Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1HST
DownloadVisualize
BU of 1hst by Molmil
CRYSTAL STRUCTURE OF GLOBULAR DOMAIN OF HISTONE H5 AND ITS IMPLICATIONS FOR NUCLEOSOME BINDING
分子名称: HISTONE H5
著者Ramakrishnan, V, Finch, J.T, Graziano, V, Lee, P.L, Sweet, R.M.
登録日1993-03-30
公開日1993-10-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of globular domain of histone H5 and its implications for nucleosome binding.
Nature, 362, 1993
1PKP
DownloadVisualize
BU of 1pkp by Molmil
THE STRUCTURE OF RIBOSOMAL PROTEIN S5 REVEALS SITES OF INTERACTION WITH 16S RRNA
分子名称: RIBOSOMAL PROTEIN S5
著者Ramakrishnan, V, White, S.W.
登録日1993-08-30
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structure of ribosomal protein S5 reveals sites of interaction with 16S rRNA.
Nature, 358, 1992
1BOB
DownloadVisualize
BU of 1bob by Molmil
HISTONE ACETYLTRANSFERASE HAT1 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH ACETYL COENZYME A
分子名称: ACETYL COENZYME *A, CALCIUM ION, HISTONE ACETYLTRANSFERASE
著者Dutnall, R.N, Tafrov, S.T, Sternglanz, R, Ramakrishnan, V.
登録日1998-07-02
公開日1999-04-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the histone acetyltransferase Hat1: a paradigm for the GCN5-related N-acetyltransferase superfamily.
Cell(Cambridge,Mass.), 94, 1998
8OZ0
DownloadVisualize
BU of 8oz0 by Molmil
Structure of a human 48S translation initiation complex with eIF4F and eIF4A
分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Brito Querido, J, Sokabe, M, Diaz-Lopez, I, Gordiyenko, Y, Fraser, C.S, Ramakrishnan, V.
登録日2023-05-06
公開日2024-02-07
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The structure of a human translation initiation complex reveals two independent roles for the helicase eIF4A.
Nat.Struct.Mol.Biol., 31, 2024
6QG1
DownloadVisualize
BU of 6qg1 by Molmil
Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model 2)
分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ...
著者Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V.
登録日2019-01-10
公開日2019-06-26
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural basis for the inhibition of translation through eIF2 alpha phosphorylation.
Nat Commun, 10, 2019
7PD3
DownloadVisualize
BU of 7pd3 by Molmil
Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and MALSU1.L0R8F8.mt-ACP
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Chandrasekaran, V, Desai, N, Burton, N.O, Yang, H, Price, J, Miska, E.A, Ramakrishnan, V.
登録日2021-08-04
公開日2021-11-17
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Visualizing formation of the active site in the mitochondrial ribosome.
Elife, 10, 2021
4V5G
DownloadVisualize
BU of 4v5g by Molmil
The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
分子名称: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Schmeing, T.M, Voorhees, R.M, Ramakrishnan, V.
登録日2009-09-01
公開日2014-07-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献The crystal structure of the ribosome bound to EF-Tu and aminoacyl-tRNA.
Science, 326, 2009
4V5Q
DownloadVisualize
BU of 4v5q by Molmil
The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome
分子名称: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Schmeing, T.M, Voorhees, R.M, Ramakrishnan, V.
登録日2010-12-07
公開日2014-07-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献How Mutations in tRNA Distant from the Anticodon Affect the Fidelity of Decoding.
Nat.Struct.Mol.Biol., 18, 2011
3OTO
DownloadVisualize
BU of 3oto by Molmil
Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8)
分子名称: 16S rRNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Demirci, H, Murphy IV, F, Belardinelli, R, Kelley, A.C, Ramakrishnan, V, Gregory, S.T, Dahlberg, A.E, Jogl, G.
登録日2010-09-13
公開日2010-09-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.69 Å)
主引用文献Modification of 16S ribosomal RNA by the KsgA methyltransferase restructures the 30S subunit to optimize ribosome function.
Rna, 16, 2010
1A32
DownloadVisualize
BU of 1a32 by Molmil
RIBOSOMAL PROTEIN S15 FROM BACILLUS STEAROTHERMOPHILUS
分子名称: RIBOSOMAL PROTEIN S15
著者Clemons Junior, W.M, Davies, C, White, S.W, Ramakrishnan, V.
登録日1998-01-27
公開日1998-05-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Conformational variability of the N-terminal helix in the structure of ribosomal protein S15.
Structure, 6, 1998
4WT8
DownloadVisualize
BU of 4wt8 by Molmil
Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
分子名称: 23S rRNA (2899-MER), 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Amunts, A, Fiedorczuk, K, Ramakrishnan, V.
登録日2014-10-29
公開日2015-01-21
最終更新日2018-07-18
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Bactobolin A Binds to a Site on the 70S Ribosome Distinct from Previously Seen Antibiotics.
J.Mol.Biol., 427, 2015
5OOM
DownloadVisualize
BU of 5oom by Molmil
Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA
分子名称: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ...
著者Brown, A, Rathore, S, Kimanius, D, Aibara, S, Bai, X.C, Rorbach, J, Amunts, A, Ramakrishnan, V.
登録日2017-08-08
公開日2017-09-13
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Structures of the human mitochondrial ribosome in native states of assembly.
Nat. Struct. Mol. Biol., 24, 2017
5OOL
DownloadVisualize
BU of 5ool by Molmil
Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA
分子名称: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ...
著者Brown, A, Rathore, S, Kimanius, D, Aibara, S, Bai, X.C, Rorbach, J, Amunts, A, Ramakrishnan, V.
登録日2017-08-08
公開日2017-09-13
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structures of the human mitochondrial ribosome in native states of assembly.
Nat. Struct. Mol. Biol., 24, 2017
5IQR
DownloadVisualize
BU of 5iqr by Molmil
Structure of RelA bound to the 70S ribosome
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Brown, A, Fernandez, I.S, Gordiyenko, Y, Ramakrishnan, V.
登録日2016-03-11
公開日2016-05-04
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Ribosome-dependent activation of stringent control.
Nature, 534, 2016
5IT9
DownloadVisualize
BU of 5it9 by Molmil
Structure of the yeast Kluyveromyces lactis small ribosomal subunit in complex with the cricket paralysis virus IRES.
分子名称: 18S ribosomal RNA, Cricket paralysis virus IRES RNA, MAGNESIUM ION, ...
著者Murray, J, Savva, C.G, Shin, B.S, Dever, T.E, Ramakrishnan, V, Fernandez, I.S.
登録日2016-03-16
公開日2016-05-18
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural characterization of ribosome recruitment and translocation by type IV IRES.
Elife, 5, 2016
5IT7
DownloadVisualize
BU of 5it7 by Molmil
Structure of the Kluyveromyces lactis 80S ribosome in complex with the cricket paralysis virus IRES and eEF2
分子名称: (2S)-1-amino-N,N,N-trimethyl-1-oxobutan-2-aminium, 18S ribosomal RNA, 25S ribosomal RNA, ...
著者Murray, J, Savva, C.G, Shin, B.S, Dever, T.E, Ramakrishnan, V, Fernandez, I.S.
登録日2016-03-16
公開日2016-05-18
最終更新日2018-11-21
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural characterization of ribosome recruitment and translocation by type IV IRES.
Elife, 5, 2016
1FJG
DownloadVisualize
BU of 1fjg by Molmil
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Carter, A.P, Clemons Jr, W.M, Brodersen, D.E, Wimberly, B.T, Morgan-Warren, R.J, Ramakrishnan, V.
登録日2000-08-08
公開日2000-09-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics
Nature, 407, 2000
1TIF
DownloadVisualize
BU of 1tif by Molmil
TRANSLATION INITIATION FACTOR 3 N-TERMINAL DOMAIN
分子名称: CHLORIDE ION, TRANSLATION INITIATION FACTOR 3, TRIMETHYL LEAD ION
著者Biou, V, Shu, F, Ramakrishnan, V.
登録日1995-08-16
公開日1995-12-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallography shows that translational initiation factor IF3 consists of two compact alpha/beta domains linked by an alpha-helix.
EMBO J., 14, 1995
1TIG
DownloadVisualize
BU of 1tig by Molmil
TRANSLATION INITIATION FACTOR 3 C-TERMINAL DOMAIN
分子名称: TRANSLATION INITIATION FACTOR 3
著者Biou, V, Shu, F, Ramakrishnan, V.
登録日1995-08-16
公開日1995-12-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray crystallography shows that translational initiation factor IF3 consists of two compact alpha/beta domains linked by an alpha-helix.
EMBO J., 14, 1995
4V5K
DownloadVisualize
BU of 4v5k by Molmil
Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Ng, C.L, Lang, K, Meenan, N.A.G, Sharma, A, Kelley, A.C, Kleanthous, C, Ramakrishnan, V.
登録日2010-05-29
公開日2014-07-09
最終更新日2019-07-31
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Basis for 16S Ribosomal RNA Cleavage by the Cytotoxic Domain of Colicin E3.
Nat.Struct.Mol.Biol., 17, 2010
1GHC
DownloadVisualize
BU of 1ghc by Molmil
HOMO-AND HETERONUCLEAR TWO-DIMENSIONAL NMR STUDIES OF THE GLOBULAR DOMAIN OF HISTONE H1: FULL ASSIGNMENT, TERTIARY STRUCTURE, AND COMPARISON WITH THE GLOBULAR DOMAIN OF HISTONE H5
分子名称: GH1
著者Cerf, C, Lippens, G, Ramakrishnan, V, Muyldermans, S, Segers, A, Wyns, L, Wodak, S.J, Hallenga, K.
登録日1994-05-16
公開日1994-08-31
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Homo- and heteronuclear two-dimensional NMR studies of the globular domain of histone H1: full assignment, tertiary structure, and comparison with the globular domain of histone H5.
Biochemistry, 33, 1994
1QD7
DownloadVisualize
BU of 1qd7 by Molmil
PARTIAL MODEL FOR 30S RIBOSOMAL SUBUNIT
分子名称: CENTRAL FRAGMENT OF 16 S RNA, END FRAGMENT OF 16 S RNA, S15 RIBOSOMAL PROTEIN, ...
著者Clemons Jr, W.M, May, J.L.C, Wimberly, B.T, McCutcheon, J.P, Capel, M.S, Ramakrishnan, V.
登録日1999-07-09
公開日1999-08-31
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (5.5 Å)
主引用文献Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
Nature, 400, 1999
1HNW
DownloadVisualize
BU of 1hnw by Molmil
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Brodersen, D.E, Clemons Jr, W.M, Carter, A.P, Morgan-Warren, R, Wimberly, B.T, Ramakrishnan, V.
登録日2000-12-08
公開日2001-02-21
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit.
Cell(Cambridge,Mass.), 103, 2000
1HR0
DownloadVisualize
BU of 1hr0 by Molmil
CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Carter, A.P, Clemons Jr, W.M, Brodersen, D.E, Morgan-Warren, R.J, Wimberly, B.T, Ramakrishnan, V.
登録日2000-12-20
公開日2001-01-24
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of an initiation factor bound to the 30S ribosomal subunit.
Science, 291, 2001
1HNX
DownloadVisualize
BU of 1hnx by Molmil
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH PACTAMYCIN
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Brodersen, D.E, Clemons Jr, W.M, Carter, A.P, Morgan-Warren, R, Wimberly, B.T, Ramakrishnan, V.
登録日2000-12-08
公開日2001-02-21
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit.
Cell(Cambridge,Mass.), 103, 2000

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon