Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3DJL
DownloadVisualize
BU of 3djl by Molmil
Crystal structure of alkylation response protein E. coli AidB
Descriptor: CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, Protein aidB
Authors:Eichman, B.F, Metz, A.H, Bowles, T.
Deposit date:2008-06-23
Release date:2008-09-23
Last modified:2012-03-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and DNA binding of alkylation response protein AidB.
Proc.Natl.Acad.Sci.USA, 105, 2008
3EFV
DownloadVisualize
BU of 3efv by Molmil
Crystal Structure of a Putative Succinate-Semialdehyde Dehydrogenase from Salmonella typhimurium LT2 with bound NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative succinate-semialdehyde dehydrogenase
Authors:Brunzelle, J.S, Evdokimova, E, Kudritska, M, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-09-10
Release date:2008-11-04
Last modified:2013-06-12
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and activity of the NAD(P)(+) -dependent succinate semialdehyde dehydrogenase YneI from Salmonella typhimurium.
Proteins, 81, 2013
3H2Y
DownloadVisualize
BU of 3h2y by Molmil
Crystal structure of YqeH GTPase from Bacillus anthracis with dGDP bound
Descriptor: 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE, GTPase family protein
Authors:Brunzelle, J.S, Anderson, S.M, Xu, X, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-04-15
Release date:2009-06-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of YqeH GTPase from Bacillus anthracis with dGDP Bound
To be Published
8SMQ
DownloadVisualize
BU of 8smq by Molmil
Crystal Structure of the N-terminal Domain of the Cryptic Surface Protein (CD630_25440) from Clostridium difficile.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Minasov, G, Shuvalova, L, Brunzelle, J.S, Kiryukhina, O, Wawrzak, Z, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2023-04-26
Release date:2023-05-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein target highlights in CASP15: Analysis of models by structure providers.
Proteins, 91, 2023
8SS0
DownloadVisualize
BU of 8ss0 by Molmil
Human sterol 14 alpha-demethylase (CYP51) in complex with the reaction intermediate 14 alpha-aldehyde dihydrolanosterol
Descriptor: 3beta-hydroxy-10alpha,13alpha-lanosta-8,24-dien-30-al, Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hargrove, T.Y, Wawrzak, Z, Guengerich, F.P, Lepesheva, G.I.
Deposit date:2023-05-08
Release date:2024-01-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Oxygen-18 Labeling Reveals a Mixed Fe-O Mechanism in the Last Step of Cytochrome P450 51 Sterol 14 alpha-Demethylation.
Angew.Chem.Int.Ed.Engl., 63, 2024
5VOL
DownloadVisualize
BU of 5vol by Molmil
Bacint_04212 ferulic acid esterase
Descriptor: CALCIUM ION, ISOPROPYL ALCOHOL, Putative esterase
Authors:Koropatkin, N.M, Cann, I, Mackie, R.I.
Deposit date:2017-05-03
Release date:2017-07-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Biochemical and Structural Analyses of Two Cryptic Esterases in Bacteroides intestinalis and their Synergistic Activities with Cognate Xylanases.
J. Mol. Biol., 429, 2017
5F47
DownloadVisualize
BU of 5f47 by Molmil
Crystal structure of an aminoglycoside acetyltransferase meta-AAC0020 from an uncultured soil metagenomic sample in complex with trehalose
Descriptor: CALCIUM ION, CHLORIDE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose, ...
Authors:Xu, Z, Skarina, T, Wawrzak, Z, Stogios, P.J, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-03
Release date:2015-12-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.497 Å)
Cite:Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes.
ACS Infect Dis, 3, 2017
5U08
DownloadVisualize
BU of 5u08 by Molmil
Crystal structure of an aminoglycoside acetyltransferase meta-AAC0020 from an uncultured soil metagenomic sample in complex with sisomicin
Descriptor: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, ACETATE ION, CALCIUM ION, ...
Authors:Xu, Z, Skarina, T, Wawrzak, Z, Stogios, P.J, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-11-23
Release date:2017-02-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes.
ACS Infect Dis, 3, 2017
5HT0
DownloadVisualize
BU of 5ht0 by Molmil
Crystal structure of an Antibiotic_NAT family aminoglycoside acetyltransferase HMB0038 from an uncultured soil metagenomic sample in complex with coenzyme A
Descriptor: Aminoglycoside acetyltransferase HMB0005, COENZYME A, SULFATE ION
Authors:Xu, Z, Stogios, P.J, Wawrzak, Z, Skarina, T, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-01-26
Release date:2016-03-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.752 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
5HMN
DownloadVisualize
BU of 5hmn by Molmil
Crystal structure of an aminoglycoside acetyltransferase HMB0005 from an uncultured soil metagenomic sample, unknown active site density modeled as polyethylene glycol
Descriptor: AAC3-I, COENZYME A, TETRAETHYLENE GLYCOL
Authors:Xu, Z, Stogios, P.J, Wawrzak, Z, Skarina, T, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-01-16
Release date:2016-02-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.018 Å)
Cite:Crystal structure of an aminoglycoside acetyltransferase HMB0005 from an uncultured soil metagenomic sample, unknown active site density modeled as polyethylene glycol
To Be Published
6M9U
DownloadVisualize
BU of 6m9u by Molmil
Structure of the apo-form of 20beta-Hydroxysteroid Dehydrogenase from Bifidobacterium adolescentis strain L2-32
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Mythen, S.M, Pollet, R.M, Koropatkin, N.M, Ridlon, J.M.
Deposit date:2018-08-24
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and biochemical characterization of 20 beta-hydroxysteroid dehydrogenase fromBifidobacterium adolescentisstrain L2-32.
J.Biol.Chem., 294, 2019
6NAU
DownloadVisualize
BU of 6nau by Molmil
1.55 Angstrom Resolution Crystal Structure of 6-phosphogluconolactonase from Klebsiella pneumoniae
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-phosphogluconolactonase, CHLORIDE ION
Authors:Minasov, G, Shuvalova, L, Pshenychnyi, S, Dubrovska, I, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-12-06
Release date:2018-12-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
6NBG
DownloadVisualize
BU of 6nbg by Molmil
2.05 Angstrom Resolution Crystal Structure of Hypothetical Protein KP1_5497 from Klebsiella pneumoniae.
Descriptor: CHLORIDE ION, Glucosamine-6-phosphate deaminase, PHOSPHATE ION
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-12-07
Release date:2018-12-19
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
6OW4
DownloadVisualize
BU of 6ow4 by Molmil
Structure of the NADH-bound form of 20beta-Hydroxysteroid Dehydrogenase from Bifidobacterium adolescentis strain L2-32
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Oxidoreductase, short chain dehydrogenase/reductase family protein
Authors:Mythen, S.M, Pollet, R.M, Koropatkin, N.M, Ridlon, J.M.
Deposit date:2019-05-09
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural and biochemical characterization of 20 beta-hydroxysteroid dehydrogenase fromBifidobacterium adolescentisstrain L2-32.
J.Biol.Chem., 294, 2019
6B82
DownloadVisualize
BU of 6b82 by Molmil
Zebra Fish CYP-450 17A1 Mutant Abiraterone Complex
Descriptor: ACETATE ION, Abiraterone, CHLORIDE ION, ...
Authors:Pallan, P.S, Egli, M.
Deposit date:2017-10-05
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Inherent steroid 17 alpha ,20-lyase activity in defunct cytochrome P450 17A enzymes.
J. Biol. Chem., 293, 2018
6WQB
DownloadVisualize
BU of 6wqb by Molmil
Crystal structure of VipF from Legionella hackeliae in complex with acetyl-CoA
Descriptor: ACETYL COENZYME *A, N-terminal acetyltransferase, GNAT family
Authors:Stogios, P.J, Skarina, T, Wawrzak, Z, Sandoval, J, Di Leo, R, Savchenko, A.
Deposit date:2020-04-28
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of VipF from Legionella hackeliae in complex with acetyl-CoA
To Be Published
6WQC
DownloadVisualize
BU of 6wqc by Molmil
Crystal structure of VipF from Legionella hackeliae in complex with CoA
Descriptor: COENZYME A, N-terminal acetyltransferase, GNAT family
Authors:Stogios, P.J, Skarina, T, Wawrzak, Z, Sandoval, J, Di Leo, R, Savchenko, A.
Deposit date:2020-04-28
Release date:2021-11-10
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structure of VipF from Legionella hackeliae in complex with CoA
To Be Published
3IHS
DownloadVisualize
BU of 3ihs by Molmil
Crystal Structure of a Phosphocarrier Protein HPr from Bacillus anthracis str. Ames
Descriptor: Phosphocarrier protein HPr
Authors:Brunzelle, J.S, Anderson, S.M, Skarina, T, Onopriyenko, O, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-07-30
Release date:2009-08-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal Structure of a Phosphocarrier Protein HPr from Bacillus anthracis str. Ames
To be Published
3LG3
DownloadVisualize
BU of 3lg3 by Molmil
1.4A Crystal Structure of Isocitrate Lyase from Yersinia pestis CO92
Descriptor: Isocitrate lyase
Authors:Sharma, S.S, Brunzelle, J.S, Skarina, T, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-01-19
Release date:2010-04-14
Last modified:2011-12-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:1.4A Crystal Structure of Isocitrate Lyase from Yersinia pestis CO92
To be Published
4R20
DownloadVisualize
BU of 4r20 by Molmil
Zebra fish cytochrome P450 17A2 with Abiraterone
Descriptor: Abiraterone, Cytochrome P450 family 17 polypeptide 2, MERCURY (II) ION, ...
Authors:Pallan, P.S, Egli, M.
Deposit date:2014-08-08
Release date:2014-12-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural and Kinetic Basis of Steroid 17 alpha, 20-Lyase Activity in Teleost Fish Cytochrome P450 17A1 and Its Absence in Cytochrome P450 17A2.
J.Biol.Chem., 290, 2015
4R21
DownloadVisualize
BU of 4r21 by Molmil
Zebra fish cytochrome P450 17A2 with Progesterone
Descriptor: Cytochrome P450 family 17 polypeptide 2, PROGESTERONE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pallan, P.S, Egli, M.
Deposit date:2014-08-08
Release date:2014-12-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Kinetic Basis of Steroid 17 alpha, 20-Lyase Activity in Teleost Fish Cytochrome P450 17A1 and Its Absence in Cytochrome P450 17A2.
J.Biol.Chem., 290, 2015
4FS1
DownloadVisualize
BU of 4fs1 by Molmil
Base pairing mechanism of N2,3-ethenoguanine with dTTP by human polymerase iota
Descriptor: DNA 5'-D(*TP*CP*TP*(EFG)P*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*(DOC))-3', DNA polymerase iota, MAGNESIUM ION, ...
Authors:Zhao, L.
Deposit date:2012-06-26
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Basis of Miscoding of the DNA Adduct N2,3-Ethenoguanine by Human Y-family DNA Polymerases.
J.Biol.Chem., 287, 2012
4R1Z
DownloadVisualize
BU of 4r1z by Molmil
Zebra fish cytochrome P450 17A1 with Abiraterone
Descriptor: Abiraterone, Cyp17a1 protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pallan, P.S, Egli, M.
Deposit date:2014-08-08
Release date:2014-12-31
Last modified:2015-03-04
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural and Kinetic Basis of Steroid 17 alpha, 20-Lyase Activity in Teleost Fish Cytochrome P450 17A1 and Its Absence in Cytochrome P450 17A2.
J.Biol.Chem., 290, 2015
4FS2
DownloadVisualize
BU of 4fs2 by Molmil
Base pairing mechanism of N2,3-ethenoguanine with dCTP by human polymerase iota
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*TP*(EFG)P*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*(DOC))-3'), DNA polymerase iota, ...
Authors:Zhao, L.
Deposit date:2012-06-26
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Basis of Miscoding of the DNA Adduct N2,3-Ethenoguanine by Human Y-family DNA Polymerases.
J.Biol.Chem., 287, 2012
4TQS
DownloadVisualize
BU of 4tqs by Molmil
Ternary complex of Y-family DNA polymerase Dpo4 with (5'S)-8,5'-Cyclo-2'-deoxyguanosine and dCTP
Descriptor: 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3'), ...
Authors:Zhao, L.
Deposit date:2014-06-11
Release date:2015-01-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Kinetic and Structural Mechanisms of (5'S)-8,5'-Cyclo-2'-deoxyguanosine-Induced DNA Replication Stalling.
Biochemistry, 54, 2015

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon