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8SMG
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BU of 8smg by Molmil
Structure of SPO1 phage Tad2 in complex with 1''-2' gcADPR
Descriptor: (1S,3R,4R,6R,9S,11R,14R,15S,16R,18R)-4-(6-amino-9H-purin-9-yl)-9,11,15,16,18-pentahydroxy-2,5,8,10,12,17-hexaoxa-9lambda~5~,11lambda~5~-diphosphatricyclo[12.2.1.1~3,6~]octadecane-9,11-dione, Gp34.65
Authors:Lu, A, Yirmiya, E, Leavitt, A, Avraham, C, Osterman, I, Garb, J, Antine, S.P, Mooney, S.E, Hobbs, S.J, Amitai, G, Sorek, R, Kranzusch, P.J.
Deposit date:2023-04-26
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Phages overcome bacterial immunity via diverse anti-defence proteins.
Nature, 625, 2024
8SMD
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BU of 8smd by Molmil
Structure of Clostridium botulinum prophage Tad1 in complex with 1''-3' gcADPR
Descriptor: (2R,3R,3aS,5S,6R,7S,8R,11R,13S,15aR)-2-(6-amino-9H-purin-9-yl)-3,6,7,11,13-pentahydroxyoctahydro-2H,5H,11H,13H-5,8-epoxy-11lambda~5~,13lambda~5~-furo[2,3-g][1,3,5,9,2,4]tetraoxadiphosphacyclotetradecine-11,13-dione, ABC transporter ATPase
Authors:Lu, A, Yirmiya, E, Leavitt, A, Avraham, C, Osterman, I, Garb, J, Antine, S.P, Mooney, S.E, Hobbs, S.J, Amitai, G, Sorek, R, Kranzusch, P.J.
Deposit date:2023-04-26
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Phages overcome bacterial immunity via diverse anti-defence proteins.
Nature, 625, 2024
8SM3
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BU of 8sm3 by Molmil
Structure of Bacillus cereus VD045 Gabija GajA-GajB Complex
Descriptor: Endonuclease GajA, Gabija protein GajB, SULFATE ION
Authors:Antine, S.P, Mooney, S.E, Johnson, A.G, Kranzusch, P.J.
Deposit date:2023-04-25
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of Gabija anti-phage defence and viral immune evasion.
Nature, 625, 2024
5I4A
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BU of 5i4a by Molmil
X-ray crystal structure of Marinitoga piezophila Argonaute in complex with 5' OH guide RNA
Descriptor: Argonaute protein, RNA (5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*U)-3')
Authors:Doxzen, K.W, Kaya, E, Knoll, K.R, Wilson, R.C, Strutt, S.C, Kranzusch, P.J, Doudna, J.A.
Deposit date:2016-02-11
Release date:2016-03-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:A bacterial Argonaute with noncanonical guide RNA specificity.
Proc.Natl.Acad.Sci.USA, 113, 2016
4P6I
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BU of 4p6i by Molmil
Crystal structure of the Cas1-Cas2 complex from Escherichia coli
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2
Authors:Nunez, J.K, Kranzusch, P.J, Noeske, J, Doudna, J.A.
Deposit date:2014-03-24
Release date:2014-05-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cas1-Cas2 complex formation mediates spacer acquisition during CRISPR-Cas adaptive immunity.
Nat.Struct.Mol.Biol., 21, 2014
5UQD
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BU of 5uqd by Molmil
DPY-21 in complex with Fe(II) and alpha-Ketoglutarate
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-OXOGLUTARIC ACID, DumPY: shorter than wild-type, ...
Authors:Brejc, K, Bian, Q, Uzawa, S, Wheeler, B.S, Anderson, E.C, King, D.S, Kranzusch, P.J, Preston, C.G, Meyer, B.J.
Deposit date:2017-02-07
Release date:2017-09-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Dynamic Control of X Chromosome Conformation and Repression by a Histone H4K20 Demethylase.
Cell, 171, 2017
5VGB
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BU of 5vgb by Molmil
Crystal structure of NmeCas9 HNH domain bound to anti-CRISPR AcrIIC1
Descriptor: Anti-CRISPR protein (AcrIIC1), CRISPR-associated endonuclease Cas9, GLYCEROL, ...
Authors:Harrington, L.B, Doxzen, K.W, Ma, E, Knott, G.J, Kranzusch, P.J, Doudna, J.A.
Deposit date:2017-04-10
Release date:2017-08-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.497 Å)
Cite:A Broad-Spectrum Inhibitor of CRISPR-Cas9.
Cell, 170, 2017
8SS1
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BU of 8ss1 by Molmil
Structure of a bacterial death-like domain from Azospirillum sp.
Descriptor: Serine protease
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2023-05-08
Release date:2023-06-07
Last modified:2023-07-19
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:CARD-like domains mediate anti-phage defense in bacterial gasdermin systems.
Biorxiv, 2023
8SRZ
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BU of 8srz by Molmil
Structure of a bacterial death-like domain from Lysobacter enzymogenes
Descriptor: Probable serine protease FE772_23065
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2023-05-08
Release date:2023-06-07
Last modified:2023-07-19
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:CARD-like domains mediate anti-phage defense in bacterial gasdermin systems.
Biorxiv, 2023
8EFM
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BU of 8efm by Molmil
Structure of coral STING receptor from Stylophora pistillata in complex with 2',3'-cGAMP
Descriptor: SULFATE ION, Stimulator of interferon genes protein, cGAMP
Authors:Li, Y, Slavik, K.M, Morehouse, B.R, Mears, K, Kranzusch, P.J.
Deposit date:2022-09-08
Release date:2023-07-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
7N51
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BU of 7n51 by Molmil
Structure of a bacterial gasdermin from Vitiosangium sp.
Descriptor: Gasdermin
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2021-06-04
Release date:2021-06-16
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Bacterial gasdermins reveal an ancient mechanism of cell death.
Science, 375, 2022
7N52
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BU of 7n52 by Molmil
Structure of a bacterial gasdermin from Runella zeae
Descriptor: Gasdermin
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2021-06-04
Release date:2021-06-23
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Bacterial gasdermins reveal an ancient mechanism of cell death.
Science, 375, 2022
7N50
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BU of 7n50 by Molmil
Structure of a bacterial gasdermin from Bradyrhizobium tropiciagri
Descriptor: Gasdermin
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2021-06-04
Release date:2021-06-23
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Bacterial gasdermins reveal an ancient mechanism of cell death.
Science, 375, 2022
8FNW
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BU of 8fnw by Molmil
Structure of RdrA-RdrB complex from Escherichia coli RADAR defense system
Descriptor: Adenosine deaminase, Archaeal ATPase, ZINC ION
Authors:Duncan-Lowey, B, Johnson, A.G, Rawson, S, Mayer, M.L, Kranzusch, P.J.
Deposit date:2022-12-28
Release date:2023-02-01
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (6.73 Å)
Cite:Cryo-EM structure of the RADAR supramolecular anti-phage defense complex.
Cell, 186, 2023
8FNU
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BU of 8fnu by Molmil
Structure of RdrA from Streptococcus suis RADAR defense system
Descriptor: KAP NTPase domain-containing protein
Authors:Duncan-Lowey, B, Johnson, A.G, Rawson, S, Mayer, M.L, Kranzusch, P.J.
Deposit date:2022-12-28
Release date:2023-02-01
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM structure of the RADAR supramolecular anti-phage defense complex.
Cell, 186, 2023
8FNT
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BU of 8fnt by Molmil
Structure of RdrA from Escherichia coli RADAR defense system
Descriptor: Archaeal ATPase
Authors:Duncan-Lowey, B, Johnson, A.G, Rawson, S, Mayer, M.L, Kranzusch, P.J.
Deposit date:2022-12-28
Release date:2023-02-01
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:Cryo-EM structure of the RADAR supramolecular anti-phage defense complex.
Cell, 186, 2023
8FNV
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BU of 8fnv by Molmil
Structure of RdrB from Escherichia coli RADAR defense system
Descriptor: Adenosine deaminase, ZINC ION
Authors:Duncan-Lowey, B, Johnson, A.G, Rawson, S, Mayer, M.L, Kranzusch, P.J.
Deposit date:2022-12-28
Release date:2023-02-01
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (2.11 Å)
Cite:Cryo-EM structure of the RADAR supramolecular anti-phage defense complex.
Cell, 186, 2023
8GJX
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BU of 8gjx by Molmil
Structure of the human STING receptor bound to 2'3'-cUA
Descriptor: 2'3'-cUA, Stimulator of interferon genes protein
Authors:Morehouse, B.R, Li, Y, Slavik, K.M, Toyoda, H, Kranzusch, P.J.
Deposit date:2023-03-16
Release date:2023-07-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8GJZ
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BU of 8gjz by Molmil
Structure of a STING receptor from S. pistillata Sp-STING1 bound to 2'3'-cUA
Descriptor: 2'3'-cUA, Stimulator of interferon genes protein
Authors:Li, Y, Toyoda, H, Slavik, K.M, Morehouse, B.R, Kranzusch, P.J.
Deposit date:2023-03-16
Release date:2023-07-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8GJY
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BU of 8gjy by Molmil
Structure of a cGAS-like receptor Sp-cGLR1 from S. pistillata
Descriptor: cGAS-like receptor 1
Authors:Li, Y, Toyoda, H, Slavik, K.M, Morehouse, B.R, Kranzusch, P.J.
Deposit date:2023-03-16
Release date:2023-07-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8GJW
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BU of 8gjw by Molmil
Structure of a cGAS-like receptor Cv-cGLR1 from C. virginica
Descriptor: SULFATE ION, cGAS-like receptor 1
Authors:Li, Y, Morehouse, B.R, Slavik, K.M, Liu, J, Toyoda, H, Kranzusch, P.J.
Deposit date:2023-03-16
Release date:2023-07-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8GBE
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BU of 8gbe by Molmil
Structure of a viral gasdermin protein A47 from Eptesipox virus
Descriptor: Protein A47
Authors:Johnson, A.G, Kranzusch, P.J.
Deposit date:2023-02-25
Release date:2023-03-15
Last modified:2023-03-22
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structural homology screens reveal poxvirus-encoded proteins impacting inflammasome-mediated defenses.
Biorxiv, 2023
7T28
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BU of 7t28 by Molmil
Structure of phage Bsp38 anti-Pycsar nuclease Apyc1 in apo state
Descriptor: Putative metal-dependent hydrolase, ZINC ION
Authors:Hobbs, S.J, Wein, T, Lu, A, Morehouse, B.R, Schnabel, J, Sorek, R, Kranzusch, P.J.
Deposit date:2021-12-03
Release date:2022-04-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Phage anti-CBASS and anti-Pycsar nucleases subvert bacterial immunity.
Nature, 605, 2022
7T27
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BU of 7t27 by Molmil
Structure of phage FBB1 anti-CBASS nuclease Acb1-3'3'-cGAMP complex in post reaction state
Descriptor: Acb1, SULFATE ION, [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-2-[[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl]oxy-sulfanyl-phosphoryl]oxymethyl]-4-oxidanyl-oxolan-3-yl]oxy-sulfanyl-phosphinic acid
Authors:Hobbs, S.J, Wein, T, Lu, A, Morehouse, B.R, Schnabel, J, Sorek, R, Kranzusch, P.J.
Deposit date:2021-12-03
Release date:2022-04-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Phage anti-CBASS and anti-Pycsar nucleases subvert bacterial immunity.
Nature, 605, 2022
7T26
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BU of 7t26 by Molmil
Structure of phage FBB1 anti-CBASS nuclease Acb1 in apo state
Descriptor: Acb1
Authors:Hobbs, S.J, Wein, T, Lu, A, Morehouse, B.R, Schnabel, J, Sorek, R, Kranzusch, P.J.
Deposit date:2021-12-03
Release date:2022-04-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Phage anti-CBASS and anti-Pycsar nucleases subvert bacterial immunity.
Nature, 605, 2022

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PDB entries from 2024-04-24

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