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7ZIR
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BU of 7zir by Molmil
Cryo-EM structure of hnRNPDL amyloid fibrils
分子名称: Heterogeneous nuclear ribonucleoprotein D-like
著者Garcia-Pardo, J, Chaves-Sanjuan, A, Bartolome-Nafria, A, Gil-Garcia, M, Visentin, C, Bolognesi, M, Ricagno, S, Ventura, S.
登録日2022-04-08
公開日2022-12-28
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Cryo-EM structure of hnRNPDL-2 fibrils, a functional amyloid associated with limb-girdle muscular dystrophy D3.
Nat Commun, 14, 2023
8BQ3
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BU of 8bq3 by Molmil
Crystal structure of human R13 mutant of the c-Src SH3 domain in complex with VSL12-peptide
分子名称: PRO-LEU-PRO, Proto-oncogene tyrosine-protein kinase Src
著者Varejao, N, Navarro, S, Ventura, S, Reverter, D.
登録日2022-11-18
公開日2023-11-29
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Crystal structure of human R13 mutant of the c-Src SH3 domain in complex with VSL12-peptide
To Be Published
6RO9
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BU of 6ro9 by Molmil
Human spectrin SH3 domain D48G, E7V, K60V
分子名称: Spectrin alpha, non-erythrocytic 1
著者Reverter, D, Navarro, S, Ventura, S.
登録日2019-05-10
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.814 Å)
主引用文献Human spectrin SH3 domain D48G, E7V, K60V
To Be Published
1H20
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BU of 1h20 by Molmil
Solution structure of the potato carboxypeptidase inhibitor
分子名称: METALLOCARBOXYPEPTIDASE INHIBITOR
著者Gonzalez, C, Neira, J.L, Ventura, S, Bronsoms, S, Aviles, F.X, Rico, M.
登録日2002-07-29
公開日2003-05-09
最終更新日2011-12-28
実験手法SOLUTION NMR
主引用文献Structure and Dynamics of the Potato Carboxypeptidase Inhibitor by 1H and 15N NMR.
Proteins, 50, 2003
2V77
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BU of 2v77 by Molmil
Crystal Structure of Human Carboxypeptidase A1
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CARBOXYPEPTIDASE A1, OCTANE-1,3,5,7-TETRACARBOXYLIC ACID, ...
著者Pallares, I, Fernandez, D, Comellas-Bigler, M, Fernandez-Recio, J, Ventura, S, Aviles, F.X, Vendrell, J.
登録日2007-07-27
公開日2008-07-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献Direct interaction between a human digestive protease and the mucoadhesive poly(acrylic acid).
Acta Crystallogr. D Biol. Crystallogr., D64, 2008
6TXW
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BU of 6txw by Molmil
V30G Transthyretin structure in complex with Tolcalpone
分子名称: Tolcapone, Transthyretin
著者Varejao, N, Reverter, D, Pinheiro, F, Pallares, I, Ventura, S.
登録日2020-01-14
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.153 Å)
主引用文献Tolcapone, a potent aggregation inhibitor for the treatment of familial leptomeningeal amyloidosis.
Febs J., 288, 2021
6TXV
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BU of 6txv by Molmil
A25T Transthyretin structure in complex with Tolcalpone
分子名称: Tolcapone, Transthyretin
著者Varejao, N, Reverter, D, Pinheiro, F, Pallares, I, Ventura, S.
登録日2020-01-14
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Tolcapone, a potent aggregation inhibitor for the treatment of familial leptomeningeal amyloidosis.
Febs J., 288, 2021
6XTK
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BU of 6xtk by Molmil
Y114C Transthyretin structure in complex with Tolcalpone
分子名称: Tolcapone, Transthyretin
著者Varejao, N, Reverter, D, Pinheiro, F, Pallares, I, Ventura, S.
登録日2020-01-16
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Tolcapone, a potent aggregation inhibitor for the treatment of familial leptomeningeal amyloidosis.
Febs J., 288, 2021
5A6I
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BU of 5a6i by Molmil
V122I Transthyretin structure in complex with Tolcalpone
分子名称: TRANSTHYRETIN, Tolcapone
著者Reverter, D, Gallego, P, Santana, R, Ventura, S.
登録日2015-06-26
公開日2016-02-24
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Repositioning Tolcapone as a Potent Inhibitor of Transthyretin Amyloidogenesis and its Associated Cellular Toxicity
Nat.Commun., 7, 2016
5AEK
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BU of 5aek by Molmil
Crystal structure of the human SENP2 C548S in complex with the human SUMO1 K48M F66W
分子名称: SENTRIN-SPECIFIC PROTEASE 2, SMALL UBIQUITIN-RELATED MODIFIER 1
著者Gallego, P, Grana-Montes, R, Espargaro, A, Castillo, V, Torrent, J, Lange, R, Papaleo, E, Lindorff-Larsend, K, Ventura, S, Reverter, D.
登録日2014-12-23
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Stepping Back and Forward on Sumo Folding Evolution
To be Published
2ABZ
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BU of 2abz by Molmil
Crystal structure of C19A/C43A mutant of leech carboxypeptidase inhibitor in complex with bovine carboxypeptidase A
分子名称: Carboxypeptidase A1, Metallocarboxypeptidase inhibitor, ZINC ION
著者Arolas, J.L, Popowicz, G.M, Bronsoms, S, Aviles, F.X, Huber, R, Holak, T.A, Ventura, S.
登録日2005-07-18
公開日2006-01-31
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Study of a major intermediate in the oxidative folding of leech carboxypeptidase inhibitor: contribution of the fourth disulfide bond
J.Mol.Biol., 352, 2005
1ZFL
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BU of 1zfl by Molmil
Solution structure of III-A, the major intermediate in the oxidative folding of leech carboxypeptidase inhibitor
分子名称: Metallocarboxypeptidase inhibitor
著者Arolas, J.L, D'Silva, L, Popowicz, G.M, Aviles, F.X, Holak, T.A, Ventura, S.
登録日2005-04-20
公開日2005-09-13
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献NMR structural characterization and computational predictions of the major intermediate in oxidative folding of leech carboxypeptidase inhibitor
STRUCTURE, 13, 2005
7QC5
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BU of 7qc5 by Molmil
Crystal structure of human wild type transthyretin in complex with (3,4-dihydroxy-5-nitrophenyl)-(3-fluoro-5-hydroxyphenyl)methanone compound
分子名称: (3-fluoranyl-5-oxidanyl-phenyl)-[3-nitro-4,5-bis(oxidanyl)phenyl]methanone, Transthyretin
著者Varejao, N, Pinheiro, F, Pallares, I, Ventura, S, Reverter, D.
登録日2021-11-22
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Development of a Highly Potent Transthyretin Amyloidogenesis Inhibitor: Design, Synthesis, and Evaluation.
J.Med.Chem., 65, 2022
2BOA
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BU of 2boa by Molmil
Human procarboxypeptidase A4.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBOXYPEPTIDASE A4, ...
著者Garcia-Castellanos, R, Bonet-Figueredo, R, Pallares, I, Ventura, S, Aviles, F.X, Vendrell, J, Gomis-Ruth, F.X.
登録日2005-04-08
公開日2005-12-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Detailed Molecular Comparison between the Inhibition Mode of A/B-Type Carboxypeptidases in the Zymogen State and by the Endogenous Inhibitor Latexin.
Cell.Mol.Life Sci., 62, 2005
4D7B
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BU of 4d7b by Molmil
Structure of human transthyretin in complex with Tolcapone
分子名称: TRANSTHYRETIN, Tolcapone
著者Gallego, P, Sant'anna, R.O, Ventura, S, Reverter, D.
登録日2014-11-21
公開日2016-01-20
最終更新日2016-03-02
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Repositioning Tolcapone as a Potent Inhibitor of Transthyretin Amyloidogenesis and its Associated Cellular Toxicity
Nat.Commun., 7, 2016
5FWB
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BU of 5fwb by Molmil
Human Spectrin SH3 domain D48G, E7F, K60F
分子名称: SPECTRIN ALPHA CHAIN, NON-ERYTHROCYTIC 1
著者Gallego, P, Navarro, S, Ventura, S, Reverter, D.
登録日2016-02-12
公開日2016-12-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Human Spectrin SH3 Domain D48G, E7F, K60F
To be Published
5FW9
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BU of 5fw9 by Molmil
Human Spectrin SH3 domain D48G, E7Y, K60Y
分子名称: SPECTRIN ALPHA CHAIN, NON-ERYTHROCYTIC 1
著者Gallego, P, Navarro, S, Ventura, S, Reverter, D.
登録日2016-02-12
公開日2016-12-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Human Spectrin SH3 Domain D48G, E7Y, K60Y
To be Published
5FWC
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BU of 5fwc by Molmil
Human Spectrin SH3 domain D48G, E7A, K60A
分子名称: 1,2-ETHANEDIOL, AMMONIUM ION, SPECTRIN ALPHA CHAIN, ...
著者Gallego, P, Navarro, S, Ventura, S, Reverter, D.
登録日2016-02-12
公開日2016-12-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Human Spectrin SH3 Domain D48G, E7A, K60A
To be Published
5FW6
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BU of 5fw6 by Molmil
Structure of human transthyretin mutant A108V
分子名称: TRANSTHYRETIN
著者Gallego, P, Varejao, N, Santanna, R, Saraiva, M.J, Ventura, S, Reverter, D.
登録日2016-02-12
公開日2017-03-08
最終更新日2017-06-14
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Cavity filling mutations at the thyroxine-binding site dramatically increase transthyretin stability and prevent its aggregation.
Sci Rep, 7, 2017
5FO2
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BU of 5fo2 by Molmil
Structure of human transthyretin mutant A108I
分子名称: TRANSTHYRETIN
著者Varejao, N, Santanna, R, Saraiva, M.J, Gallego, P, Ventura, S, Reverter, D.
登録日2015-11-17
公開日2016-11-30
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (1.449 Å)
主引用文献Cavity filling mutations at the thyroxine-binding site dramatically increase transthyretin stability and prevent its aggregation.
Sci Rep, 7, 2017
6FWW
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BU of 6fww by Molmil
GFP/KKK. A redesigned GFP with improved solubility
分子名称: Green fluorescent protein
著者Varejao, N, Lascorz, J, Gil-Garcia, M, Diaz-Caballero, M, Navarro, S, Ventura, S, Reverter, D.
登録日2018-03-07
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.131 Å)
主引用文献Combining Structural Aggregation Propensity and Stability Predictions To Redesign Protein Solubility.
Mol. Pharm., 15, 2018
1ZFI
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BU of 1zfi by Molmil
Solution structure of the leech carboxypeptidase inhibitor
分子名称: Metallocarboxypeptidase inhibitor
著者Arolas, J.L, D'Silva, L, Popowicz, G.M, Aviles, F.X, Holak, T.A, Ventura, S.
登録日2005-04-20
公開日2005-09-13
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献NMR structural characterization and computational predictions of the major intermediate in oxidative folding of leech carboxypeptidase inhibitor
STRUCTURE, 13, 2005
2BO9
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BU of 2bo9 by Molmil
Human carboxypeptidase A4 in complex with human latexin.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETONE, ...
著者Pallares, I, Bonet, R, Garcia-Castellanos, R, Ventura, S, Aviles, F.X, Vendrell, J, Gomis-Rueth, F.X.
登録日2005-04-08
公開日2005-04-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of Human Carboxypeptidase A4 with its Endogenous Protein Inhibitor, Latexin.
Proc.Natl.Acad.Sci.USA, 102, 2005
5AQ0
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BU of 5aq0 by Molmil
The structure of the Transthyretin-like domain of the first catalytic domain of the HUMAN Carboxypeptidase D
分子名称: CARBOXYPEPTIDASE D, GLYCEROL
著者Gallego, P, Garcia-Pardo, J, Lorenzo, J, Aviles, F.X, Ventura, S, Reverter, D.
登録日2015-09-18
公開日2016-09-28
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献The Structure of the Ttldomain of the Human Carboxypeptidase D
To be Published
6FXU
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BU of 6fxu by Molmil
Crystal structure of human transthyretin mutant T119M at pH 5.5
分子名称: Transthyretin
著者Varejao, N, Esperante, S, Ventura, S, Reverter, D.
登録日2018-03-09
公開日2019-03-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.359 Å)
主引用文献Disease-associated mutations impacting BC-loop flexibility trigger long-range transthyretin tetramer destabilization and aggregation.
J.Biol.Chem., 297, 2021

 

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