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6ON1
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BU of 6on1 by Molmil
A resting state structure of L-DOPA dioxygenase from Streptomyces sclerotialus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, L-DOPA dioxygenase
Authors:Wang, Y, Shin, I, Fu, Y, Colabroy, K, Liu, A.
Deposit date:2019-04-19
Release date:2019-06-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.982 Å)
Cite:Crystal Structures of L-DOPA Dioxygenase fromStreptomyces sclerotialus.
Biochemistry, 58, 2019
3KCU
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BU of 3kcu by Molmil
Structure of formate channel
Descriptor: 2-(6-(2-CYCLOHEXYLETHOXY)-TETRAHYDRO-4,5-DIHYDROXY-2(HYDROXYMETHYL)-2H-PYRAN-3-YLOXY)-TETRAHYDRO-6(HYDROXYMETHYL)-2H-PY RAN-3,4,5-TRIOL, Probable formate transporter 1
Authors:Wang, Y, Huang, Y, Wang, J, Yan, N, Shi, Y.
Deposit date:2009-10-22
Release date:2009-12-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.243 Å)
Cite:Structure of the formate transporter FocA reveals a pentameric aquaporin-like channel
Nature, 462, 2009
3KCV
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BU of 3kcv by Molmil
Structure of formate channel
Descriptor: Probable formate transporter 1
Authors:Wang, Y, Huang, Y, Wang, J, Yan, N, Shi, Y.
Deposit date:2009-10-22
Release date:2009-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.198 Å)
Cite:Structure of the formate transporter FocA reveals a pentameric aquaporin-like channel
Nature, 462, 2009
9IOX
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BU of 9iox by Molmil
Cryo-EM structure of a TEF30-associated intermediate PSII core dimer complex, type II, from Chlamydomonas reinhardtii
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Wang, Y, Wang, C, Li, A, Liu, Z.
Deposit date:2024-07-09
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:TEF30 fulfills versatile functions in the photosystem II repair process
To Be Published
9IMN
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BU of 9imn by Molmil
Cryo-EM structure of a TEF30-associated intermediate PSII core dimer complex, type I, from Chlamydomonas reinhardtii
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Wang, Y, Wang, C, Li, A, Liu, Z.
Deposit date:2024-07-03
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:TEF30 fulfills versatile functions in the photosystem II repair process
To Be Published
9IIU
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BU of 9iiu by Molmil
Cryo-EM structure of an TEF30-associated intermediate PSII core complex from Chlamydomonas reinhardtii
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Wang, Y, Wang, C, Li, A, Liu, Z.
Deposit date:2024-06-21
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:TEF30 fulfills versatile functions in the photosystem II repair process
To Be Published
9IS4
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BU of 9is4 by Molmil
Cryo-EM structure of a TEF30-associated intermediate C2S-type PSII-LHCII supercomplex from Chlamydomonas reinhardtii
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Wang, Y, Wang, C, Li, A, Liu, Z.
Deposit date:2024-07-16
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:TEF30 fulfills versatile functions in the photosystem II repair process
To Be Published
7REI
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BU of 7rei by Molmil
The crystal structure of nickel bound human ADO C18S C239S variant
Descriptor: 2-aminoethanethiol dioxygenase, GLYCEROL, NICKEL (II) ION
Authors:Wang, Y, Shin, I, Li, J, Liu, A.
Deposit date:2021-07-12
Release date:2021-09-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of human cysteamine dioxygenase provides a structural rationale for its function as an oxygen sensor.
J.Biol.Chem., 297, 2021
6VI8
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BU of 6vi8 by Molmil
Observing a ring-cleaving dioxygenase in action through a crystalline lens - a superoxo bound structure
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-HYDROXYANTHRANILIC ACID, 3-hydroxyanthranilate 3,4-dioxygenase, ...
Authors:Wang, Y, Liu, F, Yang, Y, Liu, A.
Deposit date:2020-01-12
Release date:2020-07-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Observing 3-hydroxyanthranilate-3,4-dioxygenase in action through a crystalline lens.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VI6
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BU of 6vi6 by Molmil
Observing a ring-cleaving dioxygenase in action through a crystalline lens - a substrate monodentately bound structure
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-HYDROXYANTHRANILIC ACID, 3-hydroxyanthranilate 3,4-dioxygenase, ...
Authors:Wang, Y, Liu, F, Yang, Y, Liu, A.
Deposit date:2020-01-12
Release date:2020-07-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Observing 3-hydroxyanthranilate-3,4-dioxygenase in action through a crystalline lens.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VI7
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BU of 6vi7 by Molmil
Probing extradiol dioxygenase mechanism in NAD(+) biosynthesis by viewing reaction cycle intermediates - a substrate bidentately bound structure
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-HYDROXYANTHRANILIC ACID, 3-hydroxyanthranilate 3,4-dioxygenase, ...
Authors:Wang, Y, Liu, F, Yang, Y, Liu, A.
Deposit date:2020-01-12
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.617 Å)
Cite:Observing 3-hydroxyanthranilate-3,4-dioxygenase in action through a crystalline lens.
Proc.Natl.Acad.Sci.USA, 117, 2020
9K3Z
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BU of 9k3z by Molmil
Cryo-EM structure of Arabidopsis thaliana H2A.Z-nucleosome with Arabidopsis native 147bp DNA 15.2.2 (C2 symmetry)
Descriptor: 15.2.2 DNA (147-MER), Histone H2B.1, Histone H3.1, ...
Authors:Wang, Y, Dong, A.
Deposit date:2024-10-21
Release date:2025-05-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Structural and functional interrelationships of histone H2A with its variants H2A.Z and H2A.W in Arabidopsis.
Structure, 2025
9K40
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BU of 9k40 by Molmil
Cryo-EM structure of Arabidopsis thaliana H2A-nucleosome with Arabidopsis native 147bp DNA 15.2.2 (C2 symmetry)
Descriptor: 15.2.2 DNA (147-MER), Histone H2A.6, Histone H2B.1, ...
Authors:Wang, Y, Dong, A.
Deposit date:2024-10-21
Release date:2025-05-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural and functional interrelationships of histone H2A with its variants H2A.Z and H2A.W in Arabidopsis.
Structure, 2025
9K41
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BU of 9k41 by Molmil
Cryo-EM structure of Arabidopsis thaliana H2A.W-nucleosome with Arabidopsis native 147bp DNA 15.2.2 (C2 symmetry)
Descriptor: 15.2.2 DNA (147-MER), Histone H2B.1, Histone H3.1, ...
Authors:Wang, Y, Dong, A.
Deposit date:2024-10-21
Release date:2025-05-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Structural and functional interrelationships of histone H2A with its variants H2A.Z and H2A.W in Arabidopsis.
Structure, 2025
9K42
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BU of 9k42 by Molmil
Cryo-EM structure of Arabidopsis thaliana H2A-nucleosome with 147bp Widom 601 DNA (C2 symmetry)
Descriptor: Histone H2A.6, Histone H2B.1, Histone H3.1, ...
Authors:Wang, Y, Dong, A.
Deposit date:2024-10-21
Release date:2025-05-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structural and functional interrelationships of histone H2A with its variants H2A.Z and H2A.W in Arabidopsis.
Structure, 2025
9K43
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BU of 9k43 by Molmil
Cryo-EM structure of Arabidopsis thaliana H2A.Z-nucleosome with 147bp Widom 601 DNA (C2 symmetry)
Descriptor: Histone H2B.1, Histone H3.1, Histone H4, ...
Authors:Wang, Y, Dong, A.
Deposit date:2024-10-21
Release date:2025-05-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Structural and functional interrelationships of histone H2A with its variants H2A.Z and H2A.W in Arabidopsis.
Structure, 2025
8GAP
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BU of 8gap by Molmil
Structure of LARP7 protein p65-telomerase RNA complex in telomerase
Descriptor: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ...
Authors:Wang, Y, He, Y, Wang, Y, Yang, Y, Singh, M, Eichhorn, C.D, Zhou, Z.H, Feigon, J.
Deposit date:2023-02-23
Release date:2023-06-28
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of LARP7 Protein p65-telomerase RNA Complex in Telomerase Revealed by Cryo-EM and NMR.
J.Mol.Biol., 435, 2023
9IVD
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BU of 9ivd by Molmil
Cryo-EM structure of CyclinD1 bound AMBRA1-DDB1
Descriptor: Activating molecule in BECN1-regulated autophagy protein 1, DNA damage-binding protein 1, G1/S-specific cyclin-D1
Authors:Wang, Y, Liu, M, Su, M.-Y, Stjepanovic, G.
Deposit date:2024-07-23
Release date:2025-04-23
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Mechanism of D-type cyclins recognition by the AMBRA1 E3 ligase receptor
To Be Published
3TDL
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BU of 3tdl by Molmil
Structure of human serum albumin in complex with DAUDA
Descriptor: 11-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)undecanoic acid, MYRISTIC ACID, Serum albumin
Authors:Wang, Y, Luo, Z, Shi, X, Wang, H, Nie, L.
Deposit date:2011-08-11
Release date:2012-06-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A fluorescent fatty acid probe, DAUDA, selectively displaces two myristates bound in human serum albumin
Protein Sci., 20, 2011
9IID
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BU of 9iid by Molmil
Crystal structure of PgAfp
Descriptor: Antifungal protein B
Authors:Wang, Y.
Deposit date:2024-06-20
Release date:2024-07-10
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The role of Npt1 in regulating antifungal protein activity in filamentous fungi.
Nat Commun, 16, 2025
3K62
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BU of 3k62 by Molmil
Crystal structure of FBF-2/gld-1 FBEb complex
Descriptor: 5'-R(*UP*GP*UP*GP*UP*UP*AP*UP*C)-3', Fem-3 mRNA-binding factor 2
Authors:Wang, Y, Opperman, L, Wickens, M, Hall, T.M.T.
Deposit date:2009-10-08
Release date:2009-11-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein.
Proc.Natl.Acad.Sci.USA, 106, 2009
3K5Q
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BU of 3k5q by Molmil
Crystal structure of FBF-2/FBE complex
Descriptor: 5'-R(P*UP*GP*UP*AP*CP*UP*AP*UP*A)-3', Fem-3 mRNA-binding factor 2
Authors:Wang, Y, Opperman, L, Wickens, M, Hall, T.M.T.
Deposit date:2009-10-07
Release date:2009-11-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein.
Proc.Natl.Acad.Sci.USA, 106, 2009
3K5Z
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BU of 3k5z by Molmil
Crystal structure of FBF-2/gld-1 FBEa G4A mutant complex
Descriptor: 5'-R(*UP*GP*UP*AP*CP*CP*AP*UP*A)-3', Fem-3 mRNA-binding factor 2
Authors:Wang, Y, Opperman, L, Wickens, M, Hall, T.M.T.
Deposit date:2009-10-08
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein.
Proc.Natl.Acad.Sci.USA, 106, 2009
3K64
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BU of 3k64 by Molmil
Crystal structure of FBF-2/fem-3 PME complex
Descriptor: 5'-R(*UP*GP*UP*GP*UP*CP*AP*UP*U)-3', Fem-3 mRNA-binding factor 2
Authors:Wang, Y, Opperman, L, Wickens, M, Hall, T.M.T.
Deposit date:2009-10-08
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein.
Proc.Natl.Acad.Sci.USA, 106, 2009
5GSW
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BU of 5gsw by Molmil
Crystal structure of EV71 3C in complex with N69S 1.8k
Descriptor: 3C protein, ~{N}-[(2~{S})-3-(4-fluorophenyl)-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]propan-2-yl]-5-methyl-1,2-oxazole-3-carboxamide
Authors:Wang, Y.
Deposit date:2016-08-17
Release date:2017-05-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Structure of the Enterovirus 71 3C Protease in Complex with NK-1.8k and Indications for the Development of Antienterovirus Protease Inhibitor
Antimicrob. Agents Chemother., 61, 2017

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