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2G1Z
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BU of 2g1z by Molmil
X-ray structure of the oligonucleotide sequence d(AAATTT)
Descriptor: 5'-D(*AP*AP*AP*TP*TP*T)-3'
Authors:Valls, N, Santaolalla, A, Campos, J.L, Subirana, J.A.
Deposit date:2006-02-15
Release date:2006-03-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Packing features of the all-AT oligonucleotide d(AAATTT).
J.Biomol.Struct.Dyn., 24, 2007
1S23
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BU of 1s23 by Molmil
Crystal Structure Analysis of the B-DNA Decamer CGCAATTGCG
Descriptor: 5'-D(*CP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3', COBALT (II) ION
Authors:Valls, N, Wright, G, Steiner, R.A, Murshudov, G.N, Subirana, J.A.
Deposit date:2004-01-08
Release date:2004-04-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DNA variability in five crystal structures of d(CGCAATTGCG).
Acta Crystallogr.,Sect.D, 60, 2004
1S9B
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BU of 1s9b by Molmil
Crystal Structure Analysis of the B-DNA GAATTCG
Descriptor: 5'-D(*GP*AP*AP*TP*TP*CP*G)-3', NICKEL (II) ION
Authors:Valls, N, Uson, I, Gouyette, C, Subirana, J.A.
Deposit date:2004-02-04
Release date:2004-09-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:A cubic arrangement of DNA double helices based on nickel-guanine interactions
J.Am.Chem.Soc., 126, 2004
2A2T
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BU of 2a2t by Molmil
crystal structure of d(AAATATTT)
Descriptor: 5'-D(*AP*AP*AP*TP*AP*TP*TP*T)-3', CACODYLATE ION, MANGANESE (II) ION
Authors:Valls, N, Richter, M, Subirana, J.A.
Deposit date:2005-06-23
Release date:2005-11-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of a DNA duplex with all-AT base pairs.
Acta Crystallogr.,Sect.D, 61, 2005
1XCS
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BU of 1xcs by Molmil
structure of oligonucleotide/drug complex
Descriptor: 5'-D(*CP*GP*TP*AP*CP*G)-3', 9-[(5-(ACETYLAMINO)-6-{[(1S,4R)-8-AMINO-4-[((2R)-6-AMINO-2-{2-[(1S)-5-AMINO-1-FORMYLPENTYL]HYDRAZINO}HEXANOYL)AMINO]-1-(4-AMINOBUTYL)-2,3-DIOXOOCTYL]AMINO}-6-OXOHEXYL)AMINO]-6-CHLORO-2-METHOXYACRIDINIUM, BARIUM ION, ...
Authors:Valls, N, Steiner, R.A, Wright, G, Murshudov, G.N, Subirana, J.A.
Deposit date:2004-09-03
Release date:2005-07-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Variable role of ions in two drug intercalation complexes of DNA
J.Biol.Inorg.Chem., 10, 2005
1XCU
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BU of 1xcu by Molmil
oligonucleotid/drug complex
Descriptor: 1,5-BIS[3-(DIETHYLAMINO)PROPIONAMIDO]ANTHRACENE-9,10-DIONE, 5'-D(*CP*GP*TP*AP*CP*G)-3', BARIUM ION, ...
Authors:Valls, N, Steiner, R.A, Wright, G, Murshudov, G.N, Subirana, J.A.
Deposit date:2004-09-03
Release date:2005-07-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Variable role of ions in two drug intercalation complexes of DNA
J.Biol.Inorg.Chem., 10, 2005
2V2L
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BU of 2v2l by Molmil
Mutant (E53,56,57,60Q) recombinant horse spleen apoferritin cocrystallized with haemin in acidic conditions
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, GLYCEROL, ...
Authors:De Val, N, Declercq, J.P.
Deposit date:2007-06-06
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
2V2S
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BU of 2v2s by Molmil
Mutant R59M recombinant horse spleen apoferritin crystallized in acidic conditions
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, GLYCEROL, ...
Authors:De Val, N, Declercq, J.P.
Deposit date:2007-06-06
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
2V2O
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BU of 2v2o by Molmil
Mutant R59M recombinant horse spleen apoferritin cocrystallized with haemin in basic conditions
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, GLYCEROL, ...
Authors:De Val, N, Declercq, J.P.
Deposit date:2007-06-06
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
2V2N
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BU of 2v2n by Molmil
Mutant R59M recombinant horse spleen apoferritin cocrystallized with haemin in acidic conditions
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, GLYCEROL, ...
Authors:De Val, N, Declercq, J.P.
Deposit date:2007-06-06
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
2V2J
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BU of 2v2j by Molmil
Wild type recombinant horse spleen apoferritin cocrystallized with haemin in basic conditions
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, GLYCEROL, ...
Authors:De Val, N, Declercq, J.P.
Deposit date:2007-06-06
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
2V2P
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BU of 2v2p by Molmil
Mutant (E53,56,57,60Q and R59M) recombinant horse spleen apoferritin cocrystallized with haemin in acidic conditions
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, GLYCEROL, ...
Authors:De Val, N, Declercq, J.P.
Deposit date:2007-06-06
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
2V2M
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BU of 2v2m by Molmil
Mutant (E53,56,57,60Q) recombinant horse spleen apoferritin cocrystallized with haemin in basic conditions
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, GLYCEROL, ...
Authors:De Val, N, Declercq, J.P.
Deposit date:2007-06-06
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
2V2I
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BU of 2v2i by Molmil
Wild type recombinant horse spleen apoferritin cocrystallized with haemin in acidic conditions
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, GLYCEROL, ...
Authors:De Val, N, Declercq, J.P.
Deposit date:2007-06-06
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
2V2R
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BU of 2v2r by Molmil
Mutant (E53,56,57,60Q and R59M) recombinant horse spleen apoferritin cocrystallized with haemin in basic conditions
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, GLYCEROL, ...
Authors:De Val, N, Declercq, J.P.
Deposit date:2007-06-06
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
6N7W
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BU of 6n7w by Molmil
Structure of bacteriophage T7 leading-strand DNA polymerase (D5A/E7A)/Trx in complex with a DNA fork and incoming dTTP (from multiple lead complexes)
Descriptor: DNA (25-MER), DNA (77-MER), DNA-directed DNA polymerase, ...
Authors:Gao, Y, Fox, T, Val, N, Yang, W.
Deposit date:2018-11-28
Release date:2019-03-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
6N9V
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BU of 6n9v by Molmil
Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS1)
Descriptor: DNA primase/helicase, DNA-directed DNA polymerase, MAGNESIUM ION, ...
Authors:Gao, Y, Fox, T, Val, N, Yang, W.
Deposit date:2018-12-04
Release date:2019-03-06
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
6N9U
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BU of 6n9u by Molmil
Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) interacting with primase domains of two gp4 subunits bound to an RNA/DNA hybrid and dTTP (from LagS1)
Descriptor: DNA (44-MER), DNA primase/helicase, DNA-directed DNA polymerase, ...
Authors:Gao, Y, Fox, T, Val, N, Yang, W.
Deposit date:2018-12-04
Release date:2019-03-06
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
6N7V
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BU of 6n7v by Molmil
Structure of bacteriophage T7 gp4 (helicase-primase, E343Q mutant) in complex with ssDNA, dTTP, AC dinucleotide, and CTP (from multiple lead complexes)
Descriptor: DNA (93-MER), DNA primase/helicase, MAGNESIUM ION, ...
Authors:Gao, Y, Fox, T, Val, N, Yang, W.
Deposit date:2018-11-28
Release date:2019-03-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
6N9X
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BU of 6n9x by Molmil
Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS3)
Descriptor: DNA primase/helicase, DNA-directed DNA polymerase, MAGNESIUM ION, ...
Authors:Gao, Y, Fox, T, Val, N, Yang, W.
Deposit date:2018-12-04
Release date:2019-03-06
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
5KEL
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BU of 5kel by Molmil
EBOV GP in complex with variable Fab domains of IgGs c2G4 and c13C6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ebola surface glycoprotein, ...
Authors:Pallesen, J, Murin, C.D, de Val, N, Cottrell, C.A, Hastie, K.M, Turner, H.L, Fusco, M.L, Flyak, A.I, Zeitlin, L, Crowe Jr, J.E, Andersen, K.G, Saphire, E.O, Ward, A.B.
Deposit date:2016-06-09
Release date:2016-09-07
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structures of Ebola virus GP and sGP in complex with therapeutic antibodies.
Nat Microbiol, 1, 2016
5KEN
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BU of 5ken by Molmil
EBOV GP in complex with variable Fab domains of IgGs c4G7 and c13C6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ebola surface glycoprotein, ...
Authors:Pallesen, J, Murin, C.D, de Val, N, Cottrell, C.A, Hastie, K.M, Turner, H.L, Fusco, M.L, Flyak, A.I, Zeitlin, L, Crowe Jr, J.E, Andersen, K.G, Saphire, E.O, Ward, A.B.
Deposit date:2016-06-09
Release date:2016-09-07
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structures of Ebola virus GP and sGP in complex with therapeutic antibodies.
Nat Microbiol, 1, 2016
5KEM
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BU of 5kem by Molmil
EBOV sGP in complex with variable Fab domains of IgGs c13C6 and BDBV91
Descriptor: BDBV91 variable Fab domain heavy chain, BDBV91 variable Fab domain light chain, Ebola secreted glycoprotein, ...
Authors:Pallesen, J, Murin, C.D, de Val, N, Cottrell, C.A, Hastie, K.M, Turner, H.L, Fusco, M.L, Flyak, A.I, Zeitlin, L, Crowe Jr, J.E, Andersen, K.G, Saphire, E.O, Ward, A.B.
Deposit date:2016-06-09
Release date:2016-09-07
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Structures of Ebola virus GP and sGP in complex with therapeutic antibodies.
Nat Microbiol, 1, 2016
2W0O
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BU of 2w0o by Molmil
Horse spleen apoferritin
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, SULFATE ION
Authors:De Val, N, Declercq, J.P.
Deposit date:2008-08-20
Release date:2008-08-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
6OHY
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BU of 6ohy by Molmil
Chimpanzee SIV Env trimeric ectodomain.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pallesen, J, Andrabi, R, de Val, N, Burton, D.R, Ward, A.B.
Deposit date:2019-04-08
Release date:2019-06-05
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:The Chimpanzee SIV Envelope Trimer: Structure and Deployment as an HIV Vaccine Template.
Cell Rep, 27, 2019

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PDB entries from 2024-11-06

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