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2N7R
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BU of 2n7r by Molmil
Structure of the transmembrane domain of human nicastrin in DPC micelles
Descriptor: Nicastrin
Authors:Li, Y, Liew, L, Li, Q, Kang, C.
Deposit date:2015-09-17
Release date:2016-04-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the transmembrane domain of human nicastrin-a component of gamma-secretase
Sci Rep, 6, 2016
2N7Q
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BU of 2n7q by Molmil
Structure of the transmembrane domain of human nicastrin in SDS micelles
Descriptor: Nicastrin
Authors:Li, Y, Liew, L, Li, Q, Kang, C.
Deposit date:2015-09-17
Release date:2016-04-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the transmembrane domain of human nicastrin-a component of gamma-secretase
Sci Rep, 6, 2016
6O59
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BU of 6o59 by Molmil
Crystal structure of the N-terminal domain of the A subunit of the Bacillus megaterium spore germinant receptor GerK3
Descriptor: Germination protein
Authors:Li, Y, Hao, B.
Deposit date:2019-03-01
Release date:2019-05-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural and functional analyses of the N-terminal domain of the A subunit of aBacillus megateriumspore germinant receptor.
Proc.Natl.Acad.Sci.USA, 116, 2019
6QNX
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BU of 6qnx by Molmil
Structure of the SA2/SCC1/CTCF complex
Descriptor: Cohesin subunit SA-2, Double-strand-break repair protein rad21 homolog, Transcriptional repressor CTCF
Authors:Li, Y, Muir, K.W, Panne, D.
Deposit date:2019-02-12
Release date:2020-01-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structural basis for cohesin-CTCF-anchored loops.
Nature, 578, 2020
1DTL
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BU of 1dtl by Molmil
CRYSTAL STRUCTURE OF CALCIUM-SATURATED (3CA2+) CARDIAC TROPONIN C COMPLEXED WITH THE CALCIUM SENSITIZER BEPRIDIL AT 2.15 A RESOLUTION
Descriptor: 1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE, CALCIUM ION, CARDIAC TROPONIN C
Authors:Li, Y, Love, M.L, Putkey, J.A, Cohen, C.
Deposit date:2000-01-12
Release date:2000-05-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Bepridil opens the regulatory N-terminal lobe of cardiac troponin C.
Proc.Natl.Acad.Sci.USA, 97, 2000
1XGR
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BU of 1xgr by Molmil
Structure for antibody HyHEL-63 Y33I mutant complexed with hen egg lysozyme
Descriptor: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
Authors:Li, Y, Huang, Y, Swaminathan, C.P, Smith-Gill, S.J, Mariuzza, R.A.
Deposit date:2004-09-17
Release date:2005-09-06
Last modified:2013-10-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
1XGU
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BU of 1xgu by Molmil
Structure for antibody HyHEL-63 Y33F mutant complexed with hen egg lysozyme
Descriptor: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
Authors:Li, Y, Huang, Y, Swaminathan, C.P, Smith-Gill, S.J, Mariuzza, R.A.
Deposit date:2004-09-17
Release date:2005-09-06
Last modified:2013-10-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
6U18
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BU of 6u18 by Molmil
Directed evolution of a biosensor selective for the macrolide antibiotic clarithromycin
Descriptor: CITRATE ANION, CLARITHROMYCIN, Erythromycin resistance repressor protein
Authors:Li, Y, Reed, M, Wright, H.T, Cropp, T.A, Williams, G.
Deposit date:2019-08-15
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of Genetically Encoded Biosensors for Reporting the Methyltransferase-Dependent Biosynthesis of Semisynthetic Macrolide Antibiotics.
Acs Synth Biol, 2021
8F2E
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BU of 8f2e by Molmil
Crystal Structure of the CoV-Y domain of SARS-CoV-2 Nonstructural Protein 3
Descriptor: GLYCEROL, Papain-like protease nsp3
Authors:Li, Y, Shi, W, Hao, B.
Deposit date:2022-11-07
Release date:2023-03-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystal structure of the CoV-Y domain of SARS-CoV-2 nonstructural protein 3.
Sci Rep, 13, 2023
1ZGL
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BU of 1zgl by Molmil
Crystal structure of 3A6 TCR bound to MBP/HLA-DR2a
Descriptor: HLA class II histocompatibility antigen, DR alpha chain, Myelin basic protein, ...
Authors:Li, Y, Huang, Y, Lue, J, Quandt, J.A, Martin, R, Mariuzza, R.A.
Deposit date:2005-04-21
Release date:2005-10-18
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a human autoimmune TCR bound to a myelin basic protein self-peptide and a multiple sclerosis-associated MHC class II molecule.
Embo J., 24, 2005
2M19
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BU of 2m19 by Molmil
Solution structure of the Haloferax volcanii HVO 2177 protein
Descriptor: Molybdopterin converting factor subunit 1
Authors:Li, Y, Maciejewski, M.W, Martin, J, Jin, K, Zhang, Y, Lu, M, Maupin-Furlow, J.A, Hao, B.
Deposit date:2012-11-21
Release date:2013-08-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Crystal structure of the ubiquitin-like small archaeal modifier protein 2 from Haloferax volcanii.
Protein Sci., 22, 2013
3HHS
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BU of 3hhs by Molmil
Crystal Structure of Manduca sexta prophenoloxidase
Descriptor: COPPER (II) ION, Phenoloxidase subunit 1, Phenoloxidase subunit 2
Authors:Li, Y, Wang, Y, Jiang, H, Deng, J.
Deposit date:2009-05-17
Release date:2009-09-29
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of Manduca sexta prophenoloxidase provides insights into the mechanism of type 3 copper enzymes.
Proc.Natl.Acad.Sci.USA, 106, 2009
3JBB
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BU of 3jbb by Molmil
Characterization of red-shifted phycobiliprotein complexes isolated from the chlorophyll f-containing cyanobacterium Halomicronema hongdechloris
Descriptor: PHYCOCYANOBILIN, SULFATE ION, allophycocyanin beta chain, ...
Authors:Li, Y, Lin, Y, Garvey, C, Birch, D, Corkery, R.W, Loughlin, P.C, Scheer, H, Willows, R.D, Chen, M.
Deposit date:2015-08-26
Release date:2015-11-11
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (26 Å)
Cite:Characterization of red-shifted phycobilisomes isolated from the chlorophyll f-containing cyanobacterium Halomicronema hongdechloris.
Biochim.Biophys.Acta, 1857, 2015
1XGP
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BU of 1xgp by Molmil
Structure for antibody HyHEL-63 Y33A mutant complexed with hen egg lysozyme
Descriptor: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
Authors:Li, Y, Mariuzza, R.A.
Deposit date:2004-09-17
Release date:2005-09-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
1XGT
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BU of 1xgt by Molmil
Structure for antibody HyHEL-63 Y33L mutant complexed with hen egg lysozyme
Descriptor: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
Authors:Li, Y, Mariuzza, R.A.
Deposit date:2004-09-17
Release date:2005-09-06
Last modified:2013-10-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
1XGQ
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BU of 1xgq by Molmil
Structure for antibody HyHEL-63 Y33V mutant complexed with hen egg lysozyme
Descriptor: Lysozyme C, antibody kappa heavy chain, antibody kappa light chain
Authors:Li, Y, Mariuzza, R.A.
Deposit date:2004-09-17
Release date:2005-09-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces
Structure, 13, 2005
5VHG
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BU of 5vhg by Molmil
Crystal structure of pentad mutant GAPR-1
Descriptor: Golgi-associated plant pathogenesis-related protein 1, SULFATE ION
Authors:Li, Y, Zhao, Y, Su, M, Chakravarthy, S, Colbert, C.L, Levine, B, Sinha, S.C.
Deposit date:2017-04-13
Release date:2017-09-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structural insights into the interaction of the conserved mammalian proteins GAPR-1 and Beclin 1, a key autophagy protein.
Acta Crystallogr D Struct Biol, 73, 2017
1KQL
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BU of 1kql by Molmil
Crystal structure of the C-terminal region of striated muscle alpha-tropomyosin at 2.7 angstrom resolution
Descriptor: Fusion Protein of and striated muscle alpha-tropomyosin and the GCN4 leucine zipper
Authors:Li, Y, Mui, S, Brown, J.H, Strand, J, Reshetnikova, L, Tobacman, L.S, Cohen, C.
Deposit date:2002-01-07
Release date:2002-05-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure of the C-terminal fragment of striated-muscle alpha-tropomyosin reveals a key troponin T recognition site.
Proc.Natl.Acad.Sci.USA, 99, 2002
1KGD
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BU of 1kgd by Molmil
Crystal Structure of the Guanylate Kinase-like Domain of Human CASK
Descriptor: FORMIC ACID, PERIPHERAL PLASMA MEMBRANE CASK
Authors:Li, Y, Spangenberg, O, Paarmann, I, Konrad, M, Lavie, A.
Deposit date:2001-11-26
Release date:2001-12-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.314 Å)
Cite:Structural basis for nucleotide-dependent regulation of membrane-associated guanylate kinase-like domains.
J.Biol.Chem., 277, 2002
4XVJ
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BU of 4xvj by Molmil
STRUCTURE OF THE HEPATITIS C VIRUS ENVELOPE GLYCOPROTEIN E2 ANTIGENIC 2 REGION 412-423 BOUND TO THE BROADLY NEUTRALIZING ANTIBODY HC33.1
Descriptor: HCV E2 antigen, antibody heavy chain variable domain, antibody light chain variable domain
Authors:Li, Y, Mariuzza, R.A.
Deposit date:2015-01-27
Release date:2015-03-11
Last modified:2016-12-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for penetration of the glycan shield of hepatitis C virus e2 glycoprotein by a broadly neutralizing human antibody.
J.Biol.Chem., 290, 2015
1NKN
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BU of 1nkn by Molmil
VISUALIZING AN UNSTABLE COILED COIL: THE CRYSTAL STRUCTURE OF AN N-TERMINAL SEGMENT OF THE SCALLOP MYOSIN ROD
Descriptor: S2N51-GCN4
Authors:Li, Y, Brown, J.H, Reshetnikova, L, Blazsek, A, Farkas, L, Nyitray, L, Cohen, C.
Deposit date:2003-01-03
Release date:2003-07-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Visualization of an unstable coiled coil from the scallop myosin rod
Nature, 424, 2003
5DO2
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BU of 5do2 by Molmil
Complex structure of MERS-RBD bound with 4C2 antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4C2 heavy chain, 4C2 light chain, ...
Authors:Li, Y, Wan, Y, Liu, P, Zhao, J, Lu, G, Qi, J, Wang, Q, Lu, X, Wu, Y, Liu, W, Yuen, K.Y, Perlman, S, Gao, G.F, Yan, J.
Deposit date:2015-09-10
Release date:2015-10-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.409 Å)
Cite:A humanized neutralizing antibody against MERS-CoV targeting the receptor-binding domain of the spike protein.
Cell Res., 25, 2015
4P5A
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BU of 4p5a by Molmil
Crystal structure of a UMP/dUMP methylase PolB from Streptomyces cacaoi bound with 5-Br UMP
Descriptor: 5-BROMO-URIDINE-5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase ThyX
Authors:Li, Y, Chen, W, Li, J, Xia, Z, Deng, Z, Zhou, J.
Deposit date:2014-03-15
Release date:2015-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of a UMP/dUMP methylase PolB from Streptomyces cacaoi with 5-Br UMP
To Be Published
4P5B
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BU of 4p5b by Molmil
Crystal structure of a UMP/dUMP methylase PolB from Streptomyces cacaoi bound with 5-Br dUMP
Descriptor: 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Li, Y, Chen, W, Li, J, Xia, Z, Deng, Z, Zhou, J.
Deposit date:2014-03-15
Release date:2015-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.274 Å)
Cite:Crystal structure of a UMP/dUMP methylase PolB form Streptomyces cacaoi bound with 5-Br dUMP
To Be Published
8JYY
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BU of 8jyy by Molmil
Crystal structure of the gasdermin-like protein RCD-1-2 from Neurospora crassa
Descriptor: RCD-1-2
Authors:Li, Y, Hou, Y.J, Ding, J.
Deposit date:2023-07-04
Release date:2024-05-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science, 2024

220113

數據於2024-05-22公開中

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