Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7S7K
DownloadVisualize
BU of 7s7k by Molmil
Crystal structure of the EphB2 extracellular domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ephrin type-B receptor 2, ...
Authors:Xu, Y, Xu, K, Nikolov, D.B.
Deposit date:2021-09-16
Release date:2021-10-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:The Ephb2 Receptor Uses Homotypic, Head-to-Tail Interactions within Its Ectodomain as an Autoinhibitory Control Mechanism.
Int J Mol Sci, 22, 2021
7S5C
DownloadVisualize
BU of 7s5c by Molmil
M. xanthus ferritin-like protein EncB
Descriptor: CALCIUM ION, EncB, FE (III) ION
Authors:Eren, E.
Deposit date:2021-09-10
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural characterization of the Myxococcus xanthus encapsulin and ferritin-like cargo system gives insight into its iron storage mechanism.
Structure, 30, 2022
7S5K
DownloadVisualize
BU of 7s5k by Molmil
M. xanthus ferritin-like protein EncB
Descriptor: CALCIUM ION, EncB, FE (III) ION
Authors:Eren, E.
Deposit date:2021-09-10
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural characterization of the Myxococcus xanthus encapsulin and ferritin-like cargo system gives insight into its iron storage mechanism.
Structure, 30, 2022
3W95
DownloadVisualize
BU of 3w95 by Molmil
Crystal structure of 2A proteinase (C110A) from enterovirus 71
Descriptor: Genome polyprotein, ZINC ION
Authors:Mu, Z, Gao, X, Cui, S.
Deposit date:2013-03-27
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of 2A Proteinase from Hand, Foot and Mouth Disease Virus
J.Mol.Biol., 425, 2013
6WTE
DownloadVisualize
BU of 6wte by Molmil
Structure of radical S-adenosylmethionine methyltransferase, TsrM, from Kitasatospora setae with cobalamin and [4Fe-4S] cluster bound
Descriptor: 1,2-ETHANEDIOL, B12-binding domain-containing protein, COBALAMIN, ...
Authors:Knox, H.L, Chen, P.Y.-T, Drennan, C.L, Booker, S.J.
Deposit date:2020-05-02
Release date:2020-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural basis for non-radical catalysis by TsrM, a radical SAM methylase.
Nat.Chem.Biol., 17, 2021
6WTF
DownloadVisualize
BU of 6wtf by Molmil
Structure of radical S-adenosylmethionine methyltransferase, TsrM, from Kitasatospora setae with tryptophan substrate and SAM analog (aza-SAM) bound
Descriptor: COBALAMIN, IRON/SULFUR CLUSTER, S-5'-AZAMETHIONINE-5'-DEOXYADENOSINE, ...
Authors:Knox, H.L, Chen, P.Y.-T, Drennan, C.L, Booker, S.J.
Deposit date:2020-05-02
Release date:2020-12-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural basis for non-radical catalysis by TsrM, a radical SAM methylase.
Nat.Chem.Biol., 17, 2021
6WG9
DownloadVisualize
BU of 6wg9 by Molmil
Crystal structure of tetracycline destructase Tet(X7)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Tetracycline destructase Tet(X7)
Authors:Kumar, H, Tolia, N.H.
Deposit date:2020-04-05
Release date:2021-02-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Tetracycline-inactivating enzymes from environmental, human commensal, and pathogenic bacteria cause broad-spectrum tetracycline resistance.
Commun Biol, 3, 2020
4KTC
DownloadVisualize
BU of 4ktc by Molmil
NS3/NS4A protease with inhibitor
Descriptor: (2R,6S,13aR,14aR,16aS)-6-{[(cyclopentyloxy)carbonyl]amino}-14a-[(cyclopropylsulfonyl)carbamoyl]-5,16-dioxooctadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-2-yl 3,4-dihydroisoquinoline-2(1H)-carboxylate, NS4A peptide, Serine protease NS3, ...
Authors:Zhang, H, Ballard, J, Vigers, G.P.A, Brandhuber, B.J.
Deposit date:2013-05-20
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of Danoprevir (ITMN-191/R7227), a Highly Selective and Potent Inhibitor of Hepatitis C Virus (HCV) NS3/4A Protease.
J.Med.Chem., 57, 2014
5TBM
DownloadVisualize
BU of 5tbm by Molmil
Crystal structure of PT2385 bound to HIF2a-B*:ARNT-B* complex
Descriptor: 3-{[(1S)-2,2-difluoro-1-hydroxy-7-(methylsulfonyl)-2,3-dihydro-1H-inden-4-yl]oxy}-5-fluorobenzonitrile, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1
Authors:Du, X.
Deposit date:2016-09-12
Release date:2016-09-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Small-Molecule Antagonist of HIF2 alpha Is Efficacious in Preclinical Models of Renal Cell Carcinoma.
Cancer Res., 76, 2016
5U39
DownloadVisualize
BU of 5u39 by Molmil
Pseudomonas aeruginosa LpxC in complex with CHIR-090
Descriptor: N-{(1S,2R)-2-hydroxy-1-[(hydroxyamino)carbonyl]propyl}-4-{[4-(morpholin-4-ylmethyl)phenyl]ethynyl}benzamide, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION
Authors:Sprague, E.R.
Deposit date:2016-12-01
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Design, Synthesis, and Properties of a Potent Inhibitor of Pseudomonas aeruginosa Deacetylase LpxC.
J. Med. Chem., 60, 2017
5U3B
DownloadVisualize
BU of 5u3b by Molmil
Pseudomonas aeruginosa LpxC in complex with NVS-LPXC-01
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, N-[(2S)-3-amino-1-(hydroxyamino)-3-methyl-1-oxobutan-2-yl]-4-[(but-2-yn-1-yl)oxy]benzamide, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ...
Authors:Sprague, E.R.
Deposit date:2016-12-01
Release date:2017-06-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design, Synthesis, and Properties of a Potent Inhibitor of Pseudomonas aeruginosa Deacetylase LpxC.
J. Med. Chem., 60, 2017
3C4Z
DownloadVisualize
BU of 3c4z by Molmil
Crystal structure of G protein coupled receptor kinase 1 bound to ADP and magnesium chloride at 1.84A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Singh, P, Tesmer, J.J.G.
Deposit date:2008-01-30
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structures of rhodopsin kinase in different ligand states reveal key elements involved in G protein-coupled receptor kinase activation.
J.Biol.Chem., 283, 2008
3C4W
DownloadVisualize
BU of 3c4w by Molmil
Crystal Structure of G protein coupled receptor kinase 1 bound to ATP and magnesium chloride at 2.7A
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Singh, P, Tesmer, J.J.G.
Deposit date:2008-01-30
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of rhodopsin kinase in different ligand states reveal key elements involved in G protein-coupled receptor kinase activation.
J.Biol.Chem., 283, 2008
3C50
DownloadVisualize
BU of 3c50 by Molmil
Crystal Structure of G protein coupled receptor kinase 1 bound to ADP and magnesium chloride at 2.6A
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Singh, P, Tesmer, J.J.G.
Deposit date:2008-01-30
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of rhodopsin kinase in different ligand states reveal key elements involved in G protein-coupled receptor kinase activation.
J.Biol.Chem., 283, 2008
3C4Y
DownloadVisualize
BU of 3c4y by Molmil
Crystal Structure of Apo form of G protein coupled receptor kinase 1 at 7.51A
Descriptor: Rhodopsin kinase
Authors:Singh, P, Tesmer, J.J.G.
Deposit date:2008-01-30
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (7.509 Å)
Cite:Structures of rhodopsin kinase in different ligand states reveal key elements involved in G protein-coupled receptor kinase activation.
J.Biol.Chem., 283, 2008
3C51
DownloadVisualize
BU of 3c51 by Molmil
Crystal structure of G protein coupled receptor kinase 1 bound to ADP and magnesium chloride at 3.55A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BROMIDE ION, MAGNESIUM ION, ...
Authors:Singh, P, Tesmer, J.J.G.
Deposit date:2008-01-30
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Structures of rhodopsin kinase in different ligand states reveal key elements involved in G protein-coupled receptor kinase activation.
J.Biol.Chem., 283, 2008
3C4X
DownloadVisualize
BU of 3c4x by Molmil
Crystal Structure of G protein coupled receptor kinase 1 bound to ATP and magnesium chloride at 2.9A
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Singh, P, Tesmer, J.J.G.
Deposit date:2008-01-30
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of rhodopsin kinase in different ligand states reveal key elements involved in G protein-coupled receptor kinase activation.
J.Biol.Chem., 283, 2008
7F18
DownloadVisualize
BU of 7f18 by Molmil
Crystal Structure of a mutant of acid phosphatase from Pseudomonas aeruginosa (Q57H/W58P/D135R)
Descriptor: Acid phosphatase
Authors:Xu, X, Hou, X.D, Song, W, Yin, D.J, Rao, Y.J, Liu, L.M.
Deposit date:2021-06-08
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Local Electric Field Modulated Reactivity of Pseudomonas aeruginosa Acid Phosphatase for Enhancing Phosphorylation of l-Ascorbic Acid
Acs Catalysis, 11, 2021
7F17
DownloadVisualize
BU of 7f17 by Molmil
Crystal Structure of acid phosphatase
Descriptor: Acid phosphatase
Authors:Xu, X, Hou, X.D, Song, W, Rao, Y.J, Liu, L.M, Wu, J.
Deposit date:2021-06-08
Release date:2021-10-27
Last modified:2022-05-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Local Electric Field Modulated Reactivity of Pseudomonas aeruginosa Acid Phosphatase for Enhancing Phosphorylation of l-Ascorbic Acid
Acs Catalysis, 11, 2021
7WKH
DownloadVisualize
BU of 7wkh by Molmil
the grass carp IFNa
Descriptor: Interferon
Authors:Zou, J, WANG, J, Wang, Z.
Deposit date:2022-01-09
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural and Functional Analyses of Type I IFNa Shed Light Into Its Interaction With Multiple Receptors in Fish.
Front Immunol, 13, 2022
7X45
DownloadVisualize
BU of 7x45 by Molmil
Grass carp interferon gamma related
Descriptor: Interferon gamma
Authors:Wang, J, Zou, J, Zhu, X.
Deposit date:2022-03-02
Release date:2022-09-14
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Novel Dimeric Architecture of an IFN-gamma-Related Cytokine Provides Insights into Subfunctionalization of Type II IFNs in Teleost Fish.
J Immunol., 209, 2022
7BEM
DownloadVisualize
BU of 7bem by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 scFv
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, COVOX-269 Vh domain, ...
Authors:Zhou, D, Zhao, Y, Ren, J, Stuart, D.
Deposit date:2020-12-24
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:The antigenic anatomy of SARS-CoV-2 receptor binding domain.
Cell, 184, 2021
7BEH
DownloadVisualize
BU of 7beh by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, COVOX-316 heavy chain, ...
Authors:Zhou, D, Zhao, Y, Ren, J, Stuart, D.
Deposit date:2020-12-23
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The antigenic anatomy of SARS-CoV-2 receptor binding domain.
Cell, 184, 2021
7BEN
DownloadVisualize
BU of 7ben by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-253 and COVOX-75 Fabs
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, BROMIDE ION, ...
Authors:Zhou, D, Zhao, Y, Ren, J, Stuart, D.
Deposit date:2020-12-24
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The antigenic anatomy of SARS-CoV-2 receptor binding domain.
Cell, 184, 2021
7BEP
DownloadVisualize
BU of 7bep by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-384 and S309 Fabs
Descriptor: CHLORIDE ION, COVOX-384 heavy chain, COVOX-384 light chain, ...
Authors:Zhou, D, Zhao, Y, Ren, J, Stuart, D.
Deposit date:2020-12-24
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:The antigenic anatomy of SARS-CoV-2 receptor binding domain.
Cell, 184, 2021

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon