Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4V86
DownloadVisualize
BU of 4v86 by Molmil
Structure-function Analysis of Receptor-binding in Adeno-Associated Virus Serotype 6 (AAV-6)
分子名称: Capsid protein VP1
著者Xie, Q.
登録日2011-09-13
公開日2014-07-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献Structure-function analysis of receptor-binding in adeno-associated virus serotype 6 (AAV-6).
Virology, 420, 2011
1LP3
DownloadVisualize
BU of 1lp3 by Molmil
The Atomic Structure of Adeno-Associated Virus (AAV-2), a Vector for Human Gene Therapy
分子名称: AAV-2 capsid protein
著者Xie, Q, Bu, W, Bhatia, S, Hare, J, Somasundaram, T, Azzi, A, Chapman, M.S.
登録日2002-05-07
公開日2002-08-07
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The atomic structure of adeno-associated virus (AAV-2), a vector for human gene therapy.
Proc.Natl.Acad.Sci.USA, 99, 2002
6CXC
DownloadVisualize
BU of 6cxc by Molmil
3.9A Cryo-EM structure of murine antibody bound at a novel epitope of respiratory syncytial virus fusion protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, Envelope glycoprotein chimera, ...
著者Xie, Q, Wang, Z, Chen, X, Ni, F, Ma, J, Wang, Q.
登録日2018-04-02
公開日2019-07-31
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure basis of neutralization by a novel site II/IV antibody against respiratory syncytial virus fusion protein.
Plos One, 14, 2019
6E52
DownloadVisualize
BU of 6e52 by Molmil
Chimeric structure of Saccharomyces cerevisiae GCN4 leucine zipper fused to Staphylococcus aureus AgrC cytoplasmic histidine kinase module (dataset anisotropically truncated by STARANISO)
分子名称: Staphylococcus aureus AgrC histidine kinase module fused to Saccharomyces cerevisiae GCN4 leucine zipper
著者Xie, Q, Jeffrey, P.D, Muir, T.W.
登録日2018-07-19
公開日2019-02-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Identification of a Molecular Latch that Regulates Staphylococcal Virulence.
Cell Chem Biol, 26, 2019
6E95
DownloadVisualize
BU of 6e95 by Molmil
Chimeric structure of Saccharomyces cerevisiae GCN4 leucine zipper fused to Staphylococcus aureus AgrC cytoplasmic histidine kinase module (dataset isotropically truncated by HKL2000)
分子名称: Staphylococcus aureus AgrC histidine kinase module fused to Saccharomyces cerevisiae GCN4 leucine zipper
著者Xie, Q, Jeffrey, P.D, Muir, T.W.
登録日2018-07-31
公開日2019-02-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Identification of a Molecular Latch that Regulates Staphylococcal Virulence.
Cell Chem Biol, 26, 2019
3SHM
DownloadVisualize
BU of 3shm by Molmil
Structure-function Analysis of Receptor Binding in Adeno-Associated Virus Serotype 6 (AAV-6)
分子名称: Capsid protein VP1
著者Xie, Q, Lerch, T.F, Meyer, N.L, Chapman, M.S.
登録日2011-06-16
公開日2011-10-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.019 Å)
主引用文献Structure-function analysis of receptor-binding in adeno-associated virus serotype 6 (AAV-6).
Virology, 420, 2011
3J4P
DownloadVisualize
BU of 3j4p by Molmil
Electron Microscopy Analysis of a Disaccharide Analog complex Reveals Receptor Interactions of Adeno-Associated Virus
分子名称: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, Capsid protein VP1, MAGNESIUM ION, ...
著者Xie, Q, Chapman, M.S.
登録日2013-09-10
公開日2013-10-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Electron microscopy analysis of a disaccharide analog complex reveals receptor interactions of adeno-associated virus.
J.Struct.Biol., 184, 2013
5UF6
DownloadVisualize
BU of 5uf6 by Molmil
The 2.8 A Electron Microscopy Structure of Adeno-Associated Virus-DJ Bound by a Heparanoid Pentasaccharide
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-methyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside, capsid protein VP1
著者Xie, Q, Spear, J.M, Noble, A.J, Sousa, D.R, Meyer, N.L, Davulcu, O, Zhang, F, Linhardt, R.J, Stagg, S.M, Chapman, M.
登録日2017-01-03
公開日2017-05-24
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献The 2.8 angstrom Electron Microscopy Structure of Adeno-Associated Virus-DJ Bound by a Heparinoid Pentasaccharide.
Mol Ther Methods Clin Dev, 5, 2017
7KFR
DownloadVisualize
BU of 7kfr by Molmil
Adeno-Associated Virus (AAV-DJ) - cryo-EM structure at 1.56 Angstrom Resolution
分子名称: Capsid protein VP1, MAGNESIUM ION
著者Xie, Q, Yoshioka, C.K, Chapman, M.S.
登録日2020-10-14
公開日2020-12-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (1.56 Å)
主引用文献Adeno-Associated Virus (AAV-DJ)-Cryo-EM Structure at 1.56 Angstroms Resolution.
Viruses, 12, 2020
2W6C
DownloadVisualize
BU of 2w6c by Molmil
ACHE IN COMPLEX WITH A BIS-(-)-NOR-MEPTAZINOL DERIVATIVE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[(3R)-3-ethyl-1-{9-[(3S)-3-ethyl-3-(3-hydroxyphenyl)azepan-1-yl]nonyl}azepan-3-yl]phenol, ...
著者Paz, A, Xie, Q, Greenblatt, H.M, Fu, W, Tang, Y, Silman, I, Qiu, Z, Sussman, J.L.
登録日2008-12-18
公開日2009-04-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献The Crystal Structure of a Complex of Acetylcholinesterase with a Bis-(-)-Nor-Meptazinol Derivative Reveals Disruption of the Catalytic Triad.
J.Med.Chem., 52, 2009
1HBR
DownloadVisualize
BU of 1hbr by Molmil
R-STATE FORM OF CHICKEN HEMOGLOBIN D
分子名称: PROTEIN (HEMOGLOBIN D), PROTOPORPHYRIN IX CONTAINING FE
著者Knapp, E, Oliveira, M.A, Xie, Q, Ernst, S.R, Riggs, A.F, Hackert, M.L.
登録日1998-12-06
公開日1999-03-26
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The structural and functional analysis of the hemoglobin D component from chicken.
J.Biol.Chem., 274, 1999
1YXJ
DownloadVisualize
BU of 1yxj by Molmil
Crystal structure of human lectin-like oxidized low-density lipoprotein receptor 1 (LOX-1) at low pH
分子名称: 1,2-ETHANEDIOL, oxidised low density lipoprotein (lectin-like) receptor 1
著者Ohki, I, Ishigaki, T, Oyama, T, Matsunaga, S, Xie, Q, Ohnishi-Kameyama, M, Murata, T, Tsuchiya, D, Machida, S, Morikawa, K, Tate, S.
登録日2005-02-22
公開日2005-06-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of human lectin-like, oxidized low-density lipoprotein receptor 1 ligand binding domain and its ligand recognition mode to OxLDL.
Structure, 13, 2005
1YXK
DownloadVisualize
BU of 1yxk by Molmil
Crystal structure of human lectin-like oxidized low-density lipoprotein receptor 1 (LOX-1) disulfide-linked dimer
分子名称: oxidised low density lipoprotein (lectin-like) receptor 1
著者Ohki, I, Ishigaki, T, Oyama, T, Matsunaga, S, Xie, Q, Ohnishi-Kameyama, M, Murata, T, Tsuchiya, D, Machida, S, Morikawa, K, Tate, S.
登録日2005-02-22
公開日2005-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of human lectin-like, oxidized low-density lipoprotein receptor 1 ligand binding domain and its ligand recognition mode to OxLDL.
Structure, 13, 2005
7RAV
DownloadVisualize
BU of 7rav by Molmil
Cryo-EM structure of the unliganded form of NLR family apoptosis inhibitory protein 5 (NAIP5)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Baculoviral IAP repeat-containing protein 1e
著者Paidimuddala, B, Cao, J, Xie, Q, Wu, H, Zhang, L.
登録日2021-07-02
公開日2023-01-11
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Mechanism of NAIP-NLRC4 inflammasome activation revealed by cryo-EM structure of unliganded NAIP5.
Nat.Struct.Mol.Biol., 30, 2023
6NZ0
DownloadVisualize
BU of 6nz0 by Molmil
Cryo-EM structure of AAV-2 in complex with AAVR PKD domains 1 and 2
分子名称: Capsid protein VP1, Dyslexia-associated protein KIAA0319-like protein, MAGNESIUM ION
著者Meyer, N.L, Xie, Q, Davulcu, O, Yoshioka, C, Chapman, M.S.
登録日2019-02-12
公開日2019-06-12
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structure of the gene therapy vector, adeno-associated virus with its cell receptor, AAVR.
Elife, 8, 2019
3KIC
DownloadVisualize
BU of 3kic by Molmil
Crystal structure of adeno-associated virus serotype 3B
分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Capsid protein VP1
著者Lerch, T.F, Xie, Q, Chapman, M.S.
登録日2009-11-01
公開日2010-04-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献The structure of adeno-associated virus serotype 3B (AAV-3B): insights into receptor binding and immune evasion.
Virology, 403, 2010
3KIE
DownloadVisualize
BU of 3kie by Molmil
Crystal structure of adeno-associated virus serotype 3B
分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Capsid protein VP1
著者Lerch, T.F, Xie, Q, Chapman, M.S.
登録日2009-11-01
公開日2010-04-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of adeno-associated virus serotype 3B (AAV-3B): insights into receptor binding and immune evasion.
Virology, 403, 2010
3J1Q
DownloadVisualize
BU of 3j1q by Molmil
Structure of AAV-DJ, a Retargeted Gene Therapy Vector: Cryo-Electron Microscopy at 4.5A resolution
分子名称: Adeno-associated virus DJ
著者Lerch, T.F, O'Donnell, J.K, Meyer, N.L, Xie, Q, Taylor, K.A, Stagg, S.M, Chapman, M.S.
登録日2012-04-30
公開日2012-08-22
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structure of AAV-DJ, a retargeted gene therapy vector: cryo-electron microscopy at 4.5 A resolution.
Structure, 20, 2012
7EN0
DownloadVisualize
BU of 7en0 by Molmil
Structure and Activity of SLAC1 Channels for Stomatal Signaling in Leaves
分子名称: DIUNDECYL PHOSPHATIDYL CHOLINE, SLow Anion Channel 1, SPHINGOSINE
著者Deng, Y, Kashtoh, H, Wang, Q, Zhen, G, Li, Q, Tang, L, Gao, H, Zhang, C, Qin, L, Su, M, Li, F, Huang, X, Wang, Y, Xie, Q, Clarke, O.B, Hendrickson, W.A, Chen, Y.
登録日2021-04-15
公開日2021-05-19
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Structure and activity of SLAC1 channels for stomatal signaling in leaves.
Proc.Natl.Acad.Sci.USA, 118, 2021
4DPV
DownloadVisualize
BU of 4dpv by Molmil
PARVOVIRUS/DNA COMPLEX
分子名称: DNA (5'-D(*AP*TP*AP*CP*CP*TP*CP*TP*TP*GP*C)-3'), MAGNESIUM ION, PROTEIN (PARVOVIRUS COAT PROTEIN)
著者Chapman, M.S, Rossmann, M.G.
登録日1996-02-01
公開日1997-04-01
最終更新日2023-04-19
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Canine parvovirus capsid structure, analyzed at 2.9 A resolution.
J.Mol.Biol., 264, 1996
2QJ2
DownloadVisualize
BU of 2qj2 by Molmil
A Mechanistic Basis for Converting a Receptor Tyrosine Kinase Agonist to an Antagonist
分子名称: Hepatocyte growth factor, SULFATE ION
著者Tolbert, W.D, Daugherty, J, Gao, C.-F, Xe, Q, Miranti, C, Gherardi, E, Vande Woude, G, Xu, H.E.
登録日2007-07-06
公開日2007-09-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献A mechanistic basis for converting a receptor tyrosine kinase agonist to an antagonist
Proc.Natl.Acad.Sci.Usa, 104, 2007
2QJ4
DownloadVisualize
BU of 2qj4 by Molmil
A Mechanistic Basis for Converting a Receptor Tyrosine Kinase Agonist to an Antagonist
分子名称: Hepatocyte growth factor, SULFATE ION
著者Tolbert, W.D, Daugherty, J, Gao, C.-F, Xe, Q, Miranti, C, Gherardi, E, Vande Woude, G, Xu, H.E.
登録日2007-07-06
公開日2007-09-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A mechanistic basis for converting a receptor tyrosine kinase agonist to an antagonist
Proc.Natl.Acad.Sci.Usa, 104, 2007
6J36
DownloadVisualize
BU of 6j36 by Molmil
crystal structure of Mycoplasma hyopneumoniae Enolase
分子名称: Enolase, GLYCEROL, SULFATE ION
著者Chen, R, Zhang, S, Gan, R, Xie, X, Feng, Z, Wang, W, Ran, T, Zhang, W, Xiang, Q, Shao, G.
登録日2019-01-04
公開日2019-05-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Featured Species-Specific Loops Are Found in the Crystal Structure ofMhpEno, a Cell Surface Adhesin FromMycoplasma hyopneumoniae.
Front Cell Infect Microbiol, 9, 2019
8HYA
DownloadVisualize
BU of 8hya by Molmil
Cryo-EM structure of Arabidopsis thaliana SOS1 in an occluded state, with expanded TMD
分子名称: HEXADECANE, Sodium/hydrogen exchanger 7
著者Wang, Y, Zhao, Y, Gao, Y.
登録日2023-01-06
公開日2023-08-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Architecture and autoinhibitory mechanism of the plasma membrane Na+/H+ antiporter SOS1 in Arabidopsis
Nat Commun, 14, 2023
8JWY
DownloadVisualize
BU of 8jwy by Molmil
Crystal structure of A2AR-T4L in complex with 2-118
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3-[2-azanyl-6-[2-oxidanylidene-1-[[6-(2-oxidanylpropan-2-yl)pyridin-2-yl]methyl]pyridin-4-yl]pyrimidin-4-yl]-2-methyl-benzenecarbonitrile, Adenosine receptor A2a,Endolysin, ...
著者Weng, Y, Chen, Y, Xu, Y, Song, G.
登録日2023-06-29
公開日2023-08-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Structural insight into the dual-antagonistic mechanism of AB928 on adenosine A 2 receptors.
Sci China Life Sci, 2024

 

12>

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon