Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1XLY
DownloadVisualize
BU of 1xly by Molmil
X-RAY STRUCTURE OF THE RNA-BINDING PROTEIN SHE2p
Descriptor: SHE2p
Authors:Niessing, D, Huettelmaier, S, Zenklusen, D, Singer, R.H, Burley, S.K.
Deposit date:2004-09-30
Release date:2004-11-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:She2p is a novel RNA binding protein with a basic helical hairpin motif
Cell(Cambridge,Mass.), 119, 2004
9QGF
DownloadVisualize
BU of 9qgf by Molmil
Crystal structure of an NADH-accepting ene reductase variant NostocER1-L1,5 mutant T354K
Descriptor: 1,2-ETHANEDIOL, 1-[(6~{R})-3,3-diethanoyl-6-methyl-cyclohexa-1,4-dien-1-yl]ethanone, All1865 protein, ...
Authors:Bischoff, D, Walla, B, Janowski, R, Maslakova, A, Niessing, D, Weuster-Botz, D.
Deposit date:2025-03-13
Release date:2025-04-02
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.444 Å)
Cite:Rational Introduction of Electrostatic Interactions at Crystal Contacts to Enhance Protein Crystallization of an Ene Reductase.
Biomolecules, 15, 2025
7A2B
DownloadVisualize
BU of 7a2b by Molmil
X-ray structure of Lactobacillus brevis alcohol dehydrogenase mutant Q207D
Descriptor: MAGNESIUM ION, R-specific alcohol dehydrogenase
Authors:Bischoff, D, Hermann, J, Janowski, R, Niessing, D, Grob, P, Hekmat, D, Weuster-Botz, D.
Deposit date:2020-08-17
Release date:2020-10-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:Controlling Protein Crystallization by Free Energy Guided Design of Interactions at Crystal Contacts
Crystals, 11, 2021
3K44
DownloadVisualize
BU of 3k44 by Molmil
Crystal Structure of Drosophila melanogaster Pur-alpha
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Purine-rich binding protein-alpha, ...
Authors:Graebsch, A, Roche, S, Niessing, D.
Deposit date:2009-10-05
Release date:2009-10-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structure of Pur-alpha reveals a Whirly-like fold and an unusual nucleic-acid binding surface
Proc.Natl.Acad.Sci.USA, 106, 2009
5M0J
DownloadVisualize
BU of 5m0j by Molmil
Crystal structure of the cytoplasmic complex with She2p, She3p, and the ASH1 mRNA E3-localization element
Descriptor: ASH1 E3 (28 nt-loop), MAGNESIUM ION, SWI5-dependent HO expression protein 2,SWI5-dependent HO expression protein 3
Authors:Edelmann, F.T, Janowski, R, Niessing, D.
Deposit date:2016-10-05
Release date:2017-01-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular architecture and dynamics of ASH1 mRNA recognition by its mRNA-transport complex.
Nat. Struct. Mol. Biol., 24, 2017
9QGE
DownloadVisualize
BU of 9qge by Molmil
Crystal structure of an NADH-accepting ene reductase variant NostocER1-L1,5 mutant D352K
Descriptor: 1,2-ETHANEDIOL, All1865 protein, CHLORIDE ION, ...
Authors:Bischoff, D, Walla, B, Janowski, R, Maslakova, A, Niessing, D, Weuster-Botz, D.
Deposit date:2025-03-13
Release date:2025-04-02
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.433 Å)
Cite:Rational Introduction of Electrostatic Interactions at Crystal Contacts to Enhance Protein Crystallization of an Ene Reductase.
Biomolecules, 15, 2025
9QGC
DownloadVisualize
BU of 9qgc by Molmil
Crystal structure of an NADH-accepting ene reductase variant NostocER1-L1,5 mutant Q204K
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, All1865 protein, ...
Authors:Bischoff, D, Walla, B, Janowski, R, Maslakova, A, Niessing, D, Weuster-Botz, D.
Deposit date:2025-03-13
Release date:2025-04-02
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.239 Å)
Cite:Rational Introduction of Electrostatic Interactions at Crystal Contacts to Enhance Protein Crystallization of an Ene Reductase.
Biomolecules, 15, 2025
9QGD
DownloadVisualize
BU of 9qgd by Molmil
Crystal structure of an NADH-accepting ene reductase variant NostocER1-L1,5 mutant Q350K
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, All1865 protein, ...
Authors:Bischoff, D, Walla, B, Janowski, R, Maslakova, A, Niessing, D, Weuster-Botz, D.
Deposit date:2025-03-13
Release date:2025-04-02
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.239 Å)
Cite:Rational Introduction of Electrostatic Interactions at Crystal Contacts to Enhance Protein Crystallization of an Ene Reductase.
Biomolecules, 15, 2025
9QGB
DownloadVisualize
BU of 9qgb by Molmil
Crystal structure of an NADH-accepting ene reductase variant NostocER1-L1,5 (engineered Loop Swap from Achromobacter sp. JA81)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, All1865 protein, ...
Authors:Bischoff, D, Walla, B, Janowski, R, Maslakova, A, Maehler, C, Niessing, D, Weuster-Botz, D.
Deposit date:2025-03-13
Release date:2025-04-02
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Rational Introduction of Electrostatic Interactions at Crystal Contacts to Enhance Protein Crystallization of an Ene Reductase.
Biomolecules, 15, 2025
7PV5
DownloadVisualize
BU of 7pv5 by Molmil
RBD domain of D. melanogaster tRNA (uracil-5-)-methyltransferase homolog A (TRMT2A)
Descriptor: CHLORIDE ION, FI05218p, SODIUM ION, ...
Authors:Witzenberger, M, Janowski, R, Niessing, D.
Deposit date:2021-10-01
Release date:2023-04-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the RNA-recognition motif of Drosophila melanogaster tRNA (uracil-5-)-methyltransferase homolog A
Acta Crystallogr.,Sect.F, 80, 2024
4E61
DownloadVisualize
BU of 4e61 by Molmil
Crystal structure of the EB1-like motif of Bim1p
Descriptor: Protein BIM1
Authors:Huels, D, Storchova, Z, Niessing, D.
Deposit date:2012-03-15
Release date:2012-04-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Post-translational Modifications Regulate Assembly of Early Spindle Orientation Complex in Yeast.
J.Biol.Chem., 287, 2012
5M0I
DownloadVisualize
BU of 5m0i by Molmil
Crystal structure of the nuclear complex with She2p and the ASH1 mRNA E3-localization element
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ASH1-E3 element, ...
Authors:Edelmann, F.T, Janowski, R, Niessing, D.
Deposit date:2016-10-05
Release date:2017-01-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Molecular architecture and dynamics of ASH1 mRNA recognition by its mRNA-transport complex.
Nat. Struct. Mol. Biol., 24, 2017
6TV7
DownloadVisualize
BU of 6tv7 by Molmil
Crystal structure of rsGCaMP in the OFF state (illuminated)
Descriptor: CALCIUM ION, SODIUM ION, rsGCaMP
Authors:Janowski, R, Fuenzalida-Werner, J.P, Mishra, K, Stiel, A.C, Niessing, D.
Deposit date:2020-01-09
Release date:2021-10-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Genetically encoded photo-switchable molecular sensors for optoacoustic and super-resolution imaging.
Nat.Biotechnol., 2021
6H0R
DownloadVisualize
BU of 6h0r by Molmil
X-ray structure of SRS2 fragment of Rgs4 3' UTR
Descriptor: BARIUM ION, MAGNESIUM ION, SRS2 fragment of Rgs4 3' UTR, ...
Authors:Heber, S, Janowski, R, Niessing, D.
Deposit date:2018-07-10
Release date:2019-04-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Staufen2-mediated RNA recognition and localization requires combinatorial action of multiple domains.
Nat Commun, 10, 2019
4QI0
DownloadVisualize
BU of 4qi0 by Molmil
X-ray structure of the ROQ domain from murine Roquin-1
Descriptor: 1,2-ETHANEDIOL, Roquin-1
Authors:Janowski, R, Schlundt, A, Sattler, M, Niessing, D.
Deposit date:2014-05-30
Release date:2014-07-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural basis for RNA recognition in roquin-mediated post-transcriptional gene regulation.
Nat.Struct.Mol.Biol., 21, 2014
6GQE
DownloadVisualize
BU of 6gqe by Molmil
X-ray structure of KH1-2 domain of IMP3
Descriptor: Insulin-like growth factor 2 mRNA-binding protein 3
Authors:Janowski, R, Schlundt, A, Sattler, M, Niessing, D.
Deposit date:2018-06-07
Release date:2019-04-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Combinatorial recognition of clustered RNA elements by the multidomain RNA-binding protein IMP3.
Nat Commun, 10, 2019
3N8B
DownloadVisualize
BU of 3n8b by Molmil
Crystal Structure of Borrelia burgdorferi Pur-alpha
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Uncharacterized protein
Authors:Graebsch, A, Roche, S, Kostrewa, D, Niessing, D.
Deposit date:2010-05-28
Release date:2010-10-06
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Of bits and bugs--on the use of bioinformatics and a bacterial crystal structure to solve a eukaryotic repeat-protein structure.
Plos One, 5, 2010
3NM7
DownloadVisualize
BU of 3nm7 by Molmil
Crystal Structure of Borrelia burgdorferi Pur-alpha
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Uncharacterized protein
Authors:Graebsch, A, Roche, S, Kostrewa, D, Niessing, D.
Deposit date:2010-06-22
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Of Bits and Bugs - on the use of bioinformatics and a bacterial crystal structure to solve a eukaryotic repeat-protein structure.
Plos One, 5, 2010
5F5F
DownloadVisualize
BU of 5f5f by Molmil
X-ray structure of Roquin ROQ domain in complex with a Selex-derived hexa-loop RNA motif
Descriptor: RNA (5'-R(P*UP*GP*AP*CP*UP*GP*CP*GP*UP*UP*UP*UP*AP*GP*GP*AP*GP*UP*UP*A)-3'), Roquin-1
Authors:Janowski, R, Schlundt, A, Sattler, M, Niessing, D.
Deposit date:2015-12-04
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Roquin recognizes a non-canonical hexaloop structure in the 3'-UTR of Ox40.
Nat Commun, 7, 2016
5F5H
DownloadVisualize
BU of 5f5h by Molmil
X-ray structure of Roquin ROQ domain in complex with Ox40 hexa-loop RNA motif
Descriptor: GLYCEROL, RNA (5'-R(P*CP*CP*AP*CP*AP*CP*CP*GP*UP*UP*CP*UP*AP*GP*GP*UP*GP*CP*UP*GP*G)-3'), Roquin-1
Authors:Janowski, R, Schlundt, A, Sattler, M, Niessing, D.
Deposit date:2015-12-04
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Roquin recognizes a non-canonical hexaloop structure in the 3'-UTR of Ox40.
Nat Commun, 7, 2016
4QI2
DownloadVisualize
BU of 4qi2 by Molmil
X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNA
Descriptor: RNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3'), Roquin-1
Authors:Janowski, R, Schlundt, A, Sattler, M, Niessing, D.
Deposit date:2014-05-30
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for RNA recognition in roquin-mediated post-transcriptional gene regulation.
Nat.Struct.Mol.Biol., 21, 2014
6TQA
DownloadVisualize
BU of 6tqa by Molmil
X-ray structure of Roquin ROQ domain in complex with a UCP3 CDE2 SL RNA motif
Descriptor: CHLORIDE ION, MAGNESIUM ION, RNA (5'-R(P*GP*GP*UP*GP*CP*CP*UP*AP*AP*UP*AP*UP*UP*UP*AP*GP*GP*CP*AP*CP*(CCC))-3'), ...
Authors:Binas, O, Tants, J.-N, Peter, S.A, Janowski, R, Davydova, E, Braun, J, Niessing, D, Schwalbe, H, Weigand, J.E, Schlundt, A.
Deposit date:2019-12-16
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the recognition of transiently structured AU-rich elements by Roquin.
Nucleic Acids Res., 48, 2020
7P7Y
DownloadVisualize
BU of 7p7y by Molmil
X-ray structure of Lactobacillus kefir alcohol dehydrogenase mutant Q126K
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Bischoff, D, Walla, B, Janowski, R, Niessing, D, Weuster-Botz, D.
Deposit date:2021-07-21
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Transfer of a Rational Crystal Contact Engineering Strategy between Diverse Alcohol Dehydrogenases
Crystals, 11, 2021
6TQB
DownloadVisualize
BU of 6tqb by Molmil
X-ray structure of Roquin ROQ domain in complex with a UCP3 CDE1 SL RNA motif
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Binas, O, Tants, J.-N, Peter, S.A, Janowski, R, Davydova, E, Braun, J, Niessing, D, Schwalbe, H, Weigand, J.E, Schlundt, A.
Deposit date:2019-12-16
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for the recognition of transiently structured AU-rich elements by Roquin.
Nucleic Acids Res., 48, 2020
8CHW
DownloadVisualize
BU of 8chw by Molmil
Crystal structure of human PURA (fragment Pro216-Lys280, PUR repeat III)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Transcriptional activator protein Pur-alpha
Authors:Janowski, R, Niessing, D.
Deposit date:2023-02-08
Release date:2024-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:PURA syndrome-causing mutations impair PUR-domain integrity and affect P-body association.
Elife, 13, 2024

 

123>

236371

PDB entries from 2025-05-21

PDB statisticsPDBj update infoContact PDBjnumon