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1DSD
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BU of 1dsd by Molmil
NMR STUDY OF DNA (5'-D(*GP*AP*TP*GP*CP*TP*TP*C)-3') T:T MISMATCHED DUPLEX COMPLEXED WITH ACTINOMYCIN D, MINIMIZED AVERAGE STRUCTURE
Descriptor: ACTINOMYCIN D, DNA (5'-D(*GP*AP*TP*GP*CP*TP*TP*C)-3')
Authors:Lian, C, Robinson, H, Wang, A.H.-J.
Deposit date:1996-08-10
Release date:1996-12-07
Last modified:2024-07-10
Method:SOLUTION NMR
Cite:Structure of Actinomycin D Bound with (Gaagcttc)2 and (Gatgcttc)2 and its Binding to the (Cag)N:(Ctg)N Triplet Sequence by NMR Analysis
J.Am.Chem.Soc., 118, 1996
1DSC
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BU of 1dsc by Molmil
NMR STUDY OF DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') SELF-COMPLEMENTARY DUPLEX COMPLEXED WITH ACTINOMYCIN D, MINIMIZED AVERAGE STRUCTURE
Descriptor: ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
Authors:Lian, C, Robinson, H, Wang, A.H.-J.
Deposit date:1996-08-10
Release date:1996-12-07
Last modified:2024-07-10
Method:SOLUTION NMR
Cite:Structure of Actinomycin D Bound with (Gaagcttc)2 and (Gatgcttc)2 and its Binding to the (Cag)N:(Ctg)N Triplet Sequence by NMR Analysis
J.Am.Chem.Soc., 118, 1996
1FYY
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BU of 1fyy by Molmil
HPRT GENE MUTATION HOTSPOT WITH A BPDE2(10R) ADDUCT
Descriptor: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 5'-D(*TP*GP*CP*CP*CP*TP*TP*GP*AP*CP*TP*A)-3', HPRT DNA WITH BENZO[A]PYRENE-ADDUCTED DA7
Authors:Volk, D.E, Rice, J.S, Luxon, B.A, Yeh, H.J.C, Liang, C, Xie, G, Sayer, J.M, Jerina, D.M, Gorenstein, D.G.
Deposit date:2000-10-03
Release date:2000-12-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR evidence for syn-anti interconversion of a trans opened (10R)-dA adduct of benzo[a]pyrene (7S,8R)-diol (9R,10S)-epoxide in a DNA duplex.
Biochemistry, 39, 2000
6YP7
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BU of 6yp7 by Molmil
PSII-LHCII C2S2 supercomplex from Pisum sativum grown in high light conditions
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Grinzato, A, Albanese, P, Zanotti, G, Pagliano, C.
Deposit date:2020-04-15
Release date:2020-11-25
Last modified:2020-12-02
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:High-Light versus Low-Light: Effects on Paired Photosystem II Supercomplex Structural Rearrangement in Pea Plants.
Int J Mol Sci, 21, 2020
3F3H
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BU of 3f3h by Molmil
Crystal structure and anti-tumor activity of LZ-8 from the fungus Ganoderma lucidium
Descriptor: Immunomodulatory protein Ling Zhi-8
Authors:Zhou, C.Z, Huang, L, He, Y.X, Bao, R, Sun, F, Liang, C, Liu, L.
Deposit date:2008-10-30
Release date:2009-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of LZ-8 from the medicinal fungus Ganoderma lucidium
Proteins, 75, 2009
8GNA
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BU of 8gna by Molmil
Structure of the SbCas7-11-crRNA-NTR complex
Descriptor: RAMP superfamily protein, RNA (32-MER), RNA (5'-R(P*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*GP*GP*U)-3'), ...
Authors:Yu, G, Wang, X, Deng, Z, Zhang, H.
Deposit date:2022-08-23
Release date:2023-01-18
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Target RNA-guided protease activity in type III-E CRISPR-Cas system.
Nucleic Acids Res., 50, 2022
8GU6
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BU of 8gu6 by Molmil
Structure of the SbCas7-11-crRNA-NTR-Csx29 complex
Descriptor: CHAT domain protein, RAMP superfamily protein, RNA (33-MER), ...
Authors:Yu, G, Wang, X, Deng, Z, Zhang, H.
Deposit date:2022-09-10
Release date:2023-01-18
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Target RNA-guided protease activity in type III-E CRISPR-Cas system.
Nucleic Acids Res., 50, 2022
8HF2
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BU of 8hf2 by Molmil
Cryo-EM structure of WeiTsing
Descriptor: PRA1 family protein
Authors:Qin, L, Tang, L.H, Chen, Y.H.
Deposit date:2022-11-09
Release date:2023-06-21
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:WeiTsing, a pericycle-expressed ion channel, safeguards the stele to confer clubroot resistance.
Cell, 186, 2023
8WGW
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BU of 8wgw by Molmil
Local refinement of RBD-ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Wei, X, Zhang, Z.
Deposit date:2023-09-22
Release date:2024-02-28
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The receptor binding domain of SARS-CoV-2 Omicron subvariants targets Siglec-9 to decrease its immunogenicity by preventing macrophage phagocytosis.
Nat.Immunol., 25, 2024
8WGV
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BU of 8wgv by Molmil
BA.2(S375) Spike (S6P)/hACE2 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Wei, X, Zhang, Z.
Deposit date:2023-09-22
Release date:2024-02-28
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:The receptor binding domain of SARS-CoV-2 Omicron subvariants targets Siglec-9 to decrease its immunogenicity by preventing macrophage phagocytosis.
Nat.Immunol., 25, 2024
7YTL
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BU of 7ytl by Molmil
Structure of a oxidoreductase in complex with quinone
Descriptor: Apoptosis inducing factor mitochondria associated 2, FLAVIN-ADENINE DINUCLEOTIDE, UBIQUINONE-1
Authors:Lv, Y, Sun, Q, Wang, Q, Zhu, D.
Deposit date:2022-08-15
Release date:2023-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural insights into FSP1 catalysis and ferroptosis inhibition.
Nat Commun, 14, 2023
8AWW
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BU of 8aww by Molmil
Transthyretin conjugated with a tafamidis derivative
Descriptor: Transthyretin, ~{N}-(6-azanylhexyl)-2-[3,5-bis(chloranyl)phenyl]-1,3-benzoxazole-6-carboxamide
Authors:Cerofolini, L, Vasa, K, Bianconi, E, Salobehaj, M, Cappelli, G, Licciardi, G, Perez-Rafols, A, Padilla Cortes, L.D, Antonacci, S, Rizzo, D, Ravera, E, Calderone, V, Parigi, G, Luchinat, C, Macchiarulo, A, Menichetti, S, Fragai, M.
Deposit date:2022-08-30
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Combining Solid-State NMR with Structural and Biophysical Techniques to Design Challenging Protein-Drug Conjugates.
Angew.Chem.Int.Ed.Engl., 62, 2023
9EOU
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BU of 9eou by Molmil
Crystal Structure of the b1b2 domains from Human Neuropilin-1 in complex with a peptide.
Descriptor: Neuropilin-1, Osteopontin
Authors:Caing-Carlsson, R, Duelli, A, Walse, B.
Deposit date:2024-03-15
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Identification of an osteopontin-derived peptide that binds neuropilin-1 and activates vascular repair responses and angiogenesis.
Pharmacol Res, 205, 2024
6AZ0
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BU of 6az0 by Molmil
Mitochondrial ATPase Protease YME1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Puchades, C, Rampello, A.J, Shin, M, Giuliano, C, Wiseman, R.L, Glynn, S.E, Lander, G.C.
Deposit date:2017-09-09
Release date:2017-11-15
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of the mitochondrial inner membrane AAA+ protease YME1 gives insight into substrate processing.
Science, 358, 2017
5NEW
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BU of 5new by Molmil
RNA-RNA base stacking in the crystal structure of an Hfq6:RNA dimer
Descriptor: RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*U)-3'), RNA-binding protein Hfq, ...
Authors:Schulz, E.C, Barabas, O.
Deposit date:2017-03-12
Release date:2017-10-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.511 Å)
Cite:Intermolecular base stacking mediates RNA-RNA interaction in a crystal structure of the RNA chaperone Hfq.
Sci Rep, 7, 2017
5CR4
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BU of 5cr4 by Molmil
Crystal structure of the Sleeping Beauty transposase catalytic domain
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CITRIC ACID, GLYCEROL, ...
Authors:Voigt, F, Barabas, O.
Deposit date:2015-07-22
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Sleeping Beauty transposase structure allows rational design of hyperactive variants for genetic engineering.
Nat Commun, 7, 2016
2XWY
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BU of 2xwy by Molmil
Structure of MK-3281, a Potent Non-Nucleoside Finger-Loop Inhibitor, in complex with the Hepatitis C Virus NS5B Polymerase
Descriptor: (7R)-14-cyclohexyl-7-{[2-(dimethylamino)ethyl](methyl)amino}-7,8-dihydro-6H-indolo[1,2-e][1,5]benzoxazocine-11-carboxylic acid, MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Di Marco, S, Baiocco, P.
Deposit date:2010-11-06
Release date:2010-12-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Discovery of (7R)-14-Cyclohexyl-7-{[2-(Dimethylamino)Ethyl] (Methyl)Amino}-7,8-Dihydro-6H-Indolo[1,2-E][1,5] Benzoxazocine -11-Carboxylic Acid (Mk-3281), a Potent and Orally Bioavailable Finger-Loop Inhibitor of the Hepatitis C Virus Ns5B Polymerase
J.Med.Chem., 54, 2011
3EBN
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BU of 3ebn by Molmil
A Special Dimerization of SARS-CoV Main Protease C-Terminal Domain Due to Domain-swapping
Descriptor: Replicase polyprotein 1ab
Authors:Zhong, N, Zhang, S, Xue, F, Kang, X, Lou, Z, Xia, B.
Deposit date:2008-08-28
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:C-terminal domain of SARS-CoV main protease can form a 3D domain-swapped dimer
PROTEIN SCI., 18, 2009
6FI8
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BU of 6fi8 by Molmil
Crystal structure of the IS608 transposase in complex with left end 29-mer DNA hairpin and a 6-mer DNA representing the intact target site: pre-cleavage target capture complex
Descriptor: CALCIUM ION, DNA 29-MER (LE29), DNA 6-MER (T6'), ...
Authors:Morero, N.R, Barabas, O.
Deposit date:2018-01-17
Release date:2018-03-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Targeting IS608 transposon integration to highly specific sequences by structure-based transposon engineering.
Nucleic Acids Res., 46, 2018
6ITE
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BU of 6ite by Molmil
Crystal structure of group A Streptococcal surface dehydrogenase (SDH)
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
Authors:Yuan, C, Li, R, Huang, M.D.
Deposit date:2018-11-21
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.739 Å)
Cite:Structural determination of group A Streptococcal surface dehydrogenase and characterization of its interaction with urokinase-type plasminogen activator receptor.
Biochem.Biophys.Res.Commun., 510, 2019
2KLQ
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BU of 2klq by Molmil
The solution structure of CBD of human MCM6
Descriptor: DNA replication licensing factor MCM6
Authors:Liu, C.
Deposit date:2009-07-08
Release date:2010-03-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Characterization and structure determination of the Cdt1 binding domain of human minichromosome maintenance (Mcm) 6
J.Biol.Chem., 285, 2010
2LE8
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BU of 2le8 by Molmil
The protein complex for DNA replication
Descriptor: DNA replication factor Cdt1, DNA replication licensing factor MCM6
Authors:Liu, C, Wei, Z, Zhu, G.
Deposit date:2011-06-14
Release date:2012-12-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights into the Cdt1-mediated MCM2-7 chromatin loading
Nucleic Acids Res., 40, 2012
2K7X
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BU of 2k7x by Molmil
solution structure of C-terminal domain of SARS-CoV main protease
Descriptor: SARS-CoV main protease
Authors:Xia, B, Zhong, N.
Deposit date:2008-08-28
Release date:2009-05-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:C-terminal domain of SARS-CoV main protease can form a 3D domain-swapped dimer.
Protein Sci., 18, 2009
2XA0
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BU of 2xa0 by Molmil
Crystal structure of BCL-2 in complex with a BAX BH3 peptide
Descriptor: APOPTOSIS REGULATOR BAX, APOPTOSIS REGULATOR BCL-2
Authors:Ku, B, Oh, B.H.
Deposit date:2010-03-25
Release date:2010-11-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Evidence that Inhibition of Bax Activation by Bcl- 2 Involves its Tight and Preferential Interaction with the Bh3 Domain of Bax.
Cell Res., 21, 2011
3BL2
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BU of 3bl2 by Molmil
Crystal Structure of M11, the BCL-2 Homolog of Murine Gamma-herpesvirus 68, Complexed with Mouse Beclin1 (residues 106-124)
Descriptor: Beclin-1, V-bcl-2
Authors:Oh, B.-H, Woo, J.-S, Ku, B.
Deposit date:2007-12-10
Release date:2008-02-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Biochemical Bases for the Inhibition of Autophagy and Apoptosis by Viral BCL-2 of Murine gamma-Herpesvirus 68
Plos Pathog., 4, 2008

 

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