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PDB: 89832 results

7A4Z
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BU of 7a4z by Molmil
Structure of DYRK1A in complex with compound 4
Descriptor: 3-(4-methoxyphenyl)-1~{H}-pyrazol-5-amine, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-20
Release date:2021-06-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
7RFX
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BU of 7rfx by Molmil
Importin alpha2 in complex with MERS ORF4B
Descriptor: Importin subunit alpha-1, ORF4b
Authors:Munasinghe, T.S, Tsimbalyuk, S, Roby, J.A, Aragao, D, Forwood, J.K.
Deposit date:2021-07-14
Release date:2021-07-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:MERS-CoV ORF4b employs an unusual binding mechanism to target IMP alpha and block innate immunity.
Nat Commun, 13, 2022
8AID
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BU of 8aid by Molmil
Crystal structure of N-terminally truncated PA4183 from P. aeruginosa PAO1
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, PA4183
Authors:Popp, M.A, Blankenfeldt, W.
Deposit date:2022-07-26
Release date:2022-11-30
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure of N-terminally truncated PA4183 from P. aeruginosa PAO1
To Be Published
7RFZ
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Importin alpha 2 in complex with MERS ORF4B NLS peptide
Descriptor: Importin subunit alpha-1, ORF4b
Authors:Munasinghe, T.S, Tsimbalyuk, S, Roby, J.A, Aragao, D, Forwood, J.K.
Deposit date:2021-07-14
Release date:2021-07-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:MERS-CoV ORF4b employs an unusual binding mechanism to target IMP alpha and block innate immunity.
Nat Commun, 13, 2022
7A51
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BU of 7a51 by Molmil
Structure of DYRK1A in complex with compound 5
Descriptor: 4-azanyl-6-bromanyl-7-methyl-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-20
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
7A5L
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BU of 7a5l by Molmil
tructure of DYRK1A in complex with compound 24
Descriptor: 4-[2-methyl-4-(thiophen-3-ylmethoxy)-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]pyridin-2-amine, CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-21
Release date:2021-06-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
8AGE
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BU of 8age by Molmil
Structure of yeast oligosaccharylransferase complex with acceptor peptide bound
Descriptor: (2~{S},3~{R},4~{R},5~{S},6~{S})-2-(hydroxymethyl)-6-[(1~{S},2~{R},3~{R},4~{R},5'~{S},6~{S},7~{R},8~{S},9~{R},12~{R},13~{R},15~{S},16~{S},18~{R})-5',7,9,13-tetramethyl-3,15-bis(oxidanyl)spiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane-6,2'-oxane]-16-yl]oxy-oxane-3,4,5-triol, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-[3,6-bis(dimethylamino)xanthen-9-yl]-5-methanoyl-benzoate, ...
Authors:Ramirez, A.S, de Capitani, M, Pesciullesi, G, Kowal, J, Bloch, J.S, Irobalieva, R.N, Aebi, M, Reymond, J.L, Locher, K.P.
Deposit date:2022-07-19
Release date:2022-12-07
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Molecular basis for glycan recognition and reaction priming of eukaryotic oligosaccharyltransferase.
Nat Commun, 13, 2022
7ML2
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BU of 7ml2 by Molmil
RNA polymerase II pre-initiation complex (PIC3)
Descriptor: BJ4_G0004860.mRNA.1.CDS.1, BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, ...
Authors:Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K.
Deposit date:2021-04-27
Release date:2022-02-02
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7A52
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BU of 7a52 by Molmil
Structure of DYRK1A in complex with compound 6
Descriptor: 3-phenyl-1H,4H,5H-pyrazolo[3,4-d]pyrimidin-4-one, DIMETHYL SULFOXIDE, Dual specificity tyrosine-phosphorylation-regulated kinase 1A, ...
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-20
Release date:2021-06-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
1YKX
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Effect of alcohols on protein hydration
Descriptor: CHLORIDE ION, ETHANOL, Lysozyme C, ...
Authors:Deshpande, A, Nimsadkar, S, Mande, S.C.
Deposit date:2005-01-18
Release date:2005-07-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Effect of alcohols on protein hydration: crystallographic analysis of hen egg-white lysozyme in the presence of alcohols.
Acta Crystallogr.,Sect.D, 61, 2005
6XZI
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BU of 6xzi by Molmil
Structure of zVDR LBD-calcitriol in complex with chimera 11
Descriptor: 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL, ACETATE ION, ARG-HIS-LYS-ILE-LEU-URK-UIL-URL, ...
Authors:Buratto, J, Belorusova, A.Y, Rochel, N, Guichard, G.
Deposit date:2020-02-04
Release date:2021-02-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for alpha-Helix Mimicry and Inhibition of Protein-Protein Interactions with Oligourea Foldamers.
Angew.Chem.Int.Ed.Engl., 60, 2021
7RG0
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BU of 7rg0 by Molmil
Importin alpha2 in complex with MERS ORF4B R24A mutant
Descriptor: Importin subunit alpha-1, ORF4b
Authors:Munasinghe, T.S, Tsimbalyuk, S, Roby, J.A, Aragao, D, Forwood, J.K.
Deposit date:2021-07-14
Release date:2021-07-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:MERS-CoV ORF4b employs an unusual binding mechanism to target IMP alpha and block innate immunity.
Nat Commun, 13, 2022
7RFY
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BU of 7rfy by Molmil
Importin alpha3 in complex with MERS ORF4B
Descriptor: Importin subunit alpha-3, ORF4b
Authors:Munasinghe, T.S, Tsimbalyuk, S, Roby, J.A, Aragao, D, Forwood, J.K.
Deposit date:2021-07-14
Release date:2021-07-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:MERS-CoV ORF4b employs an unusual binding mechanism to target IMP alpha and block innate immunity.
Nat Commun, 13, 2022
7A5N
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BU of 7a5n by Molmil
Structure of DYRK1A in complex with compound 34
Descriptor: 5-(2-azanylpyridin-4-yl)-~{N}-[[2,6-bis(fluoranyl)phenyl]methyl]-2-methyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-amine, CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Hubbard, R.E.
Deposit date:2020-08-21
Release date:2021-06-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
4QF2
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BU of 4qf2 by Molmil
Crystal structure of human BAZ2A PHD zinc finger in the free form
Descriptor: Bromodomain adjacent to zinc finger domain protein 2A, GLYCEROL, PHOSPHATE ION, ...
Authors:Tallant, C, Overvoorde, L, Van Molle, I, Chirgadze, D.Y, Ciulli, A.
Deposit date:2014-05-19
Release date:2014-07-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular basis of histone tail recognition by human TIP5 PHD finger and bromodomain of the chromatin remodeling complex NoRC.
Structure, 23, 2015
6ZXS
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BU of 6zxs by Molmil
Cold grown Pea Photosystem I
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Caspy, I, Borovikova-Sheinker, A, Subramanyam, R, Nelson, N.
Deposit date:2020-07-30
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of cold grown pea Photosystem I
To Be Published
2VCQ
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BU of 2vcq by Molmil
Complex structure of prostaglandin D2 synthase at 1.95A.
Descriptor: 3-phenyl-5-(1H-pyrazol-3-yl)isoxazole, GLUTATHIONE, GLUTATHIONE-REQUIRING PROSTAGLANDIN D SYNTHASE
Authors:Hohwy, M, Spadola, L, Lundquist, B, von Wachenfeldt, K, Persdotter, S, Hawtin, P, Dahmen, J, Groth-Clausen, I, Folmer, R.H.A, Edman, K.
Deposit date:2007-09-26
Release date:2008-04-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Novel Prostaglandin D Synthase Inhibitors Generated by Fragment-Based Drug Design.
J.Med.Chem., 51, 2008
6UIH
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BU of 6uih by Molmil
Crystal structure of the core domain from the GST-like protein GDAP1
Descriptor: Ganglioside-induced differentiation-associated protein 1
Authors:Googins, M.R, VanDemark, A.P.
Deposit date:2019-09-30
Release date:2020-04-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.826 Å)
Cite:Structural and functional divergence of GDAP1 from the glutathione S-transferase superfamily.
Faseb J., 34, 2020
1YKY
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BU of 1yky by Molmil
Effect of alcohols on protein hydration
Descriptor: 1-BUTANOL, CHLORIDE ION, Lysozyme C, ...
Authors:Deshpande, A, Nimsadkar, S, Mande, S.C.
Deposit date:2005-01-18
Release date:2005-07-05
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Effect of alcohols on protein hydration: crystallographic analysis of hen egg-white lysozyme in the presence of alcohols.
Acta Crystallogr.,Sect.D, 61, 2005
6U1N
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BU of 6u1n by Molmil
GPCR-Beta arrestin structure in lipid bilayer
Descriptor: 3-amino-5-chloro-N-cyclopropyl-4-methyl-6-[2-(4-methylpiperazin-1-yl)-2-oxoethoxy]thieno[2,3-b]pyridine-2-carboxamide, Beta-arrestin-1, Fab30 heavy chain, ...
Authors:Staus, D.P, Hu, H, Robertson, M.J, Kleinhenz, A.L.W, Wingler, L.M, Capel, W.D, Latorraca, N.R, Lefkowitz, R.J, Skiniotis, G.
Deposit date:2019-08-16
Release date:2020-02-26
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of the M2 muscarinic receptor-beta-arrestin complex in a lipid nanodisc.
Nature, 579, 2020
5C85
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BU of 5c85 by Molmil
Crystal structure of the human BRPF1 bromodomain in complex with SEED1
Descriptor: 6-bromo-3,4-dihydroquinoxalin-2(1H)-one, NITRATE ION, Peregrin
Authors:Zhu, J, Caflisch, A.
Deposit date:2015-06-25
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
7ABM
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BU of 7abm by Molmil
X-ray structure of phosphorylated Barrier-to-autointegration factor (BAF)
Descriptor: Barrier-to-autointegration factor, CESIUM ION
Authors:Zinn-Justin, S, Marcelot, A, Le Du, M.H, Ropars, V.
Deposit date:2020-09-08
Release date:2021-07-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:Di-phosphorylated BAF shows altered structural dynamics and binding to DNA, but interacts with its nuclear envelope partners.
Nucleic Acids Res., 49, 2021
5M9N
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BU of 5m9n by Molmil
Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
Descriptor: 1,2-ETHANEDIOL, E2F peptide, N3, ...
Authors:Tallant, C, Savitsky, P, Moehlenbrink, J, Chan, C, Nunez-Alonso, G, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Fedorov, O, La Thangue, N.B, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2016-11-01
Release date:2016-11-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
To Be Published
1YKZ
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BU of 1ykz by Molmil
Effect of alcohols on protein hydration
Descriptor: CHLORIDE ION, Lysozyme C, PENTANAL, ...
Authors:Deshpande, A, Nimsadkar, S, Mande, S.C.
Deposit date:2005-01-18
Release date:2005-07-05
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effect of alcohols on protein hydration: crystallographic analysis of hen egg-white lysozyme in the presence of alcohols.
Acta Crystallogr.,Sect.D, 61, 2005
8GOM
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BU of 8gom by Molmil
SARS-CoV-2 specific private TCR RLQ7 in complex with RLQ-HLA-A2
Descriptor: Beta-2-microglobulin, MHC class I antigen, SARS-CoV-2 specific private TCR RLQ7 alpha, ...
Authors:Wu, D, Mariuzza, R.A.
Deposit date:2022-08-25
Release date:2023-03-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.783 Å)
Cite:Structural insights into protection against a SARS-CoV-2 spike variant by T cell receptor (TCR) diversity.
J.Biol.Chem., 299, 2023

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PDB entries from 2024-11-13

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