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PDB: 89111 件

5KVY
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BU of 5kvy by Molmil
CRYSTAL STRUCTURE OF THE TWO TANDEM RRM DOMAINS OF PUF60 BOUND TO A PORTION OF AN ADML PRE-MRNA 3' SPLICE SITE ANALOG
分子名称: CHLORIDE ION, DNA (30-MER), Poly(U)-binding-splicing factor PUF60
著者Hsiao, H.-H, Crichlow, G.V, Albright, R.A, Murphy, J.W, Lolis, E.J, Braddock, D.T.
登録日2016-07-15
公開日2017-08-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60.
Plos One, 15, 2020
6ETN
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BU of 6etn by Molmil
Atomic resolution structure of RNase A (data collection 4)
分子名称: ISOPROPYL ALCOHOL, Ribonuclease pancreatic
著者Caterino, M, Vergara, A, Merlino, A.
登録日2017-10-27
公開日2018-02-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.92 Å)
主引用文献Raman-markers of X-ray radiation damage of proteins.
Int. J. Biol. Macromol., 111, 2018
8B3L
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BU of 8b3l by Molmil
Hen Egg White Lysozyme 2s in situ crystallization
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Henkel, A, Galchenkova, M, Yefanov, O, Hakanpaeae, J, Chapman, H.N, Oberthuer, D.
登録日2022-09-16
公開日2022-12-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献JINXED: just in time crystallization for easy structure determination of biological macromolecules.
Iucrj, 10, 2023
1KD1
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BU of 1kd1 by Molmil
Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui
分子名称: 23S RRNA, 5S RRNA, CADMIUM ION, ...
著者Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
登録日2001-11-12
公開日2002-07-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
4YD4
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BU of 4yd4 by Molmil
Endothiapepsin in complex with fragment 227
分子名称: 1,2-ETHANEDIOL, 4-(bromomethyl)benzoic acid, BROMIDE ION, ...
著者Stieler, M, Heine, A, Klebe, G.
登録日2015-02-20
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Crystallographic Fragment Screening of an Entire Library
To Be Published
5L76
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BU of 5l76 by Molmil
Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase domain (in apo form)
分子名称: 1,2-ETHANEDIOL, Alpha-aminoadipic semialdehyde synthase, mitochondrial, ...
著者Kopec, J, Pena, I.A, Rembeza, E, Strain-Damerell, C, Chalk, R, Borkowska, O, Goubin, S, Velupillai, S, Burgess-Brown, N, Arrowsmith, C, Edwards, A, Bountra, C, Arruda, P, Yue, W.W.
登録日2016-06-02
公開日2017-05-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase domain (in apo form)
To Be Published
8BC7
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BU of 8bc7 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex an aminoglutarimide degron peptide
分子名称: Cereblon isoform 4, PHE-PHE-GLU-GLN-MET-GLN-QCI, S-Thalidomide, ...
著者Heim, C, Albrecht, R, Spring, A.K, Hartmann, M.D.
登録日2022-10-15
公開日2023-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.719 Å)
主引用文献Identification and structural basis of C-terminal cyclic imides as natural degrons for cereblon.
Biochem.Biophys.Res.Commun., 637, 2022
6VB1
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BU of 6vb1 by Molmil
HLA-B*15:02 complexed with a synthetic peptide
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
著者Schutte, R.J, Li, D, Andring, J, McKenna, R, Ostrov, D.A.
登録日2019-12-18
公開日2020-11-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献HLA-B*15:02 complexed with a synthetic peptide
To Be Published
8F1U
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BU of 8f1u by Molmil
Structure of a 24mer DegP cage bound to the client protein hTRF1
分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1
著者Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E.
登録日2022-11-06
公開日2022-11-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (13.8 Å)
主引用文献Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP.
J.Am.Chem.Soc., 145, 2023
6HK6
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BU of 6hk6 by Molmil
Human RIOK2 bound to inhibitor
分子名称: 1,2-ETHANEDIOL, 2-naphthalen-2-yl-~{N}-pyridin-2-yl-ethanamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Wang, J, Krojer, T, Bountra, C, Edwards, A.M, Arrowsmith, C, Knapp, S, Elkins, J.M.
登録日2018-09-05
公開日2018-10-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of human RIOK2 bound to a specific inhibitor.
Open Biology, 9, 2019
4TKX
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BU of 4tkx by Molmil
Structure of Protease
分子名称: 1,2-ETHANEDIOL, ACETATE ION, LEAD (II) ION, ...
著者Gorman, M.A, Parker, M.W.
登録日2014-05-28
公開日2014-12-31
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the lysine specific protease Kgp from Porphyromonas gingivalis, a target for improved oral health.
Protein Sci., 24, 2015
5L7K
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BU of 5l7k by Molmil
The crystal structure of myristoylated NPHP3 peptide in complex with UNC119a
分子名称: GLY-THR-ALA-SER-SER-LEU, MYRISTIC ACID, Protein unc-119 homolog A
著者Fansa, E.K, Jaiswal, M, Wittinghofer, A.
登録日2016-06-03
公開日2016-08-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Novel Biochemical and Structural Insights into the Interaction of Myristoylated Cargo with Unc119 Protein and Their Release by Arl2/3.
J.Biol.Chem., 291, 2016
5KXT
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BU of 5kxt by Molmil
Hen Egg White Lysozyme at 278K, Data set 5
分子名称: Lysozyme C, SODIUM ION
著者Russi, S, Gonzalez, A, Kenner, L.R, Keedy, D.A, Fraser, J.S, van den Bedem, H.
登録日2016-07-20
公開日2016-09-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Conformational variation of proteins at room temperature is not dominated by radiation damage.
J Synchrotron Radiat, 24, 2017
5ADO
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BU of 5ado by Molmil
Crystal structure of the paraoxon-modified A.17 antibody FAB fragment - Light chain S35R mutant
分子名称: DIETHYL PHOSPHONATE, FAB A.17
著者Chatziefthimiou, S.D, Smirnov, I.V, Golovin, A.V, Stepanova, A.V, Peng, Y, Zolotareva, O.I, Belogurov, A.A, Ponomarenko, N.A, Blackburn, G.M, Gabibov, A.A, Lerner, R, Wilmanns, M.
登録日2015-08-21
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Robotic Qm/Mm-Driven Maturation of Antibody Combining Sites.
Sci.Adv., 2, 2016
6EUR
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BU of 6eur by Molmil
Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/alpha-ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, GLYCEROL, ...
著者Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K.
登録日2017-10-31
公開日2018-11-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
5L88
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BU of 5l88 by Molmil
AFAMIN ANTIBODY FRAGMENT, N14 FAB, L1- GLYCOSILATED, CRYSTAL FORM I, non-parsimonious model
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, Anti-afamin antibody N14, Fab fragment, ...
著者Rupp, B, Naschberger, A.
登録日2016-06-07
公開日2016-08-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献The N14 anti-afamin antibody Fab: a rare VL1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling.
Acta Crystallogr D Struct Biol, 72, 2016
6B7Z
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BU of 6b7z by Molmil
Cryo-EM structure of human insulin degrading enzyme in complex with FAB H11 heavy chain and FAB H11 light chain
分子名称: FAB H11 heavy chain, FAB H11 light chain, Insulin-degrading enzyme
著者Liang, W.G, Zhang, Z, Bailey, L.J, Kossiakoff, A.A, Tan, Y.Z, Wei, H, Carragher, B, Potter, S.C, Tang, W.J.
登録日2017-10-05
公開日2018-01-10
最終更新日2021-04-28
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Ensemble cryoEM elucidates the mechanism of insulin capture and degradation by human insulin degrading enzyme.
Elife, 7, 2018
5NAL
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BU of 5nal by Molmil
The crystal structure of inhibitor-15 covalently bound to PDE6D
分子名称: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, ~{N}4-[(4-chlorophenyl)methyl]-~{N}1-(cyclohexylmethyl)-~{N}4-cyclopentyl-~{N}1-[(~{Z})-4-[(~{E})-methyliminomethyl]-5-oxidanyl-hex-4-enyl]benzene-1,4-disulfonamide
著者Fansa, E.K, Martin-Gago, P, Waldmann, H, Wittinghofer, A.
登録日2017-02-28
公開日2017-05-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Covalent Protein Labeling at Glutamic Acids.
Cell Chem Biol, 24, 2017
6M96
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BU of 6m96 by Molmil
ATP-bound conformation of the WzmWzt O antigen ABC transporter
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, ABC transporter, ...
著者Caffalette, C.A, Zimmer, J.
登録日2018-08-22
公開日2019-03-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献A lipid gating mechanism for the channel-forming O antigen ABC transporter.
Nat Commun, 10, 2019
8FX4
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BU of 8fx4 by Molmil
GC-C-Hsp90-Cdc37 regulatory complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Guanylyl cyclase C, Heat shock protein HSP 90-beta, ...
著者Caveney, N.A, Garcia, K.C.
登録日2023-01-23
公開日2023-07-12
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insight into guanylyl cyclase receptor hijacking of the kinase-Hsp90 regulatory mechanism.
Elife, 12, 2023
8V47
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BU of 8v47 by Molmil
CryoEM structure of AriA-AriB complex (Form II)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, AriA antitoxin, AriB
著者Deep, A, Corbett, K.D.
登録日2023-11-28
公開日2024-06-26
最終更新日2024-08-28
実験手法ELECTRON MICROSCOPY (4.08 Å)
主引用文献Architecture and activation mechanism of the bacterial PARIS defence system.
Nature, 2024
8V46
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BU of 8v46 by Molmil
CryoEM structure of AriA-AriB complex (Form I)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, AriA antitoxin, AriB, ...
著者Deep, A, Corbett, K.D.
登録日2023-11-28
公開日2024-06-26
最終更新日2024-08-28
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Architecture and activation mechanism of the bacterial PARIS defence system.
Nature, 2024
6FC4
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BU of 6fc4 by Molmil
The X-ray Structure of Lytic Transglycosylase Slt inactive mutant E503Q from Pseudomonas aeruginosa
分子名称: GLYCEROL, Soluble lytic murein transglycosylase
著者Batuecas, M.T, Dominguez-Gil, T, Hermoso, J.A.
登録日2017-12-20
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Exolytic and endolytic turnover of peptidoglycan by lytic transglycosylase Slt ofPseudomonas aeruginosa.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6B9R
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BU of 6b9r by Molmil
Streptomyces albus HEPD with substrate 2-hydroxyethylphosphonate (2-HEP) and Fe(II) bound
分子名称: (2-hydroxyethyl)phosphonic acid, FE (III) ION, GLYCEROL, ...
著者Born, D.A, Drennan, C.L.
登録日2017-10-11
公開日2017-12-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Structural basis for methylphosphonate biosynthesis.
Science, 358, 2017
7JIW
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BU of 7jiw by Molmil
The crystal structure of Papain-Like Protease of SARS CoV-2 in complex with PLP_Snyder530 inhibitor
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-(acryloylamino)-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]benzamide, CHLORIDE ION, ...
著者Osipiuk, J, Tesar, C, Endres, M, Lisnyak, V, Maki, S, Taylor, C, Zhang, Y, Zhou, Z, Azizi, S.A, Jones, K, Kathayat, R, Snyder, S.A, Dickinson, B.C, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-07-23
公開日2020-08-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of papain-like protease from SARS-CoV-2 and its complexes with non-covalent inhibitors.
Nat Commun, 12, 2021

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件を2024-09-11に公開中

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