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2BAY
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BU of 2bay by Molmil
Crystal structure of the Prp19 U-box dimer
分子名称: Pre-mRNA splicing factor PRP19
著者Vander Kooi, C.W, Ohi, M.D, Rosenberg, J.A, Oldham, M.L, Newcomer, M.E, Gould, K.L, Chazin, W.J.
登録日2005-10-15
公開日2006-01-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Prp19 U-box Crystal Structure Suggests a Common Dimeric Architecture for a Class of Oligomeric E3 Ubiquitin Ligases.
Biochemistry, 45, 2006
2ORX
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BU of 2orx by Molmil
Structural Basis for Ligand Binding and Heparin Mediated Activation of Neuropilin
分子名称: Neuropilin-1
著者Vander Kooi, C.W, Jusino, M.A, Perman, B, Neau, D.B, Bellamy, H.D, Leahy, D.J.
登録日2007-02-05
公開日2007-04-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for ligand and heparin binding to neuropilin B domains
Proc.Natl.Acad.Sci.Usa, 104, 2007
2ORZ
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BU of 2orz by Molmil
Structural Basis for Ligand Binding and Heparin Mediated Activation of Neuropilin
分子名称: Neuropilin-1, Tuftsin
著者Vander Kooi, C.W, Jusino, M.A, Perman, B, Neau, D.B, Bellamy, H.D, Leahy, D.J.
登録日2007-02-05
公開日2007-04-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for ligand and heparin binding to neuropilin B domains.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3LRV
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BU of 3lrv by Molmil
The Prp19 WD40 Domain Contains a Conserved Protein Interaction Region Essential for its Function.
分子名称: Pre-mRNA-splicing factor 19, SULFATE ION
著者Vander Kooi, C.W, Chazin, W.J.
登録日2010-02-11
公開日2010-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Prp19 WD40 domain contains a conserved protein interaction region essential for its function.
Structure, 18, 2010
3NME
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BU of 3nme by Molmil
Structure of a plant phosphatase
分子名称: PHOSPHATE ION, SEX4 glucan phosphatase
著者Vander Kooi, C.W.
登録日2010-06-22
公開日2010-08-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the glucan phosphatase activity of Starch Excess4.
Proc.Natl.Acad.Sci.USA, 107, 2010
4DEQ
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BU of 4deq by Molmil
Structure of the Neuropilin-1/VEGF-A complex
分子名称: Neuropilin-1, Vascular endothelial growth factor A, PHOSPHATE ION
著者Vander Kooi, C.W.
登録日2012-01-21
公開日2012-02-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.649 Å)
主引用文献Structural Basis for Selective Vascular Endothelial Growth Factor-A (VEGF-A) Binding to Neuropilin-1.
J.Biol.Chem., 287, 2012
5C1F
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BU of 5c1f by Molmil
Structure of the Imp2 F-BAR domain
分子名称: FORMIC ACID, Septation protein imp2
著者Vander Kooi, C.W.
登録日2015-06-13
公開日2016-01-27
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.3551 Å)
主引用文献The Tubulation Activity of a Fission Yeast F-BAR Protein Is Dispensable for Its Function in Cytokinesis.
Cell Rep, 14, 2016
4RKK
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BU of 4rkk by Molmil
Structure of a product bound phosphatase
分子名称: Laforin, PHOSPHATE ION, alpha-D-glucopyranose, ...
著者Vander Kooi, C.W.
登録日2014-10-13
公開日2015-01-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural mechanism of laforin function in glycogen dephosphorylation and lafora disease.
Mol.Cell, 57, 2015
1N87
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BU of 1n87 by Molmil
Solution structure of the U-box of Prp19
分子名称: Pre-mRNA splicing factor PRP19
著者Chazin, W.J, Ohi, M.D, Vander Kooi, C.W.
登録日2002-11-19
公開日2003-04-15
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structural insights into the U-box, a domain associated with multi-ubiquitination
Nat.Struct.Biol., 10, 2003
3BXL
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BU of 3bxl by Molmil
Crystal structure of the R-type calcium channeL (CaV2.3) IQ domain and CA2+calmodulin complex
分子名称: CALCIUM ION, Calmodulin, SULFATE ION, ...
著者Mori, M.X, Vander Kooi, C.W, Leahy, D.J, Yue, D.T.
登録日2008-01-14
公開日2008-03-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the CaV2 IQ domain in complex with Ca2+/calmodulin
To be Published
3BXK
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BU of 3bxk by Molmil
Crystal structure of the P/Q-type calcium channel (CaV2.1) IQ domain and CA2+calmodulin complex
分子名称: CALCIUM ION, Calmodulin, SULFATE ION, ...
著者Mori, M.X, Vander Kooi, C.W, Leahy, D.J, Yue, D.T.
登録日2008-01-14
公開日2008-03-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of the P/Q-type calcium channel (CaV2.1) IQ domain and CA2+calmodulin complex
To be Published
4QDQ
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BU of 4qdq by Molmil
Physical basis for Nrp2 ligand binding
分子名称: GLYCEROL, Neuropilin-2, SULFATE ION
著者Parker, M.W, Vander Kooi, C.W.
登録日2014-05-14
公開日2015-04-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form.
Structure, 23, 2015
4PYH
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BU of 4pyh by Molmil
Phospho-glucan bound structure of starch phosphatase Starch EXcess4 reveals the mechanism for C6-specificty
分子名称: GLYCEROL, MAGNESIUM ION, PHOSPHATE ION, ...
著者Meekins, D.A, Vander Kooi, C.W.
登録日2014-03-27
公開日2014-04-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Phosphoglucan-bound structure of starch phosphatase Starch Excess4 reveals the mechanism for C6 specificity.
Proc.Natl.Acad.Sci.USA, 111, 2014
4Q5U
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BU of 4q5u by Molmil
Structure of calmodulin bound to its recognition site from calcineurin
分子名称: CALCIUM ION, Calmodulin, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform
著者Guo, H, Dunlap, T.B, Creamer, T.P, Vander Kooi, C.W.
登録日2014-04-17
公開日2014-09-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Stoichiometry of the calcineurin regulatory domain-calmodulin complex.
Biochemistry, 53, 2014
4QDR
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BU of 4qdr by Molmil
Physical basis for Nrp2 ligand binding
分子名称: Neuropilin-2
著者Parker, M.W, Vander Kooi, C.W.
登録日2014-05-14
公開日2015-04-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form.
Structure, 23, 2015
4QDS
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BU of 4qds by Molmil
Physical basis for Nrp2 ligand binding
分子名称: ACETATE ION, GLYCEROL, Neuropilin-2
著者Parker, M.W, Vander Kooi, C.W.
登録日2014-05-14
公開日2015-04-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form.
Structure, 23, 2015
4KYR
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BU of 4kyr by Molmil
Structure of a product bound plant phosphatase
分子名称: PHOSPHATE ION, Phosphoglucan phosphatase LSF2, chloroplastic, ...
著者Meekins, D.A, Guo, H.-F, Husodo, S, Paasch, B.C, Bridges, T.M, Santelia, D, Kotting, O, Vander Kooi, C.W, Gentry, M.S.
登録日2013-05-29
公開日2013-07-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the Arabidopsis Glucan Phosphatase LIKE SEX FOUR2 Reveals a Unique Mechanism for Starch Dephosphorylation.
Plant Cell, 25, 2013
4KYQ
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BU of 4kyq by Molmil
Structure of a product bound plant phosphatase
分子名称: CITRATE ANION, Phosphoglucan phosphatase LSF2, chloroplastic
著者Meekins, D.A, Guo, H.-F, Husodo, S, Paasch, B.C, Bridges, T.M, Santelia, D, Kotting, O, Vander Kooi, C.W, Gentry, M.S.
登録日2013-05-29
公開日2013-07-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structure of the Arabidopsis Glucan Phosphatase LIKE SEX FOUR2 Reveals a Unique Mechanism for Starch Dephosphorylation.
Plant Cell, 25, 2013
1DG4
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BU of 1dg4 by Molmil
NMR STRUCTURE OF THE SUBSTRATE BINDING DOMAIN OF DNAK IN THE APO FORM
分子名称: DNAK
著者Pellecchia, M, Montgomery, D.L, Stevens, S.Y, Van der Kooi, C.W, Feng, H, Gierasch, L.M, Zuiderweg, E.R.P.
登録日1999-11-23
公開日1999-12-08
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Structural insights into substrate binding by the molecular chaperone DnaK.
Nat.Struct.Biol., 7, 2000
6UJO
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BU of 6ujo by Molmil
HHAT L75F Neoantigen Peptide KQWLVWLFL Presented by HLA-A206
分子名称: Beta-2-microglobulin, MHC class I antigen, Protein-cysteine N-palmitoyltransferase HHAT
著者Devlin, J.R, Baker, B.M, Vander Kooi, C.
登録日2019-10-03
公開日2020-08-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural dissimilarity from self drives neoepitope escape from immune tolerance.
Nat.Chem.Biol., 16, 2020
5JZI
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BU of 5jzi by Molmil
Crystal structure of 1406 TCR bound to HLA-A2 with HCV 1406-1415 antigen peptide
分子名称: Beta-2-microglobulin, HCV1406 TCR alpha chain, HCV1406 TCR beta chain, ...
著者Wang, Y, Piepenbrink, K.H, Baker, B.M.
登録日2016-05-16
公開日2017-05-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献How an alloreactive T-cell receptor achieves peptide and MHC specificity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6DKP
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BU of 6dkp by Molmil
The complex among DMF5(alpha-D26Y, alpha-Y50A,beta-L98W) TCR, human Class I MHC HLA-A2 and MART-1(26-35)(A27L) peptide
分子名称: Beta-2-microglobulin, DMF5 T-cell Receptor Alpha Chain fusion, DMF5 T-cell Receptor Beta Chain fusion, ...
著者Hellman, L.M, Singh, N.K.
登録日2018-05-30
公開日2019-04-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.966 Å)
主引用文献Improving T Cell Receptor On-Target Specificity via Structure-Guided Design.
Mol. Ther., 27, 2019
6D78
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BU of 6d78 by Molmil
The complex between high-affinity TCR DMF5(alpha-D26Y,beta-L98W) and human Class I MHC HLA-A2 with the bound MART-1(27-35)peptide
分子名称: Beta-2-microglobulin, DMF5 alpha chain,DMF5 alpha chain, DMF5 beta chain,DMF5 beta chain, ...
著者Hellman, L.M, Singh, N.K.
登録日2018-04-24
公開日2019-04-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.347 Å)
主引用文献Improving T Cell Receptor On-Target Specificity via Structure-Guided Design.
Mol. Ther., 27, 2019
7UWU
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BU of 7uwu by Molmil
Starch adherence system protein 6 (Sas6)
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Starch Adherence System protein 6 (Sas6), ...
著者Photenhauer, A.L, Koropatkin, N.M.
登録日2022-05-04
公開日2023-06-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The Ruminococcus bromii amylosome protein Sas6 binds single and double helical alpha-glucan structures in starch.
Nat.Struct.Mol.Biol., 31, 2024
7UWW
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BU of 7uww by Molmil
Sas6 with alpha-cyclodextrin
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), ...
著者Photenhauer, A.L, Koropatkin, N.M.
登録日2022-05-04
公開日2023-06-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献The Ruminococcus bromii amylosome protein Sas6 binds single and double helical alpha-glucan structures in starch.
Nat.Struct.Mol.Biol., 31, 2024

 

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