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6O59
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BU of 6o59 by Molmil
Crystal structure of the N-terminal domain of the A subunit of the Bacillus megaterium spore germinant receptor GerK3
Descriptor: Germination protein
Authors:Li, Y, Hao, B.
Deposit date:2019-03-01
Release date:2019-05-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural and functional analyses of the N-terminal domain of the A subunit of aBacillus megateriumspore germinant receptor.
Proc.Natl.Acad.Sci.USA, 116, 2019
4G7R
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BU of 4g7r by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase mutant V236A from Thermus thermophilus
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Li, Y, Chen, Y, Stout, C.D.
Deposit date:2012-07-20
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structure of Recombinant Cytochrome ba3 Oxidase mutant V236A from Thermus thermophilus
To be Published
4JNT
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BU of 4jnt by Molmil
Crystal structure of the ectodomain of Bovine viral diarrhea virus 1 E2 envelope protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2
Authors:Li, Y, Wang, J, Modis, Y.
Deposit date:2013-03-15
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (4.09 Å)
Cite:Crystal structure of glycoprotein E2 from bovine viral diarrhea virus.
Proc.Natl.Acad.Sci.USA, 110, 2013
4G71
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BU of 4g71 by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase mutant V236N from Thermus thermophilus
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CU(I)-S-MO(IV)(=O)O-NBIC CLUSTER, Cytochrome c oxidase polypeptide 2A, ...
Authors:Li, Y, Chen, Y, Stout, C.D.
Deposit date:2012-07-19
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of Recombinant Cytochrome ba3 Oxidase mutant V236N from Thermus thermophilus
To be Published
4G70
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BU of 4g70 by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase mutant V236T from Thermus thermophilus
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Li, Y, Chen, Y, Stout, C.D.
Deposit date:2012-07-19
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Recombinant Cytochrome ba3 Oxidase mutant V236T from Thermus thermophilus
To be Published
4G7S
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BU of 4g7s by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase mutant V236I from Thermus thermophilus
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Li, Y, Chen, Y, Stout, C.D.
Deposit date:2012-07-20
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Recombinant Cytochrome ba3 Oxidase mutant V236I from Thermus thermophilus
To be Published
6U18
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BU of 6u18 by Molmil
Directed evolution of a biosensor selective for the macrolide antibiotic clarithromycin
Descriptor: CITRATE ANION, CLARITHROMYCIN, Erythromycin resistance repressor protein
Authors:Li, Y, Reed, M, Wright, H.T, Cropp, T.A, Williams, G.
Deposit date:2019-08-15
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of Genetically Encoded Biosensors for Reporting the Methyltransferase-Dependent Biosynthesis of Semisynthetic Macrolide Antibiotics.
Acs Synth Biol, 2021
4KWE
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BU of 4kwe by Molmil
GDP-bound, double-stranded, curved FtsZ protofilament structure
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
Authors:Li, Y, Hsin, J, Zhao, L, Cheng, Y, Shang, W, Huang, K.C, Wang, H.W, Ye, S.
Deposit date:2013-05-23
Release date:2013-07-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:FtsZ protofilaments use a hinge-opening mechanism for constrictive force generation
Science, 341, 2013
3FF7
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BU of 3ff7 by Molmil
Structure of NK cell receptor KLRG1 bound to E-cadherin
Descriptor: ACETIC ACID, Epithelial cadherin, Killer cell lectin-like receptor subfamily G member 1
Authors:Li, Y, Mariuzza, R.A.
Deposit date:2008-12-02
Release date:2009-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of natural killer cell receptor KLRG1 bound to E-cadherin reveals basis for MHC-independent missing self recognition.
Immunity, 31, 2009
3FF9
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BU of 3ff9 by Molmil
Structure of NK cell receptor KLRG1
Descriptor: Killer cell lectin-like receptor subfamily G member 1
Authors:Li, Y, Mariuzza, R.A.
Deposit date:2008-12-02
Release date:2009-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of natural killer cell receptor KLRG1 bound to E-cadherin reveals basis for MHC-independent missing self recognition.
Immunity, 31, 2009
3CS8
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BU of 3cs8 by Molmil
Structural and Biochemical Basis for the Binding Selectivity of PPARg to PGC-1a
Descriptor: 2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL), PGC-1alfa peptide, ...
Authors:Li, Y, Martynowski, D.
Deposit date:2008-04-09
Release date:2008-06-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and biochemical basis for the binding selectivity of peroxisome proliferator-activated receptor gamma to PGC-1alpha.
J.Biol.Chem., 283, 2008
3FF8
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BU of 3ff8 by Molmil
Structure of NK cell receptor KLRG1 bound to E-cadherin
Descriptor: CALCIUM ION, Epithelial cadherin, Killer cell lectin-like receptor subfamily G member 1
Authors:Li, Y, Mariuzza, R.A.
Deposit date:2008-12-02
Release date:2009-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of natural killer cell receptor KLRG1 bound to E-cadherin reveals basis for MHC-independent missing self recognition.
Immunity, 31, 2009
4N4Y
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BU of 4n4y by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase mutant G232V from Thermus thermophilus
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Li, Y, Chen, Y, Stout, C.D.
Deposit date:2013-10-08
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of Recombinant Cytochrome ba3 Oxidase mutant G232V from Thermus thermophilus
To be Published
4G72
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BU of 4g72 by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase mutant V236M from Thermus thermophilus
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Li, Y, Chen, Y, Stout, C.D.
Deposit date:2012-07-19
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Structure of Recombinant Cytochrome ba3 Oxidase mutant V236M from Thermus thermophilus
To be Published
4G7Q
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BU of 4g7q by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase mutant V236L from Thermus thermophilus
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Li, Y, Chen, Y, Stout, C.D.
Deposit date:2012-07-20
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Recombinant Cytochrome ba3 Oxidase mutant V236L from Thermus thermophilus
To be Published
1SL0
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BU of 1sl0 by Molmil
Ternary 3' complex of T7 DNA polymerase with a DNA primer/template containing a disordered cis-syn thymine dimer on the template and an incoming nucleotide
Descriptor: 2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*CP*CP*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*(2DT))-3', ...
Authors:Li, Y, Dutta, S, Doublie, S, Bdour, H.M, Taylor, J.S, Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1WPA
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BU of 1wpa by Molmil
1.5 Angstrom crystal structure of human occludin fragment 413-522
Descriptor: Occludin
Authors:Li, Y, Lavie, A, Fanning, A.S, Anderson, J.M.
Deposit date:2004-09-01
Release date:2005-09-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the conserved cytoplasmic C-terminal domain of occludin: identification of the ZO-1 binding surface.
J.Mol.Biol., 352, 2005
6A3V
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BU of 6a3v by Molmil
Complex structure of human 4-1BB and 4-1BBL
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Tumor necrosis factor ligand superfamily member 9, Tumor necrosis factor receptor superfamily member 9
Authors:Li, Y, Zhang, C, Chai, Y, Qi, J, Tien, P, Gao, S, Gao, G.F.
Deposit date:2018-06-17
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.391 Å)
Cite:Limited Cross-Linking of 4-1BB by 4-1BB Ligand and the Agonist Monoclonal Antibody Utomilumab.
Cell Rep, 25, 2018
6A3W
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BU of 6a3w by Molmil
Complex structure of 4-1BB and utomilumab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Tumor necrosis factor receptor superfamily member 9, utomilumab VH, ...
Authors:Li, Y, Tan, S, Zhang, C, Chai, Y, Qi, J, Tien, P, Gao, S, Gao, G.F.
Deposit date:2018-06-17
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Limited Cross-Linking of 4-1BB by 4-1BB Ligand and the Agonist Monoclonal Antibody Utomilumab.
Cell Rep, 25, 2018
1SL2
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BU of 1sl2 by Molmil
Ternary 5' complex of T7 DNA polymerase with a DNA primer/template containing a cis-syn thymine dimer on the template and an incoming nucleotide
Descriptor: 2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*CP*CP*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*TP*(2DA))-3', ...
Authors:Li, Y, Dutta, S, Doublie, S, Bdour, H.M, Taylor, J.S, Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1XOO
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BU of 1xoo by Molmil
NMR structure of G1S mutant of influenza hemagglutinin fusion peptide in DPC micelles at pH 5
Descriptor: Hemagglutinin
Authors:Li, Y, Han, X, Lai, A.L, Bushweller, J.H, Cafiso, D.S, Tamm, L.K.
Deposit date:2004-10-06
Release date:2005-09-27
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Membrane structures of the hemifusion-inducing fusion peptide mutant G1S and the fusion-blocking mutant G1V of influenza virus hemagglutinin suggest a mechanism for pore opening in membrane fusion.
J.Virol., 79, 2005
1XOP
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BU of 1xop by Molmil
NMR structure of G1V mutant of influenza hemagglutinin fusion peptide in DPC micelles at pH 5
Descriptor: Hemagglutinin
Authors:Li, Y, Han, X, Lai, A.L, Bushweller, J.H, Cafiso, D.S, Tamm, L.K.
Deposit date:2004-10-06
Release date:2005-09-27
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Membrane structures of the hemifusion-inducing fusion peptide mutant G1S and the fusion-blocking mutant G1V of influenza virus hemagglutinin suggest a mechanism for pore opening in membrane fusion.
J.Virol., 79, 2005
1XAW
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BU of 1xaw by Molmil
crystal structure of the cytoplasmic distal C-terminal domain of occludin
Descriptor: Occludin
Authors:Li, Y, Fanning, A.S, Anderson, J.M, Lavie, A.
Deposit date:2004-08-26
Release date:2005-09-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of the Conserved Cytoplasmic C-terminal Domain of Occludin: Identification of the ZO-1 Binding Surface.
J.Mol.Biol., 352, 2005
2HQ4
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BU of 2hq4 by Molmil
Crystal Structure of ORF 1580 a hypothetical protein from Pyrococcus horikoshii
Descriptor: Hypothetical protein PH1570
Authors:Li, Y, Marshall, M, Chang, J, Zhao, M, Zhang, M, Xu, H, Liu, Z.J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2006-07-18
Release date:2006-09-19
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Crystal Structure of ORF 1580 a hypothetical protein from Pyrococcus horikoshii
To be Published
1YP0
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BU of 1yp0 by Molmil
Structure of the steroidogenic factor-1 ligand binding domain bound to phospholipid and a SHP peptide motif
Descriptor: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, Nuclear receptor subfamily 0, group B, ...
Authors:Li, Y, Choi, M, Cavey, G, Daugherty, J, Suino, K, Kovach, A, Bingham, N, Kliewer, S, Xu, H.
Deposit date:2005-01-28
Release date:2005-04-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystallographic identification and functional characterization of phospholipids as ligands for the orphan nuclear receptor steroidogenic factor-1.
Mol.Cell, 17, 2005

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