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PDB: 89774 results

4DKY
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BU of 4dky by Molmil
Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Ra]
Descriptor: DNA-binding protein HU homolog, MANGANESE (II) ION
Authors:Bhowmick, T, Ramagopal, U.A, Ghosh, S, Nagaraja, V, Ramakumar, S.
Deposit date:2012-02-05
Release date:2013-02-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.478 Å)
Cite:Targeting Mycobacterium tuberculosis nucleoid-associated protein HU with structure-based inhibitors
Nat Commun, 5, 2014
4V8A
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BU of 4v8a by Molmil
The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Bulkley, D, Johnson, F.A, Steitz, T.A.
Deposit date:2011-12-05
Release date:2014-07-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The antibiotic thermorubin inhibits protein synthesis by binding to inter-subunit bridge b2a of the ribosome.
J.Mol.Biol., 416, 2012
1CGN
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BU of 1cgn by Molmil
CYTOCHROME C'
Descriptor: CYTOCHROME C, HEME C
Authors:Dobbs, A.J, Faber, H.R, Anderson, B.F, Baker, E.N.
Deposit date:1995-05-01
Release date:1995-07-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Three-dimensional structure of cytochrome c' from two Alcaligenes species and the implications for four-helix bundle structures.
Acta Crystallogr.,Sect.D, 52, 1996
4V53
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BU of 4v53 by Molmil
Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.
Descriptor: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 16S rRNA, 23S rRNA, ...
Authors:Borovinskaya, M.A, Pai, R.D, Zhang, W, Schuwirth, B.-S, Holton, J.M, Hirokawa, G, Kaji, H, Kaji, A, Cate, J.H.D.
Deposit date:2007-06-16
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.54 Å)
Cite:Structural basis for aminoglycoside inhibition of bacterial ribosome recycling.
Nat.Struct.Mol.Biol., 14, 2007
4V0V
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BU of 4v0v by Molmil
The crystal structure of mouse PP1G in complex with truncated human PPP1R15B (631-660)
Descriptor: MANGANESE (II) ION, PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 15B, SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-GAMMA CATALYTIC SUBUNIT, ...
Authors:Chen, R, Yan, Y, Casado, A.C, Ron, D, Read, R.J.
Deposit date:2014-09-18
Release date:2015-03-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:G-actin provides substrate-specificity to eukaryotic initiation factor 2 alpha holophosphatases.
Elife, 4, 2015
4UVC
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BU of 4uvc by Molmil
LSD1(KDM1A)-CoREST in complex with 1-Phenyl-Tranylcypromine
Descriptor: LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A, REST COREPRESSOR 1, [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4S)-5-[5-[(1S)-1-azanyl-1,3-diphenyl-propyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-4aH-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentyl] hydrogen phosphate
Authors:Vianello, P, Botrugno, O, Cappa, A, Ciossani, G, Dessanti, P, Mai, A, Mattevi, A, Meroni, G, Minucci, S, Thaler, F, Tortorici, M, Trifiro, P, Valente, S, Villa, M, Varasi, M, Mercurio, C.
Deposit date:2014-08-05
Release date:2014-09-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Synthesis, Biological Activity and Mechanistic Insights of 1-Substituted Cyclopropylamine Derivatives: A Novel Class of Irreversible Inhibitors of Histone Demethylase Kdm1A.
Eur.J.Med.Chem., 86C, 2014
4US6
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BU of 4us6 by Molmil
New Crystal Form of Glucose Isomerase Grown in Short Peptide Supramolecular Hydrogels
Descriptor: CALCIUM ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Gavira, J.A, Conejero-Muriel, M, Diaz-Mochon, J.J, Alvarez de Cienfuegos, L.
Deposit date:2014-07-03
Release date:2015-05-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Influence of the Chirality of Short Peptide Supramolecular Hydrogels in Protein Crystallogenesis.
Chem.Commun.(Camb.), 51, 2015
1U84
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BU of 1u84 by Molmil
Crystal Structure of APC36109 from Bacillus stearothermophilus
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Hypothetical protein
Authors:Kim, Y, Zhou, M, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-08-04
Release date:2004-10-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of APC36109 from Bacillus stearothermophilus
To be Published
4DC5
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BU of 4dc5 by Molmil
Crystal Structure of Thaumatin Unexposed to Excessive SONICC Imaging Laser Dose.
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin I
Authors:Mulichak, A.M, Becker, M, Kissick, D.J, Keefe, L.J, Fischetti, R.F, Simpson, G.J.
Deposit date:2012-01-17
Release date:2013-01-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Towards protein-crystal centering using second-harmonic generation (SHG) microscopy.
Acta Crystallogr.,Sect.D, 69, 2013
6QPP
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BU of 6qpp by Molmil
Rhizomucor miehei lipase propeptide complex, native
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase
Authors:Moroz, O.V, Blagova, E, Reiser, V, Saikia, R, Dalal, S, Jorgensen, C.I, Baunsgaard, L, Andersen, B, Svendsen, A, Wilson, K.S.
Deposit date:2019-02-14
Release date:2019-03-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Novel Inhibitory Function of theRhizomucor mieheiLipase Propeptide and Three-Dimensional Structures of Its Complexes with the Enzyme.
Acs Omega, 4, 2019
6QPR
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BU of 6qpr by Molmil
Rhizomucor miehei lipase propeptide complex, Ser95/Ile96 deletion mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase
Authors:Moroz, O.V, Blagova, E, Reiser, V, Saikia, R, Dalal, S, Jorgensen, C.I, Baunsgaard, L, Andersen, B, Svendsen, A, Wilson, K.S.
Deposit date:2019-02-14
Release date:2019-03-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Novel Inhibitory Function of theRhizomucor mieheiLipase Propeptide and Three-Dimensional Structures of Its Complexes with the Enzyme.
Acs Omega, 4, 2019
4DB8
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BU of 4db8 by Molmil
Designed Armadillo-repeat Protein
Descriptor: Armadillo-repeat Protein, MAGNESIUM ION
Authors:Madhurantakam, C, Varadamsetty, G, Grutter, M.G, Pluckthun, A, Mittl, P.R.E.
Deposit date:2012-01-13
Release date:2012-05-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based optimization of designed Armadillo-repeat proteins.
Protein Sci., 21, 2012
1KFX
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BU of 1kfx by Molmil
Crystal Structure of Human m-Calpain Form I
Descriptor: M-CALPAIN LARGE SUBUNIT, M-CALPAIN SMALL SUBUNIT
Authors:Strobl, S, Fernandez-Catalan, C, Braun, M, Huber, R, Masumoto, H, Nakagawa, K, Irie, A, Sorimachi, H, Bourenkow, G, Bartunik, H, Suzuki, K, Bode, W.
Deposit date:2001-11-23
Release date:2001-12-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:The crystal structure of calcium-free human m-calpain suggests an electrostatic switch mechanism for activation by calcium.
Proc.Natl.Acad.Sci.USA, 97, 2000
4M5A
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BU of 4m5a by Molmil
Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina inhibited by asymmetric dimethyl arginine at 1.70 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NG,NG-DIMETHYL-L-ARGININE, rRNA N-glycosidase
Authors:Yamini, S, Pandey, S, Kushwaha, G.S, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-08-08
Release date:2013-08-28
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina inhibited by asymmetric dimethyl arginine at 1.70 A resolution
To be Published
1U2H
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BU of 1u2h by Molmil
X-ray Structure of the N-terminally truncated human APEP-1
Descriptor: Aortic preferentially expressed protein 1
Authors:Manjasetty, B.A, Scheich, C, Roske, Y, Niesen, F.H, Gotz, F, Bussow, K, Heinemann, U.
Deposit date:2004-07-19
Release date:2005-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:X-ray structure of engineered human Aortic Preferentially Expressed Protein-1 (APEG-1)
Bmc Struct.Biol., 5, 2005
5XPX
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BU of 5xpx by Molmil
Structure elucidation of truncated AMS3 lipase from an Antarctic Pseudomonas
Descriptor: CALCIUM ION, Lipase, ZINC ION
Authors:Rahman, R.N.Z.R.A, Latip, W.
Deposit date:2017-06-05
Release date:2018-06-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structure elucidation of truncated AMS3 lipase from an Antarctic Pseudomonas
To Be Published
6F9C
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BU of 6f9c by Molmil
Model of the Rift Valley fever virus glycoprotein hexamer type 1
Descriptor: Glycoprotein
Authors:Halldorsson, S, Bowden, T.A, Huiskonen, J.T.
Deposit date:2017-12-14
Release date:2018-01-31
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Shielding and activation of a viral membrane fusion protein.
Nat Commun, 9, 2018
3ATV
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BU of 3atv by Molmil
Crystal structure of human Hsp70 NBD in the ADP-bound and Mg ion-free state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Heat shock 70 kDa protein 1A/1B, ...
Authors:Arakawa, A, Handa, N, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-01-13
Release date:2011-12-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Biochemical and structural studies on the high affinity of Hsp70 for ADP.
Protein Sci., 20, 2011
1U20
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BU of 1u20 by Molmil
Crystal Structure of Xenopus laevis nudix hydrolase nuclear SnoRNA decapping Protein X29
Descriptor: GLYCEROL, U8 snoRNA-binding protein X29
Authors:Scarsdale, J.N, Peculis, B.A, Wright, H.T.
Deposit date:2004-07-16
Release date:2005-07-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Xenopus laevis nudix hydrolase nuclear SnoRNA decapping Protein X29
TO BE PUBLISHED
4LP2
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BU of 4lp2 by Molmil
Crystal structure of monomeric ligand binding domain of S. typhimurium CysB, a LysR transcriptional regulator at 2.2A
Descriptor: HTH-type transcriptional regulator CysB
Authors:Mittal, M, Singh, A.K, Kumaran, S.
Deposit date:2013-07-15
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of monomeric ligand binding domain of S. typhimurium CysB, a LysR transcriptional regulator at 2.2A
To be Published
5XEQ
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BU of 5xeq by Molmil
Crystal Structure of human MDGA1 and human neuroligin-2 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MAM domain-containing glycosylphosphatidylinositol anchor protein 1, ...
Authors:Kim, H.M, Kim, J.A, Kim, D.
Deposit date:2017-04-05
Release date:2017-07-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.136 Å)
Cite:Structural Insights into Modulation of Neurexin-Neuroligin Trans-synaptic Adhesion by MDGA1/Neuroligin-2 Complex
Neuron, 94, 2017
4LPQ
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BU of 4lpq by Molmil
Crystal structure of the L,D-transpeptidase (residues 123-326) from Xylanimonas cellulosilytica DSM 15894
Descriptor: CHLORIDE ION, ErfK/YbiS/YcfS/YnhG family protein
Authors:Nocek, B, Bigelow, L, Endres, M, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-07-16
Release date:2013-11-13
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of the L,D-transpeptidase (residues 123-326) from Xylanimonas cellulosilytica DSM 15894
To be Published
3AQ3
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BU of 3aq3 by Molmil
Molecular insights into plant cell proliferation disturbance by Agrobacterium protein 6b
Descriptor: 6b protein
Authors:Wang, M.M, Yuan, Y.A.
Deposit date:2010-10-25
Release date:2011-01-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular insights into plant cell proliferation disturbance by Agrobacterium protein 6b
Genes Dev., 25, 2011
3AQ2
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BU of 3aq2 by Molmil
Molecular insights into plant cell proliferation disturbance by Agrobacterium protein 6b
Descriptor: 6b protein
Authors:Wang, M.M, Yuan, Y.A.
Deposit date:2010-10-25
Release date:2011-01-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular insights into plant cell proliferation disturbance by Agrobacterium protein 6b
Genes Dev., 25, 2011
8C7G
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BU of 8c7g by Molmil
Drosophila melanogaster Rab7 GEF complex Mon1-Ccz1-Bulli
Descriptor: Caffeine, calcium, zinc sensitivity 1, ...
Authors:Schaefer, J, Herrmann, E, Kuemmel, D, Moeller, A.
Deposit date:2023-01-15
Release date:2023-05-17
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the metazoan Rab7 GEF complex Mon1-Ccz1-Bulli.
Proc.Natl.Acad.Sci.USA, 120, 2023

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PDB entries from 2024-11-06

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