Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7RKP
DownloadVisualize
BU of 7rkp by Molmil
The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with cyclic compound SJ001034733
Descriptor: (5R)-5-hydroxy-16,21-dioxa-3,8,28-triazatetracyclo[20.3.1.1~2,6~.1~11,15~]octacosa-1(26),2,6(28),11(27),12,14,22,24-octaene-4,7-dione, Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, ...
Authors:Cuypers, M.G, Slavish, J.P, Rankovic, Z, White, S.W.
Deposit date:2021-07-22
Release date:2022-07-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential.
Eur.J.Med.Chem., 247, 2023
5CCY
DownloadVisualize
BU of 5ccy by Molmil
2009 H1N1 PA endonuclease in complex with dTMP
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, THYMIDINE-5'-PHOSPHATE
Authors:Kumar, G, White, S.W.
Deposit date:2015-07-02
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc.Natl.Acad.Sci.USA, 113, 2016
5CL0
DownloadVisualize
BU of 5cl0 by Molmil
2009 H1N1 PA endonuclease in complex with rUMP
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, URIDINE-5'-MONOPHOSPHATE
Authors:Kumar, G, White, S.W.
Deposit date:2015-07-15
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc.Natl.Acad.Sci.USA, 113, 2016
5CGV
DownloadVisualize
BU of 5cgv by Molmil
2009 H1N1 PA endonuclease in complex with L-742,001
Descriptor: (2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid, GLYCEROL, MANGANESE (II) ION, ...
Authors:Kumar, G, White, S.W.
Deposit date:2015-07-09
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5D42
DownloadVisualize
BU of 5d42 by Molmil
2009 H1N1 PA endonuclease mutant F105S in complex with dTMP
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, THYMIDINE-5'-PHOSPHATE
Authors:Kumar, G, White, S.W.
Deposit date:2015-08-07
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc.Natl.Acad.Sci.USA, 113, 2016
5DEB
DownloadVisualize
BU of 5deb by Molmil
2009 H1N1 PA endonuclease mutant E119D in complex with rUMP
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, URIDINE-5'-MONOPHOSPHATE
Authors:Kumar, G, White, S.W.
Deposit date:2015-08-25
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc.Natl.Acad.Sci.USA, 113, 2016
5D2O
DownloadVisualize
BU of 5d2o by Molmil
2009 H1N1 PA endonuclease mutant F105S
Descriptor: MANGANESE (II) ION, Polymerase acidic protein
Authors:Kumar, G, White, S.W.
Deposit date:2015-08-05
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc.Natl.Acad.Sci.USA, 113, 2016
5D8U
DownloadVisualize
BU of 5d8u by Molmil
2009 H1N1 PA endonuclease mutant E119D in complex with L-742,001
Descriptor: (2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid, MANGANESE (II) ION, Polymerase acidic protein
Authors:Kumar, G, White, S.W.
Deposit date:2015-08-18
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc.Natl.Acad.Sci.USA, 113, 2016
5D4G
DownloadVisualize
BU of 5d4g by Molmil
2009 H1N1 PA endonuclease mutant F105S in complex with rUMP
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, URIDINE-5'-MONOPHOSPHATE
Authors:Kumar, G, White, S.W.
Deposit date:2015-08-07
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5D9J
DownloadVisualize
BU of 5d9j by Molmil
2009 H1N1 PA endonuclease mutant F105S in complex with L-742,001
Descriptor: (2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid, MANGANESE (II) ION, Polymerase acidic protein
Authors:Kumar, G, White, S.W.
Deposit date:2015-08-18
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc.Natl.Acad.Sci.USA, 113, 2016
5CZN
DownloadVisualize
BU of 5czn by Molmil
2009 H1N1 PA endonuclease mutant E119D
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, SULFATE ION
Authors:Kumar, G, White, S.W.
Deposit date:2015-07-31
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc.Natl.Acad.Sci.USA, 113, 2016
5DBS
DownloadVisualize
BU of 5dbs by Molmil
2009 H1N1 PA endonuclease mutant E119D in complex with dTMP
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, SULFATE ION, ...
Authors:Kumar, G, White, S.W.
Deposit date:2015-08-21
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5DES
DownloadVisualize
BU of 5des by Molmil
2009 H1N1 PA endonuclease domain
Descriptor: MANGANESE (II) ION, Polymerase acidic protein
Authors:Kumar, G, White, S.W.
Deposit date:2015-08-25
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc.Natl.Acad.Sci.USA, 113, 2016
5JLT
DownloadVisualize
BU of 5jlt by Molmil
The crystal structure of the bacteriophage T4 MotA C-terminal domain in complex with dsDNA reveals a novel protein-DNA recognition motif
Descriptor: DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*TP*GP*CP*TP*TP*AP*AP*TP*AP*AP*TP*CP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*GP*AP*TP*TP*AP*TP*TP*AP*AP*GP*CP*AP*AP*AP*GP*CP*TP*TP*C)-3'), Middle transcription regulatory protein motA
Authors:Cuypers, M.G, Robertson, R.M, Knipling, L, Hinton, D.M, White, S.W.
Deposit date:2016-04-27
Release date:2017-05-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.955 Å)
Cite:The phage T4 MotA transcription factor contains a novel DNA binding motif that specifically recognizes modified DNA.
Nucleic Acids Res., 46, 2018
5JQ9
DownloadVisualize
BU of 5jq9 by Molmil
Yersinia pestis DHPS with pterine-sulfa conjugate Compound 16
Descriptor: 1,2-ETHANEDIOL, 4-{[(2-amino-4-oxo-3,4-dihydropteridin-6-yl)methyl]amino}-N-(3,4-dimethyl-1,2-oxazol-5-yl)benzene-1-sulfonamide, Dihydropteroate synthase
Authors:Wu, Y, White, S.W.
Deposit date:2016-05-04
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Pterin-sulfa conjugates as dihydropteroate synthase inhibitors and antibacterial agents.
Bioorg.Med.Chem.Lett., 26, 2016
7UQ1
DownloadVisualize
BU of 7uq1 by Molmil
The X-ray crystal structure of the N-terminal domain of Staphylococcus aureus Fatty Acid Kinase A (FakA, residues 1-208) in complex with AMP and a single Mg ion at the dinuclear binding site
Descriptor: ADENOSINE MONOPHOSPHATE, Fatty Acid Kinase A, GLYCEROL, ...
Authors:Cuypers, M.G, Subramanian, C, Seetharaman, J, Rock, C.O, White, S.W.
Deposit date:2022-04-18
Release date:2022-05-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Domain architecture and catalysis of the Staphylococcus aureus fatty acid kinase.
J.Biol.Chem., 298, 2022
5KYM
DownloadVisualize
BU of 5kym by Molmil
Crystal Structure of the 1-acyl-sn-glycerophosphate (LPA) acyltransferase, PlsC, from Thermotoga maritima
Descriptor: 1-HEPTADECANOYL-2-TRIDECANOYL-3-GLYCEROL-PHOSPHONYL CHOLINE, 1-acyl-sn-glycerol-3-phosphate acyltransferase, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Robertson, R.M, Yao, J, Gajewski, S, Kumar, G, Martin, E.W, Rock, C.O, White, S.W.
Deposit date:2016-07-21
Release date:2017-07-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A two-helix motif positions the lysophosphatidic acid acyltransferase active site for catalysis within the membrane bilayer.
Nat. Struct. Mol. Biol., 24, 2017
6O5N
DownloadVisualize
BU of 6o5n by Molmil
Tubulin-RB3_SLD-TTL in complex with compound 10ab
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2019-03-04
Release date:2019-07-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Structure-Guided Design, Synthesis, and Biological Evaluation of (2-(1H-Indol-3-yl)-1H-imidazol-4-yl)(3,4,5-trimethoxyphenyl) Methanone (ABI-231) Analogues Targeting the Colchicine Binding Site in Tubulin.
J.Med.Chem., 62, 2019
6O61
DownloadVisualize
BU of 6o61 by Molmil
Tubulin-RB3_SLD-TTL in complex with compound ABI-231
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2019-03-05
Release date:2019-07-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Structure-Guided Design, Synthesis, and Biological Evaluation of (2-(1H-Indol-3-yl)-1H-imidazol-4-yl)(3,4,5-trimethoxyphenyl) Methanone (ABI-231) Analogues Targeting the Colchicine Binding Site in Tubulin.
J.Med.Chem., 62, 2019
6PC4
DownloadVisualize
BU of 6pc4 by Molmil
Tubulin-RB3_SLD-TTL in complex with compound ABI-274
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2019-06-15
Release date:2020-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Structure-Activity Relationship Study of Novel 6-Aryl-2-benzoyl-pyridines as Tubulin Polymerization Inhibitors with Potent Antiproliferative Properties.
J.Med.Chem., 63, 2020
6V53
DownloadVisualize
BU of 6v53 by Molmil
The crystal structure of the 2009 H1N1 PA endonuclease mutant I38T in complex with SJ000985494
Descriptor: Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Cuypers, M.G, Slavish, P.J, Rankovic, Z, White, S.W.
Deposit date:2019-12-03
Release date:2020-12-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of the 2009 H1N1 PA endonuclease mutant I38T in complex with SJ000985494
To Be Published
1WHI
DownloadVisualize
BU of 1whi by Molmil
RIBOSOMAL PROTEIN L14
Descriptor: RIBOSOMAL PROTEIN L14
Authors:Davies, C, White, S.W, Ramakrishnan, V.
Deposit date:1996-01-10
Release date:1996-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatus.
Structure, 4, 1996
6VG9
DownloadVisualize
BU of 6vg9 by Molmil
The crystal structure of the 2009 H1N1/California PA endonuclease I38T mutant in complex with SJ000986248
Descriptor: Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Cuypers, M.G, Slavish, P.J, Rankovic, Z, White, S.W.
Deposit date:2020-01-07
Release date:2021-02-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential.
Eur.J.Med.Chem., 247, 2023
6V9E
DownloadVisualize
BU of 6v9e by Molmil
The crystal structure of the 2009 H1N1 PA endonuclease wild type in complex with SJ000988632
Descriptor: 1,1',1'',1''',1''''-[(3R,5S,7S,9R)-decane-1,3,5,7,9-pentayl]penta(pyrrolidin-2-one), MANGANESE (II) ION, N-[2-(6-amino-9H-purin-9-yl)ethyl]-5-hydroxy-6-oxo-2-[2-(trifluoromethyl)phenyl]-1,6-dihydropyrimidine-4-carboxamide, ...
Authors:Cuypers, M.G, Slavish, P.J, Rankovic, Z, White, S.W.
Deposit date:2019-12-13
Release date:2021-02-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential.
Eur.J.Med.Chem., 247, 2023
6VBR
DownloadVisualize
BU of 6vbr by Molmil
The crystal structure of the 2009 H1N1/California PA endonuclease wild type in complex with SJ000986248
Descriptor: Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Cuypers, M.G, Slavish, P.J, Rankovic, Z, White, S.W.
Deposit date:2019-12-19
Release date:2021-02-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential.
Eur.J.Med.Chem., 247, 2023

220113

數據於2024-05-22公開中

PDB statisticsPDBj update infoContact PDBjnumon