DI(HYDROXYETHYL)ETHER, FtrA-P19, ...
著者Morera, S, Vigouroux, A.
登録日2022-02-10
公開日2022-05-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
6QF5
DownloadVisualize
BU of 6qf5 by Molmil
X-Ray structure of human Aquaporin 2 crystallized on a silicon chip
分子名称: Aquaporin-2, CADMIUM ION
著者Lieske, J, Cerv, M, Kreida, S, Barthelmess, M, Fischer, P, Pakendorf, T, Yefanov, O, Mariani, V, Seine, T, Ross, B.H, Crosas, E, Lorbeer, O, Burkhardt, A, Lane, T.J, Guenther, S, Bergtholdt, J, Schoen, S, Tornroth-Horsefield, S, Chapman, H.N, Meents, A.
登録日2019-01-09
公開日2019-07-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献On-chip crystallization for serial crystallography experiments and on-chip ligand-binding studies.
Iucrj, 6, 2019
5AKA
DownloadVisualize
BU of 5aka by Molmil
EM structure of ribosome-SRP-FtsY complex in closed state
分子名称: 23S ribosomal RNA, 4.5S ribosomal RNA, 50S RIBOSOMAL PROTEIN L11, ...
著者von Loeffelholz, O, Jiang, Q, Ariosa, A, Karuppasamy, M, Huard, K, Berger, I, Shan, S, Schaffitzel, C.
登録日2015-03-03
公開日2015-03-25
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Ribosome-Srp-Ftsy Cotranslational Targeting Complex in the Closed State.
Proc.Natl.Acad.Sci.USA, 112, 2015
5L6F
DownloadVisualize
BU of 5l6f by Molmil
Xylooligosaccharide oxidase from Myceliophthora thermophila C1 in complex with Xylobiose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Rozeboom, H.J, Ferrari, A.R, Fraaije, M.W.
登録日2016-05-30
公開日2016-09-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery of a Xylooligosaccharide Oxidase from Myceliophthora thermophila C1.
J.Biol.Chem., 291, 2016
7R4Z
DownloadVisualize
BU of 7r4z by Molmil
Strep-tag FtrA-P19 from Rubrivivax gelatinosus in complex with iron and copper
分子名称: COPPER (I) ION, FE (III) ION, FtrA-P19 protein
著者Morera, S, Vigouroux, A.
登録日2022-02-09
公開日2022-05-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
7R5P
DownloadVisualize
BU of 7r5p by Molmil
Strep-tag FtrA-P19 from Rubrivivax gelatinosus in complex with copper and iron
分子名称: 1,2-ETHANEDIOL, COPPER (I) ION, FtrA-P19 protein, ...
著者Morera, S, Vigouroux, A.
登録日2022-02-11
公開日2022-05-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
7R4V
DownloadVisualize
BU of 7r4v by Molmil
Strep-tag FtrA-P19 from Rubrivivax gelatinosus in complex with an endogenous CU1
分子名称: COPPER (I) ION, FtrA-P19
著者Morera, S, Vigouroux, A.
登録日2022-02-09
公開日2022-05-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
6E7M
DownloadVisualize
BU of 6e7m by Molmil
Crystal structure of the holo retinal-bound domain-swapped dimer Q108K:T51D:A28C mutant of human Cellular Retinol Binding Protein II
分子名称: ACETATE ION, GLYCEROL, RETINAL, ...
著者Ghanbarpour, A, Geiger, J.
登録日2018-07-26
公開日2019-10-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches.
J.Am.Chem.Soc., 141, 2019
7R3S
DownloadVisualize
BU of 7r3s by Molmil
FtrA/P19 of Rubrivivax gelatinosus in complex with Ni
分子名称: FtrA-P19 protein, GLYCEROL, NICKEL (II) ION, ...
著者Morera, S, Vigouroux, A.
登録日2022-02-07
公開日2022-05-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
8QUQ
DownloadVisualize
BU of 8quq by Molmil
Crystal structure of Ompk36 GD at 3500 eV based on spherical harmonics absorption corrections
分子名称: OmpK36, SULFATE ION
著者Duman, R, Wagner, A, Beis, K, Wong, J.
登録日2023-10-16
公開日2024-06-19
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Ray-tracing analytical absorption correction for X-ray crystallography based on tomographic reconstructions.
J.Appl.Crystallogr., 57, 2024
7R5G
DownloadVisualize
BU of 7r5g by Molmil
FtrA-P19 from Rubrivivax gelatinosus in complex with copper and magnesium (X2)
分子名称: COPPER (II) ION, DI(HYDROXYETHYL)ETHER, FtrA-P19, ...
著者Morera, S, Vigouroux, A.
登録日2022-02-10
公開日2022-05-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
6QIN
DownloadVisualize
BU of 6qin by Molmil
CRYSTAL STRUCTURE OF THE PMGL2 ESTERASE FROM PERMAFROST METAGENOMIC LIBRARY
分子名称: CHLORIDE ION, MAGNESIUM ION, PMGL2
著者Boyko, K.M, Nikolaeva, A.Y, Korzhenevskiy, D.A, Kryukova, M.V, Petrovskaya, L.E, Novototskaya-Vlasova, K.A, Rivkina, E.M, Dolgikh, D.A, Kirpichnikov, M.P, Popov, V.O.
登録日2019-01-21
公開日2019-12-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of PMGL2 esterase from the hormone-sensitive lipase family with GCSAG motif around the catalytic serine.
Plos One, 15, 2020
8DQF
DownloadVisualize
BU of 8dqf by Molmil
Crystal structure of Neisseria gonorrhoeae carbonic anhydrase with N-(5-sulfamoyl-1,3,4-thiadiazol-2-yl)cyclohexanecarboxamide
分子名称: Carbonic anhydrase, N-(5-sulfamoyl-1,3,4-thiadiazol-2-yl)cyclohexanecarboxamide, SULFATE ION, ...
著者Marapaka, A.K, Das, C, Flaherty, D.P, Yadav, R.
登録日2022-07-19
公開日2022-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Characterization of Thiadiazolesulfonamide Inhibitors Bound to Neisseria gonorrhoeae alpha-Carbonic Anhydrase.
Acs Med.Chem.Lett., 14, 2023
5I2K
DownloadVisualize
BU of 5i2k by Molmil
Structure of the human GluN1/GluN2A LBD in complex with 7-{[ethyl(4-fluorophenyl)amino]methyl}-N,2-dimethyl-5-oxo-5H-[1,3]thiazolo[3,2-a]pyrimidine-3-carboxamide (compound 19)
分子名称: 7-{[ethyl(4-fluorophenyl)amino]methyl}-N,2-dimethyl-5-oxo-5H-[1,3]thiazolo[3,2-a]pyrimidine-3-carboxamide, GLUTAMIC ACID, GLYCINE, ...
著者Wallweber, H.J.A, Lupardus, P.J.
登録日2016-02-09
公開日2016-03-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Discovery of GluN2A-Selective NMDA Receptor Positive Allosteric Modulators (PAMs): Tuning Deactivation Kinetics via Structure-Based Design.
J.Med.Chem., 59, 2016
5L8U
DownloadVisualize
BU of 5l8u by Molmil
Crystal Structure of BAZ2B bromodomain in complex with 3-amino-2-methylpyridine derivative 5
分子名称: Bromodomain adjacent to zinc finger domain protein 2B, TRIETHYLENE GLYCOL, ~{N}-[(1~{S})-1-(3,4-dihydro-2~{H}-1,5-benzodioxepin-7-yl)ethyl]-2-methyl-pyridin-3-amine
著者Lolli, G, Marchand, J.-R, Caflisch, A.
登録日2016-06-08
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Derivatives of 3-Amino-2-methylpyridine as BAZ2B Bromodomain Ligands: In Silico Discovery and in Crystallo Validation.
J. Med. Chem., 59, 2016
5L94
DownloadVisualize
BU of 5l94 by Molmil
The 2.25 A crystal structure of CYP109E1 from Bacillus megaterium in complex with testosterone
分子名称: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, TESTOSTERONE
著者Jozwik, I.K, Thunnissen, A.M.W.H.
登録日2016-06-09
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis of steroid binding and oxidation by the cytochrome P450 CYP109E1 from Bacillus megaterium.
Febs J., 283, 2016
6OBQ
DownloadVisualize
BU of 6obq by Molmil
PP1 H66K in complex with Microcystin LR
分子名称: MANGANESE (II) ION, Microcystin LR, Serine/threonine-protein phosphatase PP1-alpha catalytic subunit
著者Choy, M.S, Moon, T.M, Bray, J.A, Archuleta, T.L, Shi, W, Peti, W, Page, R.
登録日2019-03-21
公開日2019-09-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献SDS22 selectively recognizes and traps metal-deficient inactive PP1.
Proc.Natl.Acad.Sci.USA, 116, 2019

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon