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5W7I
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BU of 5w7i by Molmil
X-ray structure of ankyrin repeat domain of DHHC17 in complex with Snap25b peptide
Descriptor: Palmitoyltransferase ZDHHC17, Snap25b-111-120
Authors:Verardi, R, Kim, J.-S, Ghirlando, R, Banerjee, A.
Deposit date:2017-06-20
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.105 Å)
Cite:Structural Basis for Substrate Recognition by the Ankyrin Repeat Domain of Human DHHC17 Palmitoyltransferase.
Structure, 25, 2017
5W7J
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BU of 5w7j by Molmil
X-ray structure of the E89A variant of ankyrin repeat domain of DHHC17 in complex with Snap25b peptide
Descriptor: Palmitoyltransferase ZDHHC17, Snap25b-111-120
Authors:Verardi, R, Kim, J.-S, Ghirlando, R, Banerjee, A.
Deposit date:2017-06-20
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Structural Basis for Substrate Recognition by the Ankyrin Repeat Domain of Human DHHC17 Palmitoyltransferase.
Structure, 25, 2017
2KYV
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BU of 2kyv by Molmil
Hybrid solution and solid-state NMR structure ensemble of phospholamban pentamer
Descriptor: Phospholamban
Authors:Verardi, R, Shi, L, Traaseth, N.J, Veglia, G.
Deposit date:2010-06-08
Release date:2011-05-11
Last modified:2024-05-01
Method:SOLID-STATE NMR, SOLUTION NMR
Cite:Structural topology of phospholamban pentamer in lipid bilayers by a hybrid solution and solid-state NMR method.
Proc.Natl.Acad.Sci.USA, 108, 2011
6N8D
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BU of 6n8d by Molmil
Crystal structure of GII.4 2002 norovirus P domain in complex with neutralizing human antibody A1431
Descriptor: A1431 Fab heavy chain, A1431 Fab light chain, Major capsid protein
Authors:Changela, A, Verardi, R, Kwong, P.D.
Deposit date:2018-11-29
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Sera Antibody Repertoire Analyses Reveal Mechanisms of Broad and Pandemic Strain Neutralizing Responses after Human Norovirus Vaccination.
Immunity, 50, 2019
2KB7
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BU of 2kb7 by Molmil
Hybrid solution and solid-state NMR structure of monomeric phospholamban in lipid bilayers
Descriptor: Phospholamban
Authors:Traaseth, N.J, Shi, L, Verardi, R, Veglia, G.
Deposit date:2008-11-21
Release date:2009-06-16
Last modified:2024-05-22
Method:SOLID-STATE NMR, SOLUTION NMR
Cite:Structure and topology of monomeric phospholamban in lipid membranes determined by a hybrid solution and solid-state NMR approach.
Proc.Natl.Acad.Sci.USA, 106, 2009
2M3B
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BU of 2m3b by Molmil
Serine 16 phosphorylated phospholamban pentamer, Hybrid solution and solid-state NMR structural ensemble
Descriptor: Cardiac phospholamban
Authors:Vostrikov, V.V, Verardi, R, Veglia, G.
Deposit date:2013-01-15
Release date:2013-10-30
Last modified:2023-06-14
Method:SOLID-STATE NMR, SOLUTION NMR
Cite:Structural Dynamics and Topology of Phosphorylated Phospholamban Homopentamer Reveal Its Role in the Regulation of Calcium Transport.
Structure, 21, 2013
6N81
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BU of 6n81 by Molmil
Crystal structure of GII.4 2002 norovirus P domain in complex with cross-reactive human antibody A1227
Descriptor: A1227 Fab heavy chain, A1227 Fab light chain, Major capsid protein
Authors:Changela, A, Verardi, R, Kwong, P.D.
Deposit date:2018-11-28
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.579 Å)
Cite:Sera Antibody Repertoire Analyses Reveal Mechanisms of Broad and Pandemic Strain Neutralizing Responses after Human Norovirus Vaccination.
Immunity, 50, 2019
8DEQ
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BU of 8deq by Molmil
Cryo-EM local refinement of antibody SKV09 in complex with VEEV alphavirus spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SKV09 Fab Heavy Chain, SKV09 Fab Light Chain, ...
Authors:Casner, R.G, Verardi, R, Roederer, M, Shapiro, L.
Deposit date:2022-06-21
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8DER
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BU of 8der by Molmil
Cryo-EM local refinement of antibody SKV16 in complex with VEEV alphavirus spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SKV16 Fab Heavy Chain, ...
Authors:Casner, R.G, Verardi, R, Roederer, M, Shapiro, L.
Deposit date:2022-06-21
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8D9Y
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BU of 8d9y by Molmil
Crystal structure of Taipan alpha-neurotoxin in complex with Centi-3FTX-D09 antibody
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Centi-3FTX-D09 Fab heavy chain, ...
Authors:Pletnev, S, Verardi, R, Tully, E.S, Glanville, J, Kwong, P.D.
Deposit date:2022-06-12
Release date:2023-06-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Venom protection by antibody from a snakebite hyperimmune subject
To Be Published
8D9Z
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BU of 8d9z by Molmil
Crystal structure of Cobra alpha-neurotoxin in complex with Centi-3FTX-D09 antibody
Descriptor: ACETATE ION, Centi-3FTX-D09 Fab heavy chain, Centi-3FTX-D09 Fab light chain, ...
Authors:Pletnev, S, Verardi, R, Tully, E.S, Glanville, J, Kwong, P.D.
Deposit date:2022-06-12
Release date:2023-06-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Venom protection by antibody from a snakebite hyperimmune subject
To Be Published
8DEC
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BU of 8dec by Molmil
Cryo-EM Structure of Western Equine Encephalitis Virus
Descriptor: Capsid protein, Spike glycoprotein E1, Spike glycoprotein E2
Authors:Pletnev, S, Verardi, R, Roedeger, M, Kwong, P.
Deposit date:2022-06-20
Release date:2023-07-05
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8DA1
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BU of 8da1 by Molmil
Crystal structure of Krait alpha-neurotoxin in complex with Centi-3FTX-D09 antibody
Descriptor: Alpha-bungarotoxin, Centi-3FTX-D09 Fab heavy chain, Centi-3FTX-D09 Fab light chain
Authors:Pletnev, S, Verardi, R, Tully, E.S, Glanville, J, Kwong, P.D.
Deposit date:2022-06-12
Release date:2023-06-14
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Venom protection by antibody from a snakebite hyperimmune subject
To Be Published
8DA0
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BU of 8da0 by Molmil
Crystal structure of Mamba alpha-neurotoxin in complex with Centi-3FTX-D09 antibody
Descriptor: ACETATE ION, Alpha-elapitoxin-Dpp2d, Centi-3FTX-D09 Fab heavy chain, ...
Authors:Pletnev, S, Verardi, R, Tully, E.S, Glanville, J, Kwong, P.D.
Deposit date:2022-06-12
Release date:2023-06-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Venom protection by antibody from a snakebite hyperimmune subject
To Be Published
8DED
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BU of 8ded by Molmil
Cryo-EM Structure of Western Equine Encephalitis Virus VLP in complex with SKW19 fab
Descriptor: SKW19 Fab heavy chain, SKW19 Fab light chain, Spike glycoprotein E1, ...
Authors:Pletnev, S, Tsybovsky, Y, Verardi, R, Roedeger, M, Kwong, P.
Deposit date:2022-06-20
Release date:2023-07-05
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8DEE
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BU of 8dee by Molmil
Asymmetric Unit of Western Equine Encephalitis Virus
Descriptor: Capsid protein, Spike glycoprotein E1, Spike glycoprotein E2
Authors:Pletnev, S, Verardi, R, Roedeger, M, Kwong, P.
Deposit date:2022-06-20
Release date:2023-07-05
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8DEF
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BU of 8def by Molmil
Cryo-EM Structure of Western Equine Encephalitis Virus VLP in complex with SKW24 fab
Descriptor: SKW24 Fab heavy chain, SKW24 Fab light chain, Spike glycoprotein E1, ...
Authors:Pletnev, S, Tsybovsky, Y, Verardi, R, Roedeger, M, Kwong, P.D.
Deposit date:2022-06-20
Release date:2023-07-05
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8DUL
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BU of 8dul by Molmil
Cryo-EM Structure of Antibody SKT05 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Fab SKT05 heavy chain, ...
Authors:Cerutti, G, Verardi, R, Roederer, M, Shapiro, L.
Deposit date:2022-07-27
Release date:2023-07-05
Method:ELECTRON MICROSCOPY (4.17 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8DUN
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BU of 8dun by Molmil
Cryo-EM Structure of Antibody SKW11 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody SKW11 heavy chain, ...
Authors:Cerutti, G, Verardi, R, Roederer, M, Shapiro, L.
Deposit date:2022-07-27
Release date:2023-07-05
Method:ELECTRON MICROSCOPY (5.84 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8EEU
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BU of 8eeu by Molmil
Venezuelan equine encephalitis virus-like particle in complex with Fab SKT05
Descriptor: Coat protein, Fab SKT05 heavy chain, Fab SKT05 light chain
Authors:Tsybovsky, Y, Pletnev, S, Verardi, R, Roederer, M, Kwong, P.D.
Deposit date:2022-09-07
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8EEV
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BU of 8eev by Molmil
Venezuelan equine encephalitis virus-like particle in complex with Fab SKT-20
Descriptor: Coat protein, Fab SKT20 heavy chain, Fab SKT20 light chain
Authors:Tsybovsky, Y, Pletnev, S, Verardi, R, Roederer, M, Kwong, P.D.
Deposit date:2022-09-07
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8DWO
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BU of 8dwo by Molmil
Cryo-EM Structure of Eastern Equine Encephalitis Virus in complex with SKE26 Fab
Descriptor: Envelope glycoprotein E1, Envelope glycoprotein E2, SKE26 Fab Heavy Chain, ...
Authors:Pletnev, S, Verardi, R, Roedeger, M, Kwong, P.
Deposit date:2022-08-01
Release date:2023-07-19
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
7KJP
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BU of 7kjp by Molmil
Disulfide Stabilized Norovirus GI.1 VLP Shell Region
Descriptor: Capsid protein VP1
Authors:Gorman, J, Kwong, P.D.
Deposit date:2020-10-26
Release date:2020-12-02
Last modified:2020-12-30
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:Disulfide stabilization of human norovirus GI.1 virus-like particles focuses immune response toward blockade epitopes.
NPJ Vaccines, 5, 2020
6W03
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BU of 6w03 by Molmil
Crystal Structure of HIV-1 BG505 DS-SOSIP.3mut Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.3 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 scFv heavy chain, ...
Authors:Lai, Y.-T, Kwong, P.D.
Deposit date:2020-02-28
Release date:2020-04-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Development of a 3Mut-Apex-Stabilized Envelope Trimer That Expands HIV-1 Neutralization Breadth When Used To Boost Fusion Peptide-Directed Vaccine-Elicited Responses.
J.Virol., 94, 2020
6VTT
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BU of 6vtt by Molmil
Cryo-EM Structure of CAP256-VRC26.25 Fab bound to HIV-1 Env trimer CAP256.wk34.c80 SOSIP.RnS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2020-02-13
Release date:2020-04-08
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of Super-Potent Antibody CAP256-VRC26.25 in Complex with HIV-1 Envelope Reveals a Combined Mode of Trimer-Apex Recognition.
Cell Rep, 31, 2020

 

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