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PDB: 88608 件

1TKH
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Streptomyces griseus aminopeptidase complexed with D-Phenylalanine
分子名称: Aminopeptidase, CALCIUM ION, D-PHENYLALANINE, ...
著者Reiland, V, Gilboa, R, Spungin-Bialik, A, Schomburg, D, Shoham, Y, Blumberg, S, Shoham, G.
登録日2004-06-08
公開日2005-06-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Interactions of D Amino Acids with Streptomyces griseus Aminopeptidase
To be Published
7TF1
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BU of 7tf1 by Molmil
Cryo-EM structure of SARS-CoV-2 Kappa (B.1.617.1) Q484I spike protein (focused refinement of RBD)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Zhu, X, Saville, J.W, Mannar, D, Srivastava, S.S, Berezuk, A.M, Demers, J.P, Zhou, S, Tuttle, K.S, Subramaniam, S.
登録日2022-01-06
公開日2022-03-30
実験手法ELECTRON MICROSCOPY (3.57 Å)
主引用文献Structural and biochemical rationale for enhanced spike protein fitness in delta and kappa SARS-CoV-2 variants.
Nat Commun, 13, 2022
5KHR
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Model of human Anaphase-promoting complex/Cyclosome complex (APC15 deletion mutant) in complex with the E2 UBE2C/UBCH10 poised for ubiquitin ligation to substrate (APC/C-CDC20-substrate-UBE2C)
分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ...
著者VanderLinden, R, Yamaguchi, M, Dube, P, Haselbach, D, Stark, H, Schulman, B.A.
登録日2016-06-15
公開日2016-08-24
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Cryo-EM of Mitotic Checkpoint Complex-Bound APC/C Reveals Reciprocal and Conformational Regulation of Ubiquitin Ligation.
Mol.Cell, 63, 2016
7AG0
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Complex between the bone morphogenetic protein 2 and its antagonist Noggin
分子名称: Bone morphogenetic protein 2, GLYCEROL, Noggin
著者Robert, C, Bruck, F, Herman, R, Vandevenne, M, Filee, P, Kerff, F, Matagne, A.
登録日2020-09-21
公開日2022-04-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.104 Å)
主引用文献Structural analysis of the interaction between human cytokine BMP-2 and the antagonist Noggin reveals molecular details of cell chondrogenesis inhibition.
J.Biol.Chem., 299, 2023
7TF4
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BU of 7tf4 by Molmil
Cryo-EM structure of SARS-CoV-2 Kappa (B.1.617.1) spike protein (focused refinement of RBD)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Zhu, X, Saville, J.W, Mannar, D, Srivastava, S.S, Berezuk, A.M, Demers, J.P, Zhou, S, Tuttle, K.S, Subramaniam, S.
登録日2022-01-06
公開日2022-03-30
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Structural and biochemical rationale for enhanced spike protein fitness in delta and kappa SARS-CoV-2 variants.
Nat Commun, 13, 2022
5JOL
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BU of 5jol by Molmil
Calcium-free EF-hand domain of L-plastin
分子名称: Plastin-2
著者Ishida, H, Jensen, K.V, Woodman, A.G, Hyndman, M.E, Vogel, H.J.
登録日2016-05-02
公開日2017-04-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Calcium-Dependent Switch Helix of L-Plastin Regulates Actin Bundling.
Sci Rep, 7, 2017
7ZTW
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Crystal Structure of Human Parechovirus 1 2A protein
分子名称: ACETATE ION, Protein 2A, SODIUM ION
著者von Castelmur, E, Perrakis, A.
登録日2022-05-11
公開日2023-05-24
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Human Parechovirus 1 2A protein
To Be Published
3EI3
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BU of 3ei3 by Molmil
Structure of the hsDDB1-drDDB2 complex
分子名称: DNA damage-binding protein 1, DNA damage-binding protein 2, TETRAETHYLENE GLYCOL
著者Scrima, A, Thoma, N.H.
登録日2008-09-15
公開日2009-01-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of UV DNA-damage recognition by the DDB1-DDB2 complex.
Cell(Cambridge,Mass.), 135, 2008
6J5C
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BU of 6j5c by Molmil
Louping ill virus envelope protein
分子名称: Envelope protein E
著者Yang, X, Qi, J, Peng, R, Dai, L, Gould, E.A, Tien, P, Gao, G.F.
登録日2019-01-10
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Molecular Basis of a Protective/Neutralizing Monoclonal Antibody Targeting Envelope Proteins of both Tick-Borne Encephalitis Virus and Louping Ill Virus.
J. Virol., 93, 2019
4RHC
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Crystal structure of 3-Dehydroquinate dehydratase from Acinetobacter baumannii at 2.68 A resolution
分子名称: 3-dehydroquinate dehydratase
著者Iqbal, N, Singh, A, Kaur, P, Sharma, S, Singh, T.P.
登録日2014-10-01
公開日2014-10-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Crystal structure of 3-Dehydroquinate dehydratase from Acinetobacter baumannii at 2.68 A resolution
TO BE PUBLISHED
5KO4
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Bromodomain from Trypanosoma brucei Tb427.10.8150
分子名称: Putative uncharacterized protein, SULFATE ION
著者El Bakkouri, M, Walker, J.R, Hou, C.F.D, Lin, Y.H, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Hui, R, Structural Genomics Consortium (SGC)
登録日2016-06-29
公開日2016-08-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Bromodomain from Trypanosoma brucei Tb427.10.8150
To be published
8A2G
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BU of 8a2g by Molmil
Crystal structure of Sebokelevirus 2A2 protein
分子名称: 1,2-ETHANEDIOL, 2A2 protein, TETRAETHYLENE GLYCOL
著者Zhu, L, Von Castelmur, E, Whang, X, Ren, J, Fry, E, Perrakis, A, Stuart, D.I.
登録日2022-06-03
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural plasticity of 2A proteins in the Parechovirus family
to be published
1TM6
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BU of 1tm6 by Molmil
NMR Structure of the Free Zinc Binding C-terminal Domain of SecA
分子名称: Preprotein translocase secA subunit, ZINC ION
著者Matousek, W.M, Alexandrescu, A.T.
登録日2004-06-10
公開日2004-10-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structure of the C-terminal domain of SecA in the free state
Biochim.Biophys.Acta, 1702, 2004
6J9M
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BU of 6j9m by Molmil
NmeBH+AcrIIC2
分子名称: AcrIIC2, CRISPR-associated endonuclease Cas9
著者Zhu, Y.L, Gao, A, Serganov, A, Gao, P.
登録日2019-01-23
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.394 Å)
主引用文献Diverse Mechanisms of CRISPR-Cas9 Inhibition by Type IIC Anti-CRISPR Proteins.
Mol. Cell, 74, 2019
7T1T
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BU of 7t1t by Molmil
JAK2 JH2 IN COMPLEX WITH JAK292
分子名称: (2S)-2-[({4-[(2-amino-7H-pyrrolo[2,3-d]pyrimidin-4-yl)oxy]phenyl}carbamoyl)amino]-4-phenylbutanoic acid, GLYCEROL, Tyrosine-protein kinase JAK2
著者Ippolito, J.A, Henry, S, Krimmer, S.G, Schlessinger, J, Jorgensen, W.L.
登録日2021-12-02
公開日2022-05-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Conversion of a False Virtual Screen Hit into Selective JAK2 JH2 Domain Binders Using Convergent Design Strategies
Acs Med.Chem.Lett., 13, 2022
4R6K
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BU of 4r6k by Molmil
Crystal structure of ABC transporter substrate-binding protein YesO from Bacillus subtilis, TARGET EFI-510761, an open conformation
分子名称: SODIUM ION, SOLUTE-BINDING PROTEIN
著者Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Siedel, R.D, Hillerich, B, Love, J, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-08-25
公開日2014-09-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of transporter Yeso from Bacillus subtilis, Target Efi-510761
To be Published
4RI4
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BU of 4ri4 by Molmil
Crystal structure of PTPN3 (PTPH1) Y676I mutant in complex with vanadate
分子名称: Tyrosine-protein phosphatase non-receptor type 3, VANADATE ION
著者Chen, K.-E, Meng, T.C, Wang, A.H.-J.
登録日2014-10-05
公開日2015-03-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.596 Å)
主引用文献Substrate specificity and plasticity of FERM-containing protein tyrosine phosphatases.
Structure, 23, 2015
6IYL
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BU of 6iyl by Molmil
The structure of EntE with 3-cyanobenzoyl adenylate analog
分子名称: 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex, 5'-O-[(3-cyanobenzene-1-carbonyl)sulfamoyl]adenosine
著者Miyanaga, A, Ishikawa, F.
登録日2018-12-17
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献An Engineered Aryl Acid Adenylation Domain with an Enlarged Substrate Binding Pocket.
Angew.Chem.Int.Ed.Engl., 58, 2019
7TEC
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BU of 7tec by Molmil
Structure of the Listeria monocytogenes GlnR-DNA complex to 3.45 Angstrom
分子名称: DNA (5'-D(*CP*GP*TP*GP*TP*CP*AP*GP*AP*TP*AP*AP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator GlnR
著者Schumacher, M.A, Brennan, R.G.
登録日2022-01-04
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
5KZK
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Crystal Structure of rRNA methyltransferase from Sinorhizobium meliloti
分子名称: COBALT (II) ION, Probable RNA methyltransferase, TrmH family, ...
著者Dey, D, Hegde, R.P, Almo, S.C, Ramakumar, S, Ramagopal, U.A, New York Structural Genomics Research Consortium (NYSGRC)
登録日2016-07-25
公開日2017-08-02
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal Structure of rRNA methyltransferase from Sinorhizobium meliloti
To Be Published
6J90
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BU of 6j90 by Molmil
Crystal Structure of GyraseB N-Terminal Domain complex with ATP from Salmonella Typhi at 2.2A Resolution
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Kaur, G, Sachdeva, E, Tiwari, P, Gupta, D, Ethayathulla, A.S, Kaur, P.
登録日2019-01-21
公開日2020-01-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of GyraseB N-Terminal Domain complex with ATP from Salmonella Typhi at 2.2A Resolution
To Be Published
4RWH
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BU of 4rwh by Molmil
Crystal structure of T cell costimulatory ligand B7-1 (CD80)
分子名称: T-lymphocyte activation antigen CD80
著者Fedorov, A.A, Fedorov, E.V, Samanta, D, Hillerich, B, Seidel, R.D, Almo, S.C.
登録日2014-12-04
公開日2014-12-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Crystal structure of T cell costimulatory ligand B7-1 (CD80)
To be Published
7TAW
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BU of 7taw by Molmil
Cryo-EM structure of the Csy-AcrIF24-promoter DNA dimer
分子名称: AcrIF24, CRISPR type I-F/YPEST-associated protein Csy2, CRISPR type I-F/YPEST-associated protein Csy3, ...
著者Mukherjee, I.A, Chang, L.
登録日2021-12-21
公開日2022-09-21
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural basis of AcrIF24 as an anti-CRISPR protein and transcriptional suppressor.
Nat.Chem.Biol., 18, 2022
4S2U
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Crystal structure of the Phosphorybosylpyrophosphate synthetase from E. Coli
分子名称: MAGNESIUM ION, Ribose-phosphate pyrophosphokinase
著者Timofeev, V.I, Abramchik, Y.A, Muravieva, T.I, Iaroslavtceva, A.K, Stepanenko, V.N, Zhukhlistova, N.E, Esipov, R.S, Kuranova, I.P.
登録日2015-01-23
公開日2016-01-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Crystal structure of the Phosphorybosylpyrophosphate synthetase from E. Coli
To be Published
1TLE
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BU of 1tle by Molmil
LE (LAMININ-TYPE EGF-LIKE) MODULE GIII4 IN SOLUTION AT PH 3.5 AND 290 K, NMR, 14 STRUCTURES
分子名称: LAMININ
著者Baumgartner, R, Czisch, M, Mayer, U, Schl, E.P, Huber, R, Timpl, R, Holak, T.A.
登録日1996-01-26
公開日1997-02-12
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Structure of the nidogen binding LE module of the laminin gamma1 chain in solution.
J.Mol.Biol., 257, 1996

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