Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88608 件

6P93
DownloadVisualize
BU of 6p93 by Molmil
Human APE1 K98A AP-endonuclease product complex
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Whitaker, A.W, Stark, W.J, Freudenthal, B.D.
登録日2019-06-09
公開日2020-01-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Functions of the major abasic endonuclease (APE1) in cell viability and genotoxin resistance.
Mutagenesis, 35, 2020
7AHR
DownloadVisualize
BU of 7ahr by Molmil
Enzyme of biosynthetic pathway
分子名称: 3-[(1-Carboxyvinyl)oxy]benzoic acid, Chorismate dehydratase, GLYCEROL
著者Archna, A, Breithaupt, C, Stubbs, M.T.
登録日2020-09-25
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Mechanism of chorismate dehydratase MqnA, the first enzyme of the futalosine pathway, proceeds via substrate-assisted catalysis
J.Biol.Chem., 2022
1SZE
DownloadVisualize
BU of 1sze by Molmil
L230A mutant flavocytochrome b2 with benzoylformate
分子名称: BENZOYL-FORMIC ACID, Cytochrome b2, mitochondrial, ...
著者Mowat, C.G, Wehenkel, A, Green, A.J, Walkinshaw, M.D, Reid, G.A, Chapman, S.K.
登録日2004-04-05
公開日2004-07-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Altered Substrate Specificity in Flavocytochrome b(2): Structural Insights into the Mechanism of l-Lactate Dehydrogenation
Biochemistry, 43, 2004
5KDO
DownloadVisualize
BU of 5kdo by Molmil
Heterotrimeric complex of the 4 alanine insertion variant of the Gi alpha1 subunit and the Gbeta1-Ggamma1
分子名称: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(T) subunit gamma-T1, ...
著者Kaya, A.I, Lokits, A.D, Gilbert, J, Iverson, T.M, Meiler, J, Hamm, H.E.
登録日2016-06-08
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Conserved Hydrophobic Core in G alpha i1 Regulates G Protein Activation and Release from Activated Receptor.
J.Biol.Chem., 291, 2016
3E2C
DownloadVisualize
BU of 3e2c by Molmil
Escherichia coli Bacterioferritin Mutant E128R/E135R
分子名称: 1,2-ETHANEDIOL, Bacterioferritin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Wong, S.G, Tom-Yew, S.A.L, Lewin, A, Le Brun, N.E, Moore, G.R, Murphy, M.E.P, Mauk, A.G.
登録日2008-08-05
公開日2009-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and Mechanistic Studies of a Stabilized Subunit Dimer Variant of Escherichia coli Bacterioferritin Identify Residues Required for Core Formation.
J.Biol.Chem., 284, 2009
5JOZ
DownloadVisualize
BU of 5joz by Molmil
Bacteroides ovatus Xyloglucan PUL GH43B
分子名称: CALCIUM ION, Non-reducing end alpha-L-arabinofuranosidase BoGH43B
著者Hemsworth, G.R, Thompson, A.J, Stepper, J, Sobala, L.F, Coyle, T, Larsbrink, J, Spadiut, O, Stubbs, K.A, Brumer, H, Davies, G.J.
登録日2016-05-03
公開日2016-08-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural dissection of a complex Bacteroides ovatus gene locus conferring xyloglucan metabolism in the human gut.
Open Biology, 6, 2016
1T9D
DownloadVisualize
BU of 1t9d by Molmil
Crystal Structure Of Yeast Acetohydroxyacid Synthase In Complex With A Sulfonylurea Herbicide, Metsulfuron methyl
分子名称: 2,5-DIMETHYL-PYRIMIDIN-4-YLAMINE, Acetolactate synthase, mitochondrial, ...
著者McCourt, J.A, Pang, S.S, Guddat, L.W, Duggleby, R.G.
登録日2004-05-16
公開日2004-12-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Elucidating the specificity of binding of sulfonylurea herbicides to acetohydroxyacid synthase.
Biochemistry, 44, 2005
1JGX
DownloadVisualize
BU of 1jgx by Molmil
Photosynthetic Reaction Center Mutant With Thr M 21 Replaced With Asp
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
著者Camara-Artigas, A, Magee, C.L, Williams, J.C, Allen, J.P.
登録日2001-06-27
公開日2001-09-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Individual interactions influence the crystalline order for membrane proteins.
Acta Crystallogr.,Sect.D, 57, 2001
8A3X
DownloadVisualize
BU of 8a3x by Molmil
Imine Reductase from Ensifer adhaerens in complex with NADP+
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NAD_binding_2 domain-containing protein, POTASSIUM ION
著者Gilio, A.K, Grogan, G.
登録日2022-06-09
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献A Reductive Aminase Switches to Imine Reductase Mode for a Bulky Amine Substrate.
Acs Catalysis, 13, 2023
8A82
DownloadVisualize
BU of 8a82 by Molmil
Fe(II)/aKG-dependent halogenase OocPQ
分子名称: Cupin_8 domain-containing protein, FE (III) ION, GLYCEROL, ...
著者Fraley, A.E, Meoded, R.A, Schmalhofer, M, Bergande, C, Groll, M, Piel, J.
登録日2022-06-21
公開日2023-03-08
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Heterocomplex structure of a polyketide synthase component involved in modular backbone halogenation.
Structure, 31, 2023
2I59
DownloadVisualize
BU of 2i59 by Molmil
Solution structure of RGS10
分子名称: Regulator of G-protein signaling 10
著者Fedorov, O, Higman, V.A, Diehl, A, Leidert, M, Lemak, A, Schmieder, P, Oschkinat, H, Elkins, J, Soundarajan, M, Doyle, D.A, Arrowsmith, C, Sundstrom, M, Weigelt, J, Edwards, A, Ball, L.J, Structural Genomics Consortium (SGC)
登録日2006-08-24
公開日2006-10-31
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Structural diversity in the RGS domain and its interaction with heterotrimeric G protein alpha-subunits.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2W0I
DownloadVisualize
BU of 2w0i by Molmil
Structure Of C-Terminal Actin Depolymerizing Factor Homology (Adf-H) Domain Of Human Twinfilin-2
分子名称: TWINFILIN-2
著者Elkins, J.M, Pike, A.C.W, Salah, E, Savitsky, P, Murray, J.W, Roos, A, von Delft, F, Edwards, A, Arrowsmith, C.H, Wikstrom, M, Bountra, C, Knapp, S.
登録日2008-08-18
公開日2008-09-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of C-Terminal Actin Depolymerizing Factor Homology (Adf-H) Domain of Human Twinfilin- 2
To be Published
7T3D
DownloadVisualize
BU of 7t3d by Molmil
CryoEM map of anchor 222-1C06 Fab and lateral patch 2B05 Fab binding H1 HA
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 222-1C06 mAb heavy chain, ...
著者Han, J, Ward, A.B.
登録日2021-12-07
公開日2022-01-12
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Broadly neutralizing antibodies target a haemagglutinin anchor epitope.
Nature, 602, 2022
2VOW
DownloadVisualize
BU of 2vow by Molmil
An oxidized tryptophan facilitates copper-binding in Methylococcus capsulatus secreted protein MopE. The structure of recombinant MopE to 1.65AA
分子名称: CALCIUM ION, GLYCEROL, SURFACE-ASSOCIATED PROTEIN
著者Helland, R, Fjellbirkeland, A, Karlsen, O.A, Ve, T, Lillehaug, J.R, Jensen, H.B.
登録日2008-02-22
公開日2008-03-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献An Oxidized Tryptophan Facilitates Copper Binding in Methylococcus Capsulatus-Secreted Protein Mope.
J.Biol.Chem., 283, 2008
3E8D
DownloadVisualize
BU of 3e8d by Molmil
Crystal structures of the kinase domain of AKT2 in complex with ATP-competitive inhibitors
分子名称: 4-[2-(4-amino-2,5-dihydro-1,2,5-oxadiazol-3-yl)-6-{[(1S)-3-amino-1-phenylpropyl]oxy}-1-ethyl-1H-imidazo[4,5-c]pyridin-4-yl]-2-methylbut-3-yn-2-ol, Glycogen synthase kinase-3 beta peptide, RAC-beta serine/threonine-protein kinase
著者Concha, N.O, Elkins, P.A, Smallwood, A, Ward, P.
登録日2008-08-19
公開日2008-10-14
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Aminofurazans as potent inhibitors of AKT kinase
Bioorg.Med.Chem.Lett., 19, 2009
6PH3
DownloadVisualize
BU of 6ph3 by Molmil
LOV-PAS construct from the LOV-HK sensory protein from Brucella abortus (dark-adapted, construct 15-273)
分子名称: Blue-light-activated histidine kinase, FLAVIN MONONUCLEOTIDE
著者Rinaldi, J, Otero, L.H, Fernandez, I, Goldbaum, F.A, Shin, H, Yang, X, Klinke, S.
登録日2019-06-25
公開日2020-12-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Dimer Asymmetry and Light Activation Mechanism in Brucella Blue-Light Sensor Histidine Kinase.
Mbio, 12, 2021
8A5Z
DownloadVisualize
BU of 8a5z by Molmil
Imine Reductase from Ensifer adhaerens A208N mutant in complex with NADP+
分子名称: IODIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NAD_binding_2 domain-containing protein
著者Gilio, A.K, Grogan, G.
登録日2022-06-16
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献A Reductive Aminase Switches to Imine Reductase Mode for a Bulky Amine Substrate.
Acs Catalysis, 13, 2023
5JZD
DownloadVisualize
BU of 5jzd by Molmil
A re-refinement of the isochorismate synthase EntC
分子名称: (5S,6S)-5-[(1-carboxyethenyl)oxy]-6-hydroxycyclohexa-1,3-diene-1-carboxylic acid, Isochorismate synthase EntC, MAGNESIUM ION
著者Meneely, K.M, Lamb, A.L.
登録日2016-05-16
公開日2016-07-20
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献An Open and Shut Case: The Interaction of Magnesium with MST Enzymes.
J.Am.Chem.Soc., 138, 2016
3WZ2
DownloadVisualize
BU of 3wz2 by Molmil
Crystal structure of Pyrococcus furiosus PbaA, an archaeal homolog of proteasome-assembly chaperone
分子名称: Uncharacterized protein
著者Sikdar, A, Satoh, T, Kawasaki, M, Kato, K.
登録日2014-09-18
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of archaeal homolog of proteasome-assembly chaperone PbaA
Biochem.Biophys.Res.Commun., 453, 2014
5DG6
DownloadVisualize
BU of 5dg6 by Molmil
2.35A resolution structure of Norovirus 3CL protease in complex an oxadiazole-based, cell permeable macrocyclic (21-mer) inhibitor
分子名称: 3C-LIKE PROTEASE, CHLORIDE ION, tert-butyl [(4S,7S,10S)-7-(cyclohexylmethyl)-10-(hydroxymethyl)-5,8,13-trioxo-23-oxa-6,9,14,21,22-pentaazabicyclo[18.2.1]tricosa-1(22),20-dien-4-yl]carbamate
著者Lovell, S, Battaile, K.P, Mehzabeen, N, Damalanka, V.C, Kim, Y, Alliston, K.R, Weerawarna, P.M, Kankanamalage, A.C.G, Lushington, G.H, Chang, K.-O, Groutas, W.C.
登録日2015-08-27
公開日2016-02-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Oxadiazole-Based Cell Permeable Macrocyclic Transition State Inhibitors of Norovirus 3CL Protease.
J.Med.Chem., 59, 2016
6PFO
DownloadVisualize
BU of 6pfo by Molmil
Crystal structure of N-glycosylated human calcitonin receptor extracellular domain in complex with salmon calcitonin (16-32)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Calcitonin, Maltodextrin-binding protein,Calcitonin receptor, ...
著者Lee, S, Pioszak, A.A.
登録日2019-06-21
公開日2020-02-12
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Calcitonin Receptor N-Glycosylation Enhances Peptide Hormone Affinity by Controlling Receptor Dynamics.
J.Mol.Biol., 432, 2020
6W5L
DownloadVisualize
BU of 6w5l by Molmil
2.1 A resolution structure of Norovirus 3CL protease in complex with inhibitor 7g
分子名称: (2~{S})-~{N}-[(1~{R})-1-[bis($l^{1}-oxidanyl)-methoxy-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{R})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-2-[[[2-(3-chlorophenyl)-2-methyl-propoxy]-oxidanylidene-methyl]amino]-4-methyl-pentanamide, 3C-LIKE PROTEASE
著者Lovell, S, Kashipathy, M.M, Battaile, K.P, Rathnayake, A.D, Kim, Y, Chang, K.O, Groutas, W.C.
登録日2020-03-13
公開日2020-09-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Guided Optimization of Dipeptidyl Inhibitors of Norovirus 3CL Protease.
J.Med.Chem., 63, 2020
5JYU
DownloadVisualize
BU of 5jyu by Molmil
NMR structure of pseudo receiver domain of CikA from Thermosynechococcus elongatus
分子名称: Two-component sensor histidine kinase
著者Tseng, R.D, LiWang, A.L.
登録日2016-05-15
公開日2017-03-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of the day-night transition in a bacterial circadian clock.
Science, 355, 2017
5K12
DownloadVisualize
BU of 5k12 by Molmil
Cryo-EM structure of glutamate dehydrogenase at 1.8 A resolution
分子名称: Glutamate dehydrogenase 1, mitochondrial
著者Merk, A, Bartesaghi, A, Banerjee, S, Falconieri, V, Rao, P, Earl, L, Milne, J, Subramaniam, S.
登録日2016-05-17
公開日2016-06-08
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (1.8 Å)
主引用文献Breaking Cryo-EM Resolution Barriers to Facilitate Drug Discovery.
Cell, 165, 2016
1JPW
DownloadVisualize
BU of 1jpw by Molmil
Crystal Structure of a Human Tcf-4 / beta-Catenin Complex
分子名称: BETA-CATENIN, transcription factor 7-like 2
著者Poy, F, Lepourcelet, M, Shivdasani, R.A, Eck, M.J.
登録日2001-08-03
公開日2001-12-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of a human Tcf4-beta-catenin complex.
Nat.Struct.Biol., 8, 2001

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon